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MT188704.1__QIV65799.1__Cp1R7AA1_038__00038

Bact-Vir

MT188704.1__QIV65799.1__Cp1R7AA1_038__00038

Identity

Accession:
MT188704 ↗
Kingdom:
phage

Quality

87.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Mesorhizobium_phage_Cp1R7A-A1

TaxID: 2723894

Cluster

View cluster (6 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 12-112
PDB
Domain cluster: representative
CATH (28)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4eekA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.70 45.0 5.28e-01 95.0% 100.0%
3lcnB00 1.10.340.40 Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Nuclear abundant poly(A) RNA-bind protein 2, N-terminal domain 0.69 51.0 5.21e-01 97.0% 81.4%
1u84A00 1.10.340.20 Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Apc36109-like domain 0.65 47.0 5.15e-01 95.0% 95.1%
1sqgA01 1.10.940.10 Mainly Alpha › Orthogonal Bundle › N-utilizing Substance Protein B Homolog; Chain A › NusB-like 0.60 47.0 4.24e-01 100.0% 61.0%
3tjmA02 1.10.1470.20 Mainly Alpha › Orthogonal Bundle › Protein Yjbj; Chain: A; › Fatty acid synthase; domain 2 0.60 42.0 4.38e-01 95.0% 81.1%
2pkeA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.59 43.0 4.80e-01 95.0% 100.0%
1abvA00 1.10.520.20 Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › N-terminal domain of the delta subunit of the F1F0-ATP synthase 0.58 43.0 4.32e-01 80.2% 80.0%
3r2cA00 1.10.940.10 Mainly Alpha › Orthogonal Bundle › N-utilizing Substance Protein B Homolog; Chain A › NusB-like 0.58 38.0 3.48e-01 83.2% 49.3%
6iy9A01 3.90.1200.10 Alpha Beta › Alpha-Beta Complex › Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2 › Aminoglycoside phosphotransferase (APH), C-terminal lobe 0.58 44.0 3.57e-01 81.2% 67.7%
4akgA06 1.10.8.710 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Dynein motor, AAA1 domain, small subdomain 0.57 44.0 4.40e-01 84.2% 82.2%
1uaaA02 1.10.10.160 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.57 40.0 4.44e-01 94.1% 100.0%
1cqxA01 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.56 46.0 4.06e-01 89.1% 68.0%
1f5oA00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.56 45.0 4.03e-01 88.1% 71.1%
4bbrM00 1.10.472.170 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › 0.56 40.0 3.30e-01 84.2% 39.4%
3hyuA00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.55 47.0 4.23e-01 95.0% 69.5%
1gcvB00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.55 45.0 4.13e-01 92.1% 72.1%
1i36A02 1.10.1040.10 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.55 33.0 3.37e-01 97.0% 60.6%
3fseB02 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.54 46.0 4.11e-01 94.1% 84.0%
6wk3A00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.54 43.0 3.89e-01 88.1% 67.6%
2kvsA00 1.10.150.260 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › YozE SAM-like 0.54 38.0 4.09e-01 87.1% 92.5%
2xzmV01 1.10.60.20 Mainly Alpha › Orthogonal Bundle › Diphtheria Toxin Repressor; domain 2 › Ribosomal protein S17 0.53 32.0 3.70e-01 85.1% 95.1%
3f4mA00 1.20.1440.160 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Tumor necrosis factor alpha-induced protein 8-like 0.53 43.0 3.84e-01 92.1% 99.4%
6vw7B03 1.20.1440.230 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain 0.52 41.0 4.40e-01 94.1% 100.0%
1gcvA00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.52 44.0 4.05e-01 96.0% 70.7%
2bbrA02 1.10.533.10 Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas 0.52 42.0 4.31e-01 90.1% 96.0%
1h99A02 1.10.1790.10 Mainly Alpha › Orthogonal Bundle › PTS-regulatory domain, PRD › PRD domain 0.51 41.0 4.09e-01 91.1% 83.0%
2ib0A01 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.50 42.0 3.92e-01 95.0% 85.9%
7p5hB03 1.20.1440.230 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain 0.50 40.0 4.19e-01 97.0% 97.8%
ECOD (15)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3468254 592.2.1.0 ↗ alpha arrays › PWI domain-like › YugE-like › YugE-like 0.72 48.0 5.55e-01 92.1% 97.1%
