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MT188665.1__QJD55417.1__vBVipa4291_00004__00004
Bact-VirMT188665.1__QJD55417.1__vBVipa4291_00004__00004
Identity
- Accession:
- MT188665 ↗
- Kingdom:
- phage
Quality
91.9
mean pLDDT
Taxonomy
Loebvirae›
Hofneiviricota›
Faserviricetes›
Tubulavirales›
Inoviridae›
Versovirus›
Vibrio_phage_vB_Vipa4291
TaxID: 2729569
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-96
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2qrdB01 | 2.20.25.290 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.56 | 24.0 | 3.36e-01 | 89.5% | 94.6% |
| 2lxxA00 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.55 | 48.0 | 4.14e-01 | 98.9% | 82.2% |
| 1t3yA00 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.52 | 47.0 | 4.21e-01 | 100.0% | 78.6% |
| 8hi1E01 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 35.0 | 3.66e-01 | 71.6% | 96.6% |
| 1x99A00 | 2.60.270.20 | Mainly Beta › Sandwich › Mutm (Fpg) Protein; Chain: A, domain 2 › Cytolysin/lectin | 0.51 | 45.0 | 3.96e-01 | 98.9% | 83.4% |
| 4ffeX00 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.51 | 42.0 | 3.66e-01 | 90.5% | 77.3% |
| 1x67A01 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.51 | 45.0 | 4.05e-01 | 100.0% | 78.2% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4952123 | 3986.2.1.0 ↗ | a+b two layers › GTP-binding protein lepA C-terminal domain-like › Antitoxin Dmd › Antitoxin Dmd | 0.63 | 39.0 | 4.83e-01 | 88.4% | 100.0% |
| 3477039 | 224.1.1.1 ↗ | a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like › Cofilin_ADF | 0.57 | 50.0 | 4.50e-01 | 98.9% | 81.5% |
| 4031517 | 872.4.1.0 ↗ | a+b two layers › Dodecin subunit-like › YdgH-like › YdgH-like | 0.55 | 42.0 | 3.94e-01 | 94.7% | 65.0% |
| 3795541 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 44.0 | 4.23e-01 | 100.0% | 76.1% |
| 5049475 | 2003.6.1.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › Phos_pyr_kin | 0.52 | 41.0 | 2.91e-01 | 85.3% | 57.9% |
| 3208756 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.51 | 39.0 | 3.29e-01 | 81.1% | 86.3% |
| 3217673 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.51 | 37.0 | 3.59e-01 | 100.0% | 67.6% |
| 3256346 | 224.1.1.1 ↗ | a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like › Cofilin_ADF | 0.51 | 46.0 | 4.15e-01 | 100.0% | 79.2% |
| 4565271 | 220.1.1.71 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Inp1 | 0.51 | 41.0 | 3.76e-01 | 87.4% | 88.8% |
| 3243679 | 2484.1.1.259 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF26742 | 0.51 | 39.0 | 2.61e-01 | 84.2% | 59.5% |
| 3907235 | 4081.1.1.2 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › VIT | 0.51 | 38.0 | 2.92e-01 | 80.0% | 47.6% |
| 3723461 | 4099.1.1.9 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Med27 | 0.51 | 39.0 | 3.44e-01 | 100.0% | 54.5% |