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MT188704.1__QIV65773.1__Cp1R7AA1_205__00178

Bact-Vir

MT188704.1__QIV65773.1__Cp1R7AA1_205__00178

Identity

Accession:
MT188704 ↗
Kingdom:
phage

Quality

88.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Mesorhizobium_phage_Cp1R7A-A1

TaxID: 2723894

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 37-134
PDB
Domain cluster: rep: S27_BME27_1069154_prodigal-single.1__X__X__00299__D30-118
CATH (12)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6o38A04 2.60.120.1230 Mainly Beta › Sandwich › Jelly Rolls › 0.74 61.0 6.43e-01 91.8% 97.8%
4dnyA00 2.60.120.1230 Mainly Beta › Sandwich › Jelly Rolls › 0.69 61.0 5.92e-01 95.9% 89.0%
4m0hA01 2.60.120.1440 Mainly Beta › Sandwich › Jelly Rolls › 0.65 53.0 4.75e-01 88.8% 82.0%
1f14A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.58 43.0 3.46e-01 79.6% 57.7%
3kf8B00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.57 39.0 3.70e-01 70.4% 80.8%
1tz9A00 3.20.20.150 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes 0.54 47.0 3.27e-01 99.0% 64.1%
1ks9A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.53 44.0 3.74e-01 91.8% 98.8%
3om0A02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.52 46.0 3.97e-01 100.0% 81.9%
6d92A01 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.52 38.0 2.91e-01 78.6% 78.3%
2uxtA01 2.60.40.420 Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins 0.51 40.0 3.67e-01 86.7% 83.7%
1kblA06 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.50 35.0 3.59e-01 72.4% 94.9%
6evgA01 2.60.40.420 Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins 0.50 40.0 3.66e-01 86.7% 88.6%
ECOD (14)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3942383 520.2.1.0 ↗ beta sandwiches › gp9 N-terminal domain-like › beta-sandwich domain in metalloprotease stcE › beta-sandwich domain in metalloprotease stcE 0.87 71.0 7.43e-01 85.7% 95.6%
185692 520.2.1.1 ↗ beta sandwiches › gp9 N-terminal domain-like › beta-sandwich domain in metalloprotease stcE › beta-sandwich domain in metalloprotease stcE › StcE_b-sandwich 0.69 61.0 5.92e-01 95.9% 89.0%
4561709 520.2.1.1 ↗ beta sandwiches › gp9 N-terminal domain-like › beta-sandwich domain in metalloprotease stcE › beta-sandwich domain in metalloprotease stcE › StcE_b-sandwich 0.69 55.0 5.75e-01 86.7% 98.9%
4026698 12.1.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.66 43.0 4.78e-01 94.9% 85.3%
4253059 207.11.1.1 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD 0.64 53.0 3.92e-01 90.8% 61.9%
4058118 207.11.1.1 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD 0.60 54.0 3.95e-01 100.0% 87.9%
4878623 3156.1.1.9 ↗ beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related › Cu-oxidase_3 0.59 41.0 3.62e-01 71.4% 67.6%
5012068 3156.1.1.0 ↗ beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related 0.56 41.0 3.53e-01 76.5% 70.0%
2775473 12.6.1.6 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycoside hydrolase family 127 middle domain-related › Glycoside hydrolase family 127 middle domain-related › Glyco_hydro_95_C 0.56 43.0 4.55e-01 83.7% 100.0%
3783981 2.1.1.59 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ten1 0.55 38.0 3.53e-01 71.4% 81.6%
3429983 12.1.1.36 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › GHD 0.55 41.0 4.02e-01 78.6% 73.3%
3830978 11.10.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like 0.54 41.0 3.87e-01 81.6% 85.8%
4949569 4312.1.1.3 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.52 30.0 3.12e-01 83.7% 61.1%
5080208 4312.1.1.3 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.51 27.0 2.88e-01 83.7% 55.6%
D2 high residues 212-306
PDB
Domain cluster: rep: OV032902.1__CAH0447963.1__SM033_00139__00139__D168-264