167309 592.2.1.3 ↗ alpha arrays › PWI domain-like › YugE-like › YugE-like › Nab2 0.68 50.0 4.98e-01 98.0% 75.2%
4003104 148.1.3.24 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_7 0.64 49.0 4.93e-01 84.2% 81.0%
4027714 592.2.1.2 ↗ alpha arrays › PWI domain-like › YugE-like › YugE-like › WGG 0.62 54.0 5.25e-01 97.0% 89.1%
3517207 4218.1.1.1 ↗ alpha bundles › TAFH domain-like › TAFH domain-like › TAFH domain-like › TAFH 0.61 45.0 4.73e-01 93.1% 87.8%
4871777 106.1.1.1 ↗ alpha arrays › Globin-like › Globin-like › Globin-like › Globin 0.57 50.0 4.42e-01 96.0% 71.8%
4260399 106.1.1.1 ↗ alpha arrays › Globin-like › Globin-like › Globin-like › Globin 0.56 49.0 4.37e-01 97.0% 72.4%
3428312 632.15.1.5 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Staphylococcal complement inhibitor (SCIN) › Staphylococcal complement inhibitor (SCIN) › Rx_N 0.56 38.0 3.34e-01 70.3% 89.4%
4011431 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.56 38.0 3.74e-01 70.3% 70.9%
53225 129.1.1.0 ↗ alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like 0.55 33.0 3.32e-01 94.1% 56.6%
3508 129.1.1.12 ↗ alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › DUF1932 0.54 33.0 3.27e-01 95.0% 56.6%
3990120 162.1.1.1 ↗ alpha bundles › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD › PRD 0.53 41.0 4.14e-01 91.1% 81.6%
4150329 563.1.1.1 ↗ alpha bundles › ATPD N-terminal domain-like › N-terminal domain of the delta subunit of the F1F0-ATP synthase › N-terminal domain of the delta subunit of the F1F0-ATP synthase › OSCP 0.52 37.0 3.35e-01 75.2% 55.2%
4411140 563.1.1.1 ↗ alpha bundles › ATPD N-terminal domain-like › N-terminal domain of the delta subunit of the F1F0-ATP synthase › N-terminal domain of the delta subunit of the F1F0-ATP synthase › OSCP 0.51 42.0 4.32e-01 92.1% 97.9%
3283708 1075.4.1.38 ↗ alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › AI-2E_transport 0.51 43.0 3.35e-01 99.0% 52.8%
D2 high residues 127-173
PDB
Domain cluster: rep: MT270409.1__QJA43013.1__X__00071__D115-161
CATH (87)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4a4kA02 2.30.30.1160 Mainly Beta › Roll › SH3 type barrels. › 0.92 84.0 5.88e-01 100.0% 60.2%
2xk0A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.91 78.0 6.79e-01 100.0% 63.8%
2mamA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.87 78.0 5.73e-01 100.0% 80.5%
2eqjA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.87 75.0 6.73e-01 100.0% 69.7%
3lx7A01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.85 68.0 6.90e-01 100.0% 89.1%
6my0A02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.84 75.0 6.73e-01 100.0% 72.3%
3p8bB02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.83 76.0 6.89e-01 100.0% 79.0%
4n4iA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.83 73.0 5.85e-01 100.0% 51.1%
3oymA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.83 74.0 6.46e-01 100.0% 72.9%
2mysA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.83 69.0 6.92e-01 100.0% 91.7%
7xpkA01 2.30.30.490 Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain 0.83 74.0 5.14e-01 100.0% 51.7%
2digA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.82 72.0 6.38e-01 100.0% 69.1%
1mhnA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.81 71.0 6.63e-01 100.0% 81.4%
3j7aF03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.80 72.0 6.24e-01 100.0% 69.0%
4dapA01 2.40.50.580 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.80 60.0 4.98e-01 80.9% 82.5%
2d9tA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.80 70.0 6.99e-01 100.0% 98.0%
2ct4A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.79 68.0 6.05e-01 100.0% 80.0%
2fhdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.78 69.0 6.33e-01 100.0% 83.9%
4b9wA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.78 68.0 6.49e-01 100.0% 83.9%
2eqmA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.78 66.0 6.42e-01 100.0% 96.2%
4ii1A02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.78 67.0 6.34e-01 100.0% 82.1%
1jegA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.77 68.0 6.28e-01 100.0% 93.3%
