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MT192033.1__QOE32018.1__CV133_gene11__00007

Bact-Vir

MT192033.1__QOE32018.1__CV133_gene11__00007

Identity

Accession:
MT192033 ↗
Kingdom:
phage

Quality

69.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Chlorobiaceae_phage_CV-1-33

TaxID: 2716170

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 19-83
PDB
Domain cluster: representative
CATH (17)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3ilkA02 1.10.8.590 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.71 51.0 5.05e-01 76.9% 79.4%
3rv0C02 1.10.1520.10 Mainly Alpha › Orthogonal Bundle › Ribonuclease iii, N-terminal Endonuclease Domain; Chain A › Ribonuclease III domain 0.64 44.0 3.46e-01 72.3% 65.3%
1s8nA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 45.0 4.68e-01 73.8% 82.8%
1q9cA01 1.10.20.10 Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A 0.63 53.0 4.22e-01 100.0% 92.5%
1wj7A01 1.10.8.10 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain 0.62 40.0 4.17e-01 92.3% 71.7%
4bemJ00 1.20.120.610 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › lithium bound rotor ring of v- atpase 0.60 52.0 3.86e-01 100.0% 82.9%
2gbbB00 1.20.59.10 Mainly Alpha › Up-down Bundle › Chorismate Mutase Domain, subunit A › Chorismate mutase 0.60 49.0 3.82e-01 93.8% 76.1%
3deeA01 1.10.150.690 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › DUF2063 0.60 47.0 4.39e-01 89.2% 72.1%
4dbgB02 1.10.8.10 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain 0.60 44.0 4.50e-01 92.3% 83.6%
1lp1A00 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.60 44.0 4.65e-01 84.6% 94.5%
1qrvA00 1.10.30.10 Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain 0.57 38.0 3.68e-01 70.8% 60.3%
7r97A01 1.10.1520.10 Mainly Alpha › Orthogonal Bundle › Ribonuclease iii, N-terminal Endonuclease Domain; Chain A › Ribonuclease III domain 0.57 49.0 3.82e-01 98.5% 73.0%
3n00A00 1.10.565.10 Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor 0.55 46.0 3.36e-01 95.4% 83.2%
3p0uA00 1.10.565.10 Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor 0.54 45.0 3.18e-01 96.9% 74.3%
1xl7A01 1.10.275.20 Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Choline/Carnitine o-acyltransferase 0.53 38.0 3.33e-01 78.5% 67.0%
1a59A02 1.10.230.10 Mainly Alpha › Orthogonal Bundle › Cytochrome p450-Terp; domain 2 › Cytochrome P450-Terp, domain 2 0.52 37.0 3.27e-01 86.2% 48.1%
4uobA02 1.10.340.30 Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Hypothetical protein; domain 2 0.50 41.0 3.43e-01 95.4% 85.7%
ECOD (16)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4022288 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.70 60.0 5.57e-01 100.0% 75.3%
3628610 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.70 60.0 5.49e-01 100.0% 85.6%
3254417 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.70 56.0 5.39e-01 100.0% 78.7%
5049780 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.67 58.0 4.75e-01 100.0% 71.1%
3928496 143.1.1.0 ↗ alpha arrays › PABP domain-like › PABC(PABP) domain › PABC(PABP) domain 0.66 50.0 5.21e-01 95.4% 90.0%
3936880 103.1.1.0 ↗ alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain 0.64 48.0 4.98e-01 98.5% 88.3%
3736610 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.63 53.0 4.73e-01 100.0% 89.0%
3722053 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.61 53.0 4.92e-01 100.0% 83.5%
3213401 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.60 51.0 4.68e-01 100.0% 78.9%
4025457 103.1.1.0 ↗ alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain 0.59 45.0 4.23e-01 89.2% 67.1%
3878144 601.1.2.2 ↗ alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) › I_LWEQ 0.56 40.0 3.19e-01 75.4% 58.5%
3517687 601.1.2.4 ↗ alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) › Talin_R4 0.55 40.0 3.23e-01 80.0% 62.9%
3619802 601.1.1.110 ↗ alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin › Transmemb_17 0.55 40.0 3.57e-01 80.0% 82.0%
3952601 103.12.1.1 ↗ alpha arrays › RuvA-C › ANTAR domain › ANTAR domain › ANTAR 0.55 44.0 4.37e-01 93.8% 100.0%
4979179 103.7.1.1 ↗ alpha arrays › RuvA-C › Hypothetical protein MTH1615 › Hypothetical protein MTH1615 › dsDNA_bind 0.54 44.0 3.77e-01 98.5% 55.5%
5029782 601.7.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain 0.51 38.0 3.47e-01 83.1% 96.7%
D2 high residues 91-129
PDB
Domain cluster: representative
