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MT188704.1__QIV65917.1__Cp1R7AA1_032__00032
Bact-VirMT188704.1__QIV65917.1__Cp1R7AA1_032__00032
Identity
- Accession:
- MT188704 ↗
- Kingdom:
- phage
Quality
67.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 11-66
Domain cluster:
representative
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3c3dA02 | 1.10.8.240 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › CofD-like domain | 0.75 | 64.0 | 5.52e-01 | 94.6% | 100.0% |
| 2ekfA01 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.74 | 48.0 | 5.24e-01 | 91.1% | 82.6% |
| 1ybzA00 | 1.20.59.10 | Mainly Alpha › Up-down Bundle › Chorismate Mutase Domain, subunit A › Chorismate mutase | 0.72 | 47.0 | 4.27e-01 | 75.0% | 50.0% |
| 2aplA01 | 1.10.8.330 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › PG0816-like | 0.70 | 57.0 | 5.47e-01 | 94.6% | 97.1% |
| 3jr7A01 | 3.40.50.10440 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Dihydroxyacetone kinase; domain 1 | 0.68 | 60.0 | 4.69e-01 | 100.0% | 66.1% |
| 1rp3A01 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.67 | 58.0 | 5.08e-01 | 98.2% | 77.6% |
| 2ahoB02 | 1.10.150.190 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Translation initiation factor 2; subunit 1; domain 2 | 0.67 | 56.0 | 4.90e-01 | 100.0% | 78.0% |
| 3fdjA01 | 3.40.50.10440 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Dihydroxyacetone kinase; domain 1 | 0.67 | 57.0 | 4.61e-01 | 96.4% | 70.6% |
| 2qgaB01 | 1.10.275.10 | Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) | 0.67 | 56.0 | 4.47e-01 | 94.6% | 66.7% |
| 4jndA01 | 1.10.1740.220 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › | 0.66 | 53.0 | 4.24e-01 | 96.4% | 59.2% |
| 4fzlA01 | 1.10.150.790 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.66 | 52.0 | 4.53e-01 | 87.5% | 59.8% |
| 1nxhA00 | 1.10.3070.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein MTH393 › EhaM-like | 0.66 | 56.0 | 4.43e-01 | 100.0% | 50.8% |
| 3l6gA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.65 | 58.0 | 4.21e-01 | 98.2% | 88.0% |
| 2xvtC00 | 1.10.150.510 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Receptor activity modifying family | 0.65 | 44.0 | 4.06e-01 | 75.0% | 51.9% |
| 7oocC01 | 1.10.1050.10 | Mainly Alpha › Orthogonal Bundle › Ribosomal Protein S4 Delta 41; Chain A, domain 1 › Ribosomal protein S4/S9, N-terminal domain | 0.65 | 44.0 | 3.76e-01 | 76.8% | 41.2% |
| 1s8nA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 53.0 | 5.27e-01 | 100.0% | 94.8% |
| 4eeiA01 | 1.10.275.10 | Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) | 0.62 | 53.0 | 4.58e-01 | 100.0% | 82.6% |
| 3ilkA02 | 1.10.8.590 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.61 | 49.0 | 4.67e-01 | 91.1% | 77.9% |
| 2el7A02 | 1.10.240.10 | Mainly Alpha › Orthogonal Bundle › Tyrosyl-Transfer RNA Synthetase › Tyrosyl-Transfer RNA Synthetase | 0.60 | 41.0 | 3.53e-01 | 91.1% | 43.6% |
| 4g6dB02 | 6.10.140.1800 | Special › Helix non-globular › Helix Hairpins › | 0.57 | 43.0 | 3.89e-01 | 94.6% | 58.0% |
| 2h09A02 | 1.10.60.10 | Mainly Alpha › Orthogonal Bundle › Diphtheria Toxin Repressor; domain 2 › Iron dependent repressor, metal binding and dimerisation domain | 0.55 | 44.0 | 4.44e-01 | 100.0% | 91.1% |
| 1wh5A00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.54 | 37.0 | 3.38e-01 | 73.2% | 51.2% |
ECOD (32)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5040543 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.88 | 75.0 | 7.57e-01 | 98.2% | 92.7% |
| 5019815 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.86 | 66.0 | 7.24e-01 | 87.5% | 100.0% |
| 5033498 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.84 | 68.0 | 7.20e-01 | 87.5% | 100.0% |
| 5004958 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.84 | 70.0 | 7.14e-01 | 94.6% | 92.7% |
| 4957947 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.81 | 66.0 | 6.73e-01 | 94.6% | 92.7% |
| 3184842 | 103.1.1.94 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › PF26112 | 0.79 | 56.0 | 5.25e-01 | 96.4% | 61.4% |
| 4992168 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.77 | 67.0 | 5.69e-01 | 100.0% | 60.0% |