5kcoA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.77 66.0 6.14e-01 97.9% 79.7%
2ldmA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.77 64.0 6.24e-01 100.0% 84.9%
2rcnA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.76 61.0 5.58e-01 87.2% 95.1%
4krtB03 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.76 66.0 5.95e-01 100.0% 98.5%
2heqA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.76 66.0 6.37e-01 100.0% 98.1%
3teeA02 2.30.30.760 Mainly Beta › Roll › SH3 type barrels. › 0.76 66.0 5.69e-01 97.9% 68.5%
2gfaB01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.76 66.0 6.06e-01 100.0% 79.0%
1quqB00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.76 59.0 4.48e-01 87.2% 59.6%
4a53A01 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.75 64.0 5.92e-01 100.0% 75.8%
2dl5A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.75 64.0 5.50e-01 100.0% 71.8%
1vwxA02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.74 63.0 5.37e-01 100.0% 68.8%
3npfB01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.73 64.0 5.76e-01 100.0% 90.9%
2haxA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.73 51.0 5.27e-01 74.5% 81.4%
2fb7A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.72 61.0 5.26e-01 100.0% 83.7%
2vknA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.72 63.0 5.68e-01 100.0% 84.8%
2kcmA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.72 49.0 4.28e-01 72.3% 87.8%
1y96D00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.72 61.0 5.15e-01 100.0% 62.7%
2k5nA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.71 50.0 4.36e-01 76.6% 48.6%
1zq1A01 2.30.30.520 Mainly Beta › Roll › SH3 type barrels. › 0.71 60.0 5.18e-01 100.0% 67.5%
2wfwB02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.70 57.0 5.06e-01 89.4% 92.5%
2akkA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.70 59.0 5.20e-01 100.0% 74.3%
2hbpA00 2.30.30.700 Mainly Beta › Roll › SH3 type barrels. › SLA1 homology domain 1 0.70 61.0 5.46e-01 100.0% 71.2%
2ou5A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.69 56.0 3.84e-01 93.6% 68.6%
7z0kB01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.69 57.0 5.32e-01 100.0% 92.2%
2k57A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.67 57.0 5.48e-01 100.0% 85.5%
4q66D01 6.20.120.50 Special › Other non-globular › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.67 48.0 4.19e-01 76.6% 57.5%
2e5wA01 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.66 53.0 5.10e-01 93.6% 87.5%
2dk7A00 2.20.70.10 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › 0.66 46.0 4.10e-01 76.6% 54.8%
1awjA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.65 54.0 4.72e-01 100.0% 72.7%
3oyyA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.65 47.0 4.33e-01 80.9% 95.4%
2ra2B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.65 55.0 5.22e-01 100.0% 81.0%
4oonA03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.64 57.0 4.42e-01 100.0% 95.2%
4mi7A00 3.90.70.170 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › 0.64 56.0 4.12e-01 100.0% 37.9%
3udfA03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.64 56.0 4.47e-01 100.0% 95.8%
3h8lA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.63 56.0 3.63e-01 100.0% 49.8%
5x68A00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.63 55.0 3.24e-01 95.7% 40.8%
4oijA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.62 49.0 4.33e-01 89.4% 64.8%
2qf4A02 2.40.10.350 Mainly Beta › Beta Barrel › Thrombin, subunit H › Rod shape-determining protein MreC, domain 2 0.62 48.0 4.05e-01 91.5% 86.8%
3odtA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.62 52.0 3.17e-01 95.7% 19.3%
3htyA00 2.40.128.280 Mainly Beta › Beta Barrel › Lipocalin › 0.61 49.0 3.96e-01 89.4% 47.9%
4k22B01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.61 49.0 3.16e-01 95.7% 51.0%
2i9yA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.61 48.0 3.45e-01 93.6% 59.2%
2yf0A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.61 51.0 4.28e-01 100.0% 79.3%
1hyuA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.60 48.0 3.33e-01 95.7% 57.1%