CATH (20)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4tzmB00 3.30.900.10 Alpha Beta › 2-Layer Sandwich › Cell Cycle, Spindle Assembly Checkpoint Protein; Chain A › HORMA domain 0.63 47.0 2.94e-01 84.6% 15.4%
1zbdB00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.62 45.0 3.27e-01 82.1% 41.5%
2uv8A06 3.30.70.2490 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.60 41.0 3.50e-01 82.1% 41.8%
4ijaA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 38.0 3.25e-01 84.6% 41.3%
2ab5A02 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.58 40.0 2.93e-01 89.7% 23.1%
2lsoA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 37.0 2.85e-01 82.1% 31.3%
4rayA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 43.0 3.42e-01 87.2% 57.6%
2felA00 1.20.200.10 Mainly Alpha › Up-down Bundle › Fumarase C; Chain A, domain 2 › Fumarase/aspartase (Central domain) 0.56 45.0 2.69e-01 92.3% 18.4%
4fhdA02 3.80.30.30 Alpha Beta › Alpha-Beta Horseshoe › pyruvate-formate lyase- activating enzyme › 0.56 43.0 2.81e-01 100.0% 29.1%
1h2iA01 3.30.390.80 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › DNA repair protein Rad52/59/22 0.55 37.0 2.64e-01 74.4% 68.2%
1vw4700 3.30.780.10 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › SUI1-like domain 0.54 38.0 2.99e-01 87.2% 30.2%
2fbhA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 39.0 2.91e-01 89.7% 34.3%
4gyiA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 39.0 3.18e-01 87.2% 48.4%
2af6A01 3.30.70.3180 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.53 38.0 2.88e-01 89.7% 26.7%
1e6vB02 1.20.840.10 Mainly Alpha › Up-down Bundle › Methyl-coenzyme M Reductase; Chain B, domain 2 › Methyl-coenzyme M reductase, alpha/beta subunit, C-terminal 0.52 43.0 2.64e-01 100.0% 31.1%
7r9xA01 3.30.559.10 Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain 0.52 38.0 2.65e-01 87.2% 58.9%
4hqeA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 38.0 2.98e-01 87.2% 44.8%
3uk7A01 3.40.50.880 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain 0.51 43.0 2.84e-01 100.0% 42.6%
4e70A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 34.0 2.70e-01 71.8% 65.3%
7kfuC02 1.20.120.920 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CRISPR-associated endonuclease Cas1, C-terminal domain 0.50 38.0 2.45e-01 89.7% 39.9%
ECOD (21)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5031727 101.1.2.150 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_45 0.61 46.0 3.61e-01 87.2% 46.3%
3491348 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.61 45.0 3.71e-01 89.7% 61.2%
5071949 101.1.2.78 ↗ alpha arrays › HTH › HTH › winged helix domain › AlkZ-like 0.57 46.0 3.13e-01 100.0% 31.8%
4996634 3239.1.1.0 ↗ alpha complex topology › Cas1 › Cas1 › Cas1 0.55 41.0 2.45e-01 84.6% 33.2%
4948478 327.11.2.0 ↗ a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.55 39.0 3.57e-01 89.7% 53.1%
3434870 101.1.2.386 ↗ alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.55 40.0 3.41e-01 89.7% 70.0%
3502564 312.1.1.6 ↗ a+b three layers › HIT-like › HIT-related › HIT-related › CwfJ_C_2,CwfJ_C_1 0.54 35.0 2.49e-01 97.4% 18.0%
3329453 192.2.1.2 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.53 36.0 2.47e-01 71.8% 85.5%
4992965 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.53 39.0 2.87e-01 87.2% 32.0%
4971669 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.53 37.0 2.79e-01 89.7% 35.9%
4941357 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.53 38.0 3.25e-01 87.2% 55.0%
5031317 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.53 40.0 2.95e-01 89.7% 37.5%
3574593 109.4.1.5 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_1 0.52 36.0 2.36e-01 76.9% 16.0%
3709669 601.23.1.4 ↗ alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III 0.52 39.0 2.48e-01 100.0% 18.4%
5025922 101.1.2.150 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_45 0.52 37.0 3.18e-01 87.2% 55.0%
4430800 304.11.1.2 ↗ a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase › SAT 0.52 43.0 3.66e-01 100.0% 82.9%
4532543 192.2.1.2 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.51 35.0 2.44e-01 71.8% 83.6%
5073620 101.1.9.0 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain 0.51 37.0 3.24e-01 84.6% 50.8%
4996551 192.2.1.2 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.50 35.0 2.41e-01 71.8% 64.3%
2816212 3239.1.1.1 ↗ alpha complex topology › Cas1 › Cas1 › Cas1 › Cas_Cas1 0.50 38.0 2.29e-01 89.7% 27.3%
5012277 101.1.2.904 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_38 0.50 36.0 3.13e-01 87.2% 58.7%