| 3586853 | 604.12.1.63 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › ECF_trnsprt | 0.76 | 50.0 | 3.44e-01 | 91.1% | 21.1% |
| 3594325 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.73 | 54.0 | 5.63e-01 | 94.6% | 94.0% |
| 4961802 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.72 | 62.0 | 5.90e-01 | 96.4% | 83.1% |
| 3706045 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.70 | 56.0 | 5.83e-01 | 100.0% | 98.0% |
| 4253460 | 321.1.1.7 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase › GCS2 | 0.70 | 59.0 | 3.51e-01 | 91.1% | 52.8% |
| 4946942 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.68 | 60.0 | 4.84e-01 | 96.4% | 68.3% |
| 3603861 | 102.1.1.11 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › RNA_pol_Rpb4 | 0.68 | 61.0 | 4.81e-01 | 98.2% | 64.5% |
| 3265661 | 3721.1.1.1 ↗ | alpha bundles › Protein regulator of cytokinesis 1 (PRC1) dimerization domain › Protein regulator of cytokinesis 1 (PRC1) dimerization domain › Protein regulator of cytokinesis 1 (PRC1) dimerization domain › VIT1 | 0.68 | 50.0 | 4.74e-01 | 91.1% | 65.7% |
| 4146096 | 181.1.1.0 ↗ | alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins | 0.67 | 53.0 | 4.82e-01 | 91.1% | 71.2% |
| 3279199 | 3721.1.1.1 ↗ | alpha bundles › Protein regulator of cytokinesis 1 (PRC1) dimerization domain › Protein regulator of cytokinesis 1 (PRC1) dimerization domain › Protein regulator of cytokinesis 1 (PRC1) dimerization domain › VIT1 | 0.67 | 51.0 | 4.75e-01 | 91.1% | 67.1% |
| 3608559 | 3721.1.1.1 ↗ | alpha bundles › Protein regulator of cytokinesis 1 (PRC1) dimerization domain › Protein regulator of cytokinesis 1 (PRC1) dimerization domain › Protein regulator of cytokinesis 1 (PRC1) dimerization domain › VIT1 | 0.66 | 50.0 | 4.70e-01 | 92.9% | 67.1% |
| 3951854 | 103.12.1.1 ↗ | alpha arrays › RuvA-C › ANTAR domain › ANTAR domain › ANTAR | 0.65 | 54.0 | 5.34e-01 | 100.0% | 91.7% |
| 4194780 | 321.1.1.7 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase › GCS2 | 0.65 | 54.0 | 3.25e-01 | 91.1% | 52.7% |
| 4126690 | 101.35.1.4 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH3 | 0.65 | 43.0 | 4.34e-01 | 78.6% | 69.1% |
| 3960463 | 103.12.1.0 ↗ | alpha arrays › RuvA-C › ANTAR domain › ANTAR domain | 0.64 | 53.0 | 5.24e-01 | 100.0% | 91.7% |
| 3928496 | 143.1.1.0 ↗ | alpha arrays › PABP domain-like › PABC(PABP) domain › PABC(PABP) domain | 0.63 | 56.0 | 5.48e-01 | 98.2% | 91.7% |
| 3966878 | 3721.1.1.1 ↗ | alpha bundles › Protein regulator of cytokinesis 1 (PRC1) dimerization domain › Protein regulator of cytokinesis 1 (PRC1) dimerization domain › Protein regulator of cytokinesis 1 (PRC1) dimerization domain › VIT1 | 0.63 | 47.0 | 4.42e-01 | 91.1% | 65.7% |
| 3287744 | 103.12.1.1 ↗ | alpha arrays › RuvA-C › ANTAR domain › ANTAR domain › ANTAR | 0.63 | 52.0 | 5.08e-01 | 92.9% | 85.0% |
| 3652788 | 101.1.17.0 ↗ | alpha arrays › HTH › HTH › FF domain | 0.63 | 43.0 | 4.28e-01 | 73.2% | 68.3% |
| 3960202 | 3721.1.1.1 ↗ | alpha bundles › Protein regulator of cytokinesis 1 (PRC1) dimerization domain › Protein regulator of cytokinesis 1 (PRC1) dimerization domain › Protein regulator of cytokinesis 1 (PRC1) dimerization domain › VIT1 | 0.62 | 48.0 | 4.53e-01 | 92.9% | 70.0% |
| 4028974 | 5042.1.1.1 ↗ | extended segments › Magnesium transport protein CorA, transmembrane region › Magnesium transport protein CorA, transmembrane region › Magnesium transport protein CorA, transmembrane region › CorA | 0.62 | 41.0 | 4.03e-01 | 71.4% | 100.0% |
| 4145773 | 101.35.1.4 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH3 | 0.62 | 43.0 | 4.35e-01 | 83.9% | 74.5% |
| 3379162 | 148.1.3.227 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › DUF7750 | 0.58 | 47.0 | 4.45e-01 | 96.4% | 81.4% |
| 3686464 | 3721.1.1.0 ↗ | alpha bundles › Protein regulator of cytokinesis 1 (PRC1) dimerization domain › Protein regulator of cytokinesis 1 (PRC1) dimerization domain › Protein regulator of cytokinesis 1 (PRC1) dimerization domain | 0.57 | 42.0 | 3.98e-01 | 91.1% | 64.0% |
| 3797399 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.57 | 47.0 | 3.50e-01 | 94.6% | 34.7% |