3kbgA02 2.40.50.740 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Ribosomal protein S4, central domain 0.60 41.0 4.04e-01 74.5% 98.1%
4ld1A00 2.60.450.20 Mainly Beta › Sandwich › lipopolysaccharide transport protein A fold › 0.59 38.0 2.70e-01 89.4% 19.7%
5nahA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.59 51.0 3.06e-01 100.0% 41.5%
3ml4C01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.58 47.0 3.80e-01 100.0% 78.7%
2vouB01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.58 46.0 3.02e-01 93.6% 64.2%
4k7zA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.58 48.0 3.15e-01 95.7% 60.7%
2q0lA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.58 46.0 3.19e-01 95.7% 55.1%
1y13A00 3.30.479.10 Alpha Beta › 2-Layer Sandwich › Tetrahydropterin Synthase; Chain A › 6-pyruvoyl tetrahydropterin synthase/QueD 0.57 43.0 3.12e-01 89.4% 57.1%
3luuA00 3.30.2020.30 Alpha Beta › 2-Layer Sandwich › NE0471 N-terminal domain-like › 0.57 47.0 3.95e-01 100.0% 85.4%
5xpyA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 46.0 3.68e-01 95.7% 58.3%
2b3yA05 3.20.19.10 Alpha Beta › Alpha-Beta Barrel › Aconitase; domain 4 › Aconitase, domain 4 0.56 44.0 2.91e-01 91.5% 86.8%
2bwnB01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.56 47.0 3.30e-01 97.9% 63.5%
2a6hC05 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.56 46.0 3.98e-01 93.6% 78.7%
3rp7A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.56 43.0 3.11e-01 95.7% 39.9%
3kyfA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.55 45.0 3.58e-01 100.0% 80.7%
2x5cA01 3.30.70.3590 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.55 45.0 3.78e-01 100.0% 60.4%
4geqB00 3.30.160.430 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.54 40.0 3.81e-01 100.0% 69.0%
1hlcA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.53 45.0 3.39e-01 100.0% 78.3%
2hqvA00 3.40.1570.10 Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › HemS/ChuS/ChuX like domains 0.53 43.0 2.97e-01 93.6% 70.3%
2oviA00 3.40.1570.10 Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › HemS/ChuS/ChuX like domains 0.53 40.0 3.04e-01 100.0% 51.3%
6j5cA02 3.30.67.10 Alpha Beta › 2-Layer Sandwich › Viral Envelope Glycoprotein; domain 2 › Viral Envelope Glycoprotein, domain 2 0.52 42.0 3.65e-01 100.0% 68.7%
ECOD (100)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3533770 4.1.1.101 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_2 0.93 84.0 6.31e-01 100.0% 43.8%
3558188 4.1.1.101 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_2 0.93 83.0 7.00e-01 100.0% 61.3%
3850775 4.1.1.101 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_2 0.92 83.0 7.39e-01 100.0% 70.8%
3737903 4.1.1.286 ↗ beta barrels › SH3 › SH3 › SH3 › DUF7072 0.92 82.0 7.73e-01 97.9% 81.8%
3609527 2006.1.1.4 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › NIF 0.89 74.0 4.71e-01 93.6% 20.5%
3270324 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.88 80.0 7.90e-01 100.0% 94.0%
145285 4.1.1.66 ↗ beta barrels › SH3 › SH3 › SH3 › LBR_tudor 0.87 77.0 6.91e-01 100.0% 71.2%
3901117 4.8.1.6 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.87 79.0 5.15e-01 100.0% 30.0%
3419491 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.87 79.0 7.24e-01 100.0% 85.0%
3486496 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.86 77.0 7.29e-01 100.0% 83.6%
3476178 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.86 77.0 5.61e-01 100.0% 38.3%
4998329 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.86 70.0 6.61e-01 100.0% 74.5%
4268386 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.86 78.0 6.74e-01 100.0% 68.6%
3405627 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.85 76.0 5.98e-01 100.0% 50.5%
3421158 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.85 75.0 6.94e-01 100.0% 80.0%
3372243 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.84 74.0 6.23e-01 100.0% 60.0%
3607985 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.84 75.0 5.72e-01 100.0% 47.6%
4091533 4.1.1.58 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_3 0.84 75.0 6.55e-01 100.0% 91.4%
