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MT188704.1__QIV65783.1__Cp1R7AA1_144__00117

Bact-Vir

MT188704.1__QIV65783.1__Cp1R7AA1_144__00117

Identity

Accession:
MT188704 ↗
Kingdom:
phage

Quality

91.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Mesorhizobium_phage_Cp1R7A-A1

TaxID: 2723894

Cluster

View cluster (5 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-175
PDB
Domain cluster: representative
CATH (12)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2gz4A00 1.10.3210.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 0.86 80.0 7.50e-01 100.0% 82.5%
5tk8A00 1.10.3210.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 0.77 66.0 6.38e-01 89.6% 95.8%
1xx7A00 1.10.3210.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 0.74 63.0 6.41e-01 89.0% 98.3%
2paqA00 1.10.3210.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 0.74 64.0 6.39e-01 90.2% 98.9%
1ynbA00 1.10.3210.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 0.73 66.0 6.76e-01 96.0% 98.2%
3u1nB01 1.10.3210.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 0.71 60.0 4.72e-01 87.9% 57.9%
4dmbB00 1.10.3210.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 0.70 63.0 6.11e-01 94.8% 91.1%
3kh1A00 1.10.3210.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 0.69 58.0 5.60e-01 89.0% 89.7%
3ccgA00 1.10.3210.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 0.61 49.0 4.73e-01 87.9% 75.1%
7qocA01 1.10.3210.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 0.58 49.0 4.75e-01 87.3% 90.4%
3nz4B03 1.10.274.20 Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Phenylalanine ammonia-lyase 1; domain 3 0.56 34.0 4.18e-01 70.5% 100.0%
2mx8A01 1.10.274.70 Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Spidroin, N-terminal domain 0.54 32.0 3.86e-01 75.1% 88.5%
ECOD (34)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4010813 131.1.1.0 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like 0.89 73.0 7.42e-01 98.3% 85.3%
4790 131.1.1.0 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like 0.86 80.0 7.50e-01 100.0% 82.5%
4183693 131.1.1.3 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD 0.86 79.0 7.57e-01 100.0% 84.6%
3386221 131.1.1.10 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD_3 0.78 68.0 6.13e-01 90.2% 98.2%
5079110 131.1.1.10 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD_3 0.77 67.0 6.44e-01 89.0% 96.8%
1919141 131.1.1.9 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › YfbR-like 0.77 66.0 6.36e-01 89.0% 95.8%
4039998 131.1.1.9 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › YfbR-like 0.77 67.0 6.38e-01 90.2% 94.4%
5024310 131.1.1.10 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD_3 0.77 65.0 6.48e-01 88.4% 97.2%
4944097 131.1.1.10 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD_3 0.76 65.0 6.04e-01 89.0% 92.9%
4976483 131.1.1.10 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD_3 0.76 65.0 6.24e-01 89.6% 99.0%
5065369 131.1.1.10 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD_3 0.75 65.0 6.26e-01 89.6% 91.6%
5011113 131.1.1.10 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD_3 0.74 64.0 6.44e-01 89.6% 100.0%
4993560 131.1.1.10 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD_3 0.74 64.0 6.28e-01 89.6% 98.9%
5006579 131.1.1.10 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD_3 0.73 66.0 6.71e-01 96.0% 95.3%
5083274 131.1.1.0 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like 0.73 62.0 4.53e-01 87.3% 47.1%
4011494 131.1.1.0 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like 0.71 64.0 6.24e-01 94.8% 96.8%
3839885 131.1.1.10 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD_3 0.71 66.0 6.14e-01 97.1% 99.5%
3597759 131.1.1.10 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD_3 0.71 64.0 6.09e-01 94.8% 89.0%
2721361 131.1.1.10 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD_3 0.71 64.0 6.42e-01 94.8% 100.0%
4969504 131.1.1.0 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like 0.69 54.0 5.43e-01 80.9% 92.6%
4049639 131.1.1.24 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › tRNA_synt_2f 0.69 62.0 5.22e-01 94.2% 67.4%
4946156 131.1.1.0 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like 0.68 58.0 5.03e-01 88.4% 86.8%
4938333 131.1.1.3 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD 0.66 60.0 5.92e-01 95.4% 100.0%
3672034 131.1.1.24 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › tRNA_synt_2f 0.65 54.0 5.59e-01 89.0% 92.1%
5048000 131.1.1.3 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD 0.64 54.0 5.28e-01 87.3% 89.7%
5016020 131.1.1.3 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD 0.64 54.0 5.37e-01 87.9% 95.6%
3941994 131.1.1.3 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD 0.63 53.0 5.19e-01 88.4% 88.9%
5065754 131.1.1.3 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD 0.61 54.0 4.78e-01 95.4% 89.2%
3941077 106.1.1.0 ↗ alpha arrays › Globin-like › Globin-like › Globin-like 0.58 37.0 4.07e-01 77.5% 78.6%
3658080 101.1.10.1 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N 0.57 34.0 3.53e-01 88.4% 60.0%
3699385 141.1.1.1 ↗ alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › polyprenyl_synt 0.54 46.0 3.57e-01 91.3% 87.1%
3971666 131.2.1.0 ↗ alpha complex topology › PDEase-like › Poly A polymerase C-terminal region-like › Poly A polymerase C-terminal region-like 0.53 47.0 4.04e-01 97.1% 76.4%
4444031 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.53 47.0 3.76e-01 97.1% 60.9%
4422095 131.2.1.5 ↗ alpha complex topology › PDEase-like › Poly A polymerase C-terminal region-like › Poly A polymerase C-terminal region-like › HD, PF27444 0.52 46.0 3.87e-01 97.7% 80.0%
D2 medium residues 176-243
PDB
Domain cluster: representative
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3osgA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.60 41.0 4.37e-01 82.4% 81.7%
1irzA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.55 37.0 3.77e-01 70.6% 78.1%
5dvyA01 3.10.450.100 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › NTF2-like; domain 1 0.54 44.0 3.64e-01 91.2% 75.4%
2dt5B01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 44.0 4.35e-01 92.6% 95.9%
2mjmA00 1.10.533.20 Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › 0.53 37.0 3.32e-01 75.0% 52.5%
3keoA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 40.0 3.94e-01 85.3% 98.6%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4133453 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.65 48.0 5.19e-01 79.4% 100.0%
4017353 109.4.1.17 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Cullin 0.60 42.0 2.55e-01 75.0% 24.0%
None — 0.59 44.0 4.34e-01 82.4% 92.0%
4552261 149.1.1.1 ↗ alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450 0.56 46.0 2.86e-01 100.0% 87.1%