←Back to structures

MT188704.1__QIV65784.1__Cp1R7AA1_198__00171

Bact-Vir

MT188704.1__QIV65784.1__Cp1R7AA1_198__00171

Identity

Accession:
MT188704 ↗
Kingdom:
phage

Quality

83.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Mesorhizobium_phage_Cp1R7A-A1

TaxID: 2723894

Cluster

View cluster (22 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 24-90
PDB
Domain cluster: rep: ON464759.1__UTV60862.1__JDFnp1_74__00074__D5-72
Pfam (3)
AccessionNameScoreE-valueQ covHMM cov
PF13560.13 best HTH_31 41.6 1.70e-10 89.5% 92.2%
PF12844.14 HTH_19 44.2 2.10e-11 88.1% 92.2%
PF01381.29 HTH_3 51.6 1.00e-13 82.1% 100.0%
D2 high residues 102-223
PDB
Domain cluster: rep: MK448705.1__QBX15854.1__Javan215_0051__00005__D138-257
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2fjrA02 2.10.109.10 Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A 0.83 67.0 7.02e-01 100.0% 91.2%
3k2zA02 2.10.109.10 Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A 0.81 73.0 7.44e-01 95.9% 97.5%
1ay9A00 2.10.109.10 Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A 0.80 62.0 6.55e-01 82.8% 90.7%
1f39A00 2.10.109.10 Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A 0.77 56.0 6.09e-01 74.6% 93.1%
2ekhA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.54 29.0 3.54e-01 73.0% 80.0%
1vjvA01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.50 36.0 2.74e-01 74.6% 49.2%
ECOD (30)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3164339 4.11.1.1 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 0.84 79.0 7.22e-01 100.0% 87.0%
2772566 4.11.1.3 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Phage_CI_C 0.83 68.0 7.01e-01 100.0% 90.4%
4525683 4.11.1.3 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Phage_CI_C 0.83 68.0 6.93e-01 100.0% 88.1%
3963450 4.11.1.1 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 0.82 77.0 7.46e-01 100.0% 98.5%
3976863 4.11.1.3 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Phage_CI_C 0.82 66.0 7.10e-01 98.4% 97.1%
3970039 4.11.1.0 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase 0.82 78.0 7.37e-01 100.0% 97.1%
3965029 4.11.1.1 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 0.82 77.0 7.33e-01 100.0% 93.6%
3942297 4.11.1.3 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Phage_CI_C 0.82 66.0 6.91e-01 100.0% 92.0%
3963760 4.11.1.1 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 0.81 76.0 7.13e-01 100.0% 93.0%
4493478 4.11.1.1 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 0.80 76.0 7.42e-01 100.0% 95.4%
4987744 4.11.1.0 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase 0.79 56.0 5.40e-01 72.1% 74.1%
4071971 4.11.1.1 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 0.79 74.0 6.96e-01 100.0% 83.4%
4938445 4.11.1.2 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 0.79 56.0 5.46e-01 73.8% 75.6%
4036705 4.11.1.1 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 0.79 74.0 7.17e-01 100.0% 90.4%
3980359 4.11.1.1 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 0.77 72.0 6.87e-01 100.0% 95.7%
3974846 4.11.1.1 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 0.77 61.0 6.45e-01 82.8% 92.7%
4646593 4.11.1.1 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 0.75 70.0 6.79e-01 100.0% 94.1%
3964944 4.11.1.1 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 0.75 69.0 6.63e-01 100.0% 97.9%
4949773 4.11.1.0 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase 0.75 54.0 5.07e-01 73.8% 62.1%
4007999 4.11.1.1 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 0.75 70.0 6.79e-01 100.0% 93.3%
4952498 4.11.1.1 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 0.75 53.0 5.87e-01 73.0% 100.0%
5014946 4.11.1.1 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 0.67 59.0 5.77e-01 100.0% 87.7%
4300895 4.11.1.6 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › PF31032 0.66 57.0 5.43e-01 98.4% 79.3%
1323508 4.11.1.2 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 0.65 56.0 5.33e-01 90.2% 96.4%
3266698 4.11.1.2 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 0.63 58.0 5.59e-01 99.2% 88.9%
4097843 4.11.1.6 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › PF31032 0.61 57.0 5.15e-01 99.2% 83.1%
3765007 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.57 31.0 4.05e-01 73.0% 94.3%
3899829 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.56 32.0 3.97e-01 74.6% 90.7%
3771485 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.55 31.0 4.00e-01 75.4% 97.1%
3237262 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.55 41.0 4.28e-01 77.0% 90.0%