3706223 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.84 75.0 5.72e-01 100.0% 47.6%
3780847 4.1.1.187 ↗ beta barrels › SH3 › SH3 › SH3 › DIRP 0.84 76.0 5.21e-01 100.0% 33.3%
3584571 4.1.1.56 ↗ beta barrels › SH3 › SH3 › SH3 › RBB1NT 0.84 72.0 4.52e-01 100.0% 19.1%
3936885 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.83 74.0 6.66e-01 100.0% 73.8%
3587337 4.11.1.2 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 0.83 75.0 5.18e-01 100.0% 33.3%
4105328 4.1.1.43 ↗ beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.83 74.0 6.64e-01 100.0% 73.8%
3300074 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.83 72.0 6.89e-01 100.0% 85.2%
3706786 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.83 76.0 6.39e-01 100.0% 64.0%
3475240 4.1.1.304 ↗ beta barrels › SH3 › SH3 › SH3 › SH3-C_UBE2O 0.82 72.0 6.88e-01 97.9% 89.1%
3450200 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.82 71.0 5.90e-01 100.0% 56.5%
4966163 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.82 72.0 6.20e-01 100.0% 62.7%
3764432 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.82 69.0 6.25e-01 100.0% 69.2%
3238405 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.82 72.0 6.87e-01 100.0% 83.6%
3834390 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.82 69.0 6.86e-01 97.9% 94.0%
3497365 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.82 72.0 6.86e-01 100.0% 92.7%
3834303 109.4.1.257 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PDS5 0.82 70.0 4.03e-01 100.0% 10.5%
3475919 4.1.1.239 ↗ beta barrels › SH3 › SH3 › SH3 › SH3-B_UBE2O 0.82 74.0 4.35e-01 100.0% 15.4%
3368254 4.1.1.141 ↗ beta barrels › SH3 › SH3 › SH3 › PTM_DIR17_Tudor 0.81 70.0 6.75e-01 100.0% 87.3%
3475462 4.1.1.304 ↗ beta barrels › SH3 › SH3 › SH3 › SH3-C_UBE2O 0.81 73.0 5.93e-01 100.0% 58.8%
4302391 4.1.1.398 ↗ beta barrels › SH3 › SH3 › SH3 › YolD 0.81 71.0 6.41e-01 100.0% 84.6%
3329059 4.1.1.141 ↗ beta barrels › SH3 › SH3 › SH3 › PTM_DIR17_Tudor 0.81 70.0 6.89e-01 100.0% 96.0%
3303889 4.1.1.141 ↗ beta barrels › SH3 › SH3 › SH3 › PTM_DIR17_Tudor 0.81 69.0 6.01e-01 100.0% 64.0%
3342430 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.80 69.0 5.99e-01 100.0% 64.0%
3546309 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.80 71.0 6.07e-01 100.0% 74.7%
4882420 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.80 65.0 6.34e-01 95.7% 82.4%
3243188 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.80 71.0 6.05e-01 100.0% 82.7%
4120629 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.79 70.0 6.00e-01 100.0% 68.0%
3741878 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.79 69.0 6.24e-01 100.0% 89.2%
3676844 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.79 67.0 5.86e-01 100.0% 64.0%
4028871 2.1.1.10 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.79 57.0 4.96e-01 78.7% 84.9%
3173941 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.79 70.0 5.35e-01 100.0% 46.0%
3818428 4.1.1.66 ↗ beta barrels › SH3 › SH3 › SH3 › LBR_tudor 0.79 68.0 5.89e-01 100.0% 65.3%
3484007 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.79 69.0 6.05e-01 100.0% 80.0%
3485745 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.78 69.0 6.38e-01 100.0% 93.3%
2427475 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.78 69.0 6.10e-01 100.0% 68.7%
2727964 4.1.1.105 ↗ beta barrels › SH3 › SH3 › SH3 › DUF5604 0.78 67.0 6.31e-01 100.0% 81.4%
3529708 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.78 68.0 5.86e-01 100.0% 74.7%
4034320 4.1.1.398 ↗ beta barrels › SH3 › SH3 › SH3 › YolD 0.78 68.0 6.04e-01 100.0% 82.4%
3554026 4.1.1.233 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_VII_N 0.78 67.0 6.27e-01 100.0% 85.0%
3553983 4.1.1.233 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_VII_N 0.78 68.0 6.28e-01 100.0% 85.0%
4238582 3174.2.1.1 ↗ beta barrels › Ribosomal protein L14-like › Barrel domain in flagellar protein FlgA › Barrel domain in flagellar protein FlgA › ChapFlgA 0.78 68.0 6.27e-01 97.9% 83.3%
