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MT188704.1__QIV65888.1__Cp1R7AA1_044__00044
Bact-VirMT188704.1__QIV65888.1__Cp1R7AA1_044__00044
Identity
- Accession:
- MT188704 ↗
- Kingdom:
- phage
Quality
76.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-79
Domain cluster:
representative
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4bhqA00 | 3.30.70.2830 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 40.0 | 3.53e-01 | 98.7% | 44.0% |
| 4c8yA01 | 3.30.70.1890 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 51.0 | 4.60e-01 | 100.0% | 65.7% |
| 4at7A02 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.56 | 41.0 | 3.33e-01 | 78.7% | 65.8% |
| 1pu1A00 | 3.30.300.100 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › MTH677-like | 0.55 | 42.0 | 3.99e-01 | 96.0% | 69.2% |
| 2dhaA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.55 | 39.0 | 3.42e-01 | 100.0% | 47.2% |
| 3p3dA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.55 | 38.0 | 3.63e-01 | 100.0% | 62.1% |
| 2o8bB01 | 3.40.1170.10 | Alpha Beta › 3-Layer(aba) Sandwich › MutS, DNA mismatch repair protein, domain I › DNA repair protein MutS, domain I | 0.55 | 43.0 | 3.37e-01 | 88.0% | 67.6% |
| 6lpnA03 | 3.30.70.2190 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 45.0 | 3.92e-01 | 100.0% | 59.6% |
| 3v4mB00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.54 | 43.0 | 3.95e-01 | 100.0% | 64.4% |
| 6fgjA01 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.53 | 45.0 | 3.63e-01 | 97.3% | 54.0% |
| 4qu6A01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.52 | 37.0 | 3.59e-01 | 100.0% | 64.4% |
| 3t4nA01 | 3.30.310.80 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 | 0.52 | 45.0 | 4.25e-01 | 100.0% | 87.5% |
| 2nrqA00 | 3.30.1440.10 | Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 | 0.52 | 38.0 | 3.26e-01 | 100.0% | 45.3% |
| 1e5tA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.51 | 39.0 | 2.60e-01 | 86.7% | 62.7% |
| 7v6bA01 | 3.30.160.380 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Dicer dimerisation domain | 0.51 | 36.0 | 3.24e-01 | 90.7% | 50.9% |
ECOD (21)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3242853 | 5001.1.1.41 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srw | 0.59 | 52.0 | 3.54e-01 | 100.0% | 62.4% |
| 5038130 | 10.12.1.6 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › AIM24 | 0.59 | 38.0 | 2.79e-01 | 90.7% | 23.3% |
| 5046059 | 327.11.2.83 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_DUF2096_C | 0.58 | 35.0 | 3.89e-01 | 100.0% | 80.0% |
| 4959770 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.57 | 36.0 | 2.78e-01 | 98.7% | 26.1% |
| 3653772 | 323.1.1.7 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Transferase | 0.57 | 50.0 | 3.65e-01 | 100.0% | 90.7% |
| 3830890 | 323.1.1.7 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Transferase | 0.57 | 50.0 | 3.53e-01 | 100.0% | 85.0% |
| 4023049 | 323.1.1.14 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AATase | 0.56 | 49.0 | 3.39e-01 | 100.0% | 77.1% |
| 4998300 | 304.6.1.1 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › FAD-oxidase_C | 0.56 | 46.0 | 3.19e-01 | 100.0% | 26.8% |
| 3838458 | 316.1.1.13 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › RelA_SpoT | 0.56 | 47.0 | 3.63e-01 | 96.0% | 41.7% |
| 3797657 | 304.55.2.0 ↗ | a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Transposase IS200-like | 0.55 | 47.0 | 4.23e-01 | 100.0% | 76.4% |
| 137823 | 2003.1.2.19 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Thi4 | 0.54 | 44.0 | 2.93e-01 | 89.3% | 81.7% |
| 4951978 | 324.1.1.1 ↗ | a+b two layers › OsmC-like › OsmC-like › OsmC-like › OsmC | 0.54 | 46.0 | 3.62e-01 | 96.0% | 49.4% |
| 3767943 | 304.6.1.1 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › FAD-oxidase_C | 0.54 | 41.0 | 3.08e-01 | 100.0% | 32.3% |
| 3301261 | 2004.1.1.73 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 | 0.53 | 40.0 | 2.74e-01 | 82.7% | 90.8% |
| 5011941 | 304.6.1.1 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › FAD-oxidase_C | 0.53 | 43.0 | 3.00e-01 | 100.0% | 27.2% |
| None | — | 0.53 | 38.0 | 2.63e-01 | 78.7% | 77.3% | |
| 3885646 | 310.1.1.5 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain › Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain › PF26758 | 0.52 | 40.0 | 3.56e-01 | 96.0% | 55.7% |
| 3234513 | 1169.1.1.3 ↗ | a+b complex topology › Procyclic specific surface antigen-2 › Procyclic specific surface antigen-2 › Procyclic specific surface antigen-2 › CX | 0.52 | 36.0 | 3.76e-01 | 90.7% | 84.6% |
| 3408870 | 330.1.1.3 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › Dicer_dimer | 0.52 | 37.0 | 3.34e-01 | 90.7% | 52.7% |
| 3231197 | 384.1.1.4 ↗ | few secondary structure elements › BPTI-like › BPTI-like › BPTI-like › CX | 0.52 | 36.0 | 3.67e-01 | 93.3% | 78.6% |
| 3995051 | 389.2.1.3 ↗ | few secondary structure elements › EGF-like › Serine protease inhibitors › Serine protease inhibitors › TIL_2 | 0.51 | 38.0 | 4.00e-01 | 93.3% | 95.4% |