3917372 4.1.1.101 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_2 0.78 68.0 5.86e-01 100.0% 64.0%
3213114 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.78 68.0 5.51e-01 100.0% 70.0%
3702154 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.77 67.0 5.77e-01 100.0% 66.7%
4001172 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.77 67.0 5.94e-01 100.0% 81.4%
3581336 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.77 67.0 5.13e-01 100.0% 50.9%
4157193 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.76 67.0 5.88e-01 100.0% 71.4%
4432457 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.76 66.0 5.82e-01 100.0% 68.6%
3448975 4.1.1.66 ↗ beta barrels › SH3 › SH3 › SH3 › LBR_tudor 0.76 65.0 5.92e-01 100.0% 86.2%
4122525 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.76 65.0 5.67e-01 100.0% 70.7%
3782038 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.76 65.0 5.11e-01 100.0% 46.0%
4226849 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.76 65.0 5.54e-01 100.0% 61.3%
3824346 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 65.0 5.51e-01 100.0% 61.3%
3301015 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 64.0 5.83e-01 100.0% 86.2%
3423337 4.1.1.141 ↗ beta barrels › SH3 › SH3 › SH3 › PTM_DIR17_Tudor 0.75 64.0 5.45e-01 100.0% 60.0%
5028741 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 65.0 6.25e-01 100.0% 87.3%
185635 4.1.1.391 ↗ beta barrels › SH3 › SH3 › SH3 › FDF, PF30873 0.75 64.0 4.81e-01 100.0% 38.8%
858452 4.1.1.476 ↗ beta barrels › SH3 › SH3 › SH3 › PF30873 0.74 64.0 5.13e-01 100.0% 49.0%
2127495 4.1.1.38 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L2_C 0.74 64.0 4.46e-01 100.0% 34.2%
4998113 4.1.1.28 ↗ beta barrels › SH3 › SH3 › SH3 › BPL_C 0.74 62.0 6.33e-01 100.0% 100.0%
5080336 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.74 63.0 5.76e-01 100.0% 78.1%
5000741 4.17.1.1 ↗ beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.73 62.0 5.64e-01 100.0% 70.8%
1031172 4.1.1.113 ↗ beta barrels › SH3 › SH3 › SH3 › TraI_2B 0.73 64.0 5.57e-01 100.0% 69.4%
4940710 3174.2.1.0 ↗ beta barrels › Ribosomal protein L14-like › Barrel domain in flagellar protein FlgA › Barrel domain in flagellar protein FlgA 0.73 64.0 5.79e-01 100.0% 90.8%
4554867 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.73 62.0 5.60e-01 100.0% 70.8%
4187800 4.1.1.39 ↗ beta barrels › SH3 › SH3 › SH3 › SHD1 0.73 59.0 5.55e-01 97.9% 73.3%
4071824 4.17.1.1 ↗ beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.72 61.0 5.32e-01 100.0% 69.3%
5053906 4.17.1.1 ↗ beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.72 61.0 5.73e-01 100.0% 81.7%
3940729 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 60.0 5.06e-01 100.0% 60.0%
4505316 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 62.0 5.76e-01 100.0% 81.7%
5050320 4.17.1.1 ↗ beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.71 61.0 5.27e-01 100.0% 64.0%
4971470 4.17.1.1 ↗ beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.70 60.0 5.19e-01 100.0% 64.0%
3511278 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 57.0 5.10e-01 100.0% 64.3%
5056826 4.17.1.1 ↗ beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.69 58.0 5.35e-01 100.0% 73.8%
3300051 4.1.1.141 ↗ beta barrels › SH3 › SH3 › SH3 › PTM_DIR17_Tudor 0.68 58.0 5.04e-01 100.0% 62.7%
3277860 4.1.1.368 ↗ beta barrels › SH3 › SH3 › SH3 › DUF3097_N 0.68 57.0 5.22e-01 100.0% 75.4%
3660244 4.1.1.141 ↗ beta barrels › SH3 › SH3 › SH3 › PTM_DIR17_Tudor 0.67 57.0 4.99e-01 100.0% 66.7%
3660755 4.8.1.21 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › PTM_DIR17_Tudor 0.67 58.0 5.01e-01 100.0% 65.3%
3301383 4.1.1.141 ↗ beta barrels › SH3 › SH3 › SH3 › PTM_DIR17_Tudor 0.65 55.0 5.44e-01 97.9% 92.0%
3549024 2003.1.2.16 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3,NAD_binding_8 0.64 57.0 3.28e-01 95.7% 34.1%
1144780 219.1.1.69 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › GtgE 0.64 56.0 4.12e-01 100.0% 37.9%
3991018 708.1.1.16 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › RYYR-CCHC 0.60 47.0 4.09e-01 93.6% 78.8%