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MT210152.1__QIW89359.1__Gp_85__00085
Bact-VirMT210152.1__QIW89359.1__Gp_85__00085
Identity
- Accession:
- MT210152 ↗
- Kingdom:
- phage
Quality
91.9
mean pLDDT
Taxonomy
TaxID: 2723960
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 72-113
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3t7lA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.76 | 61.0 | 5.07e-01 | 90.5% | 56.8% |
| 4e1pA00 | 3.30.60.230 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › Lsr2, dimerisation domain | 0.73 | 60.0 | 5.62e-01 | 100.0% | 80.0% |
| 3mekA02 | 6.10.140.2220 | Special › Helix non-globular › Helix Hairpins › | 0.69 | 47.0 | 4.49e-01 | 78.6% | 61.2% |
| 1m1jB03 | 1.20.5.50 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.68 | 40.0 | 2.71e-01 | 100.0% | 16.7% |
| 2z1cB00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.67 | 47.0 | 3.90e-01 | 73.8% | 41.9% |
| 1x4iA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.62 | 53.0 | 4.53e-01 | 97.6% | 64.3% |
| 1jy2O00 | 1.20.5.50 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.61 | 37.0 | 3.49e-01 | 100.0% | 43.1% |
| 1vx7000 | 2.30.170.20 | Mainly Beta › Roll › Ribosomal Protein L24e; Chain: T; › Ribosomal protein L24 | 0.61 | 46.0 | 4.21e-01 | 90.5% | 64.5% |
| 3kenA00 | 3.40.850.10 | Alpha Beta › 3-Layer(aba) Sandwich › Kinesin › Kinesin motor domain | 0.56 | 41.0 | 2.45e-01 | 76.2% | 23.1% |
| 5undA01 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.55 | 36.0 | 3.40e-01 | 92.9% | 51.9% |
| 1rmdA02 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.50 | 33.0 | 3.44e-01 | 71.4% | 93.3% |
ECOD (50)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3611997 | 376.1.2.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain | 0.81 | 69.0 | 6.85e-01 | 92.9% | 88.6% |
| 3549240 | 5.1.4.253 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, WD40_Gbeta | 0.80 | 63.0 | 3.62e-01 | 95.2% | 9.6% |
| 3594477 | 377.1.3.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › Zinc-binding subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0.79 | 63.0 | 6.45e-01 | 90.5% | 92.5% |
| 5015313 | 375.1.1.351 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › PF26602 | 0.78 | 58.0 | 6.26e-01 | 90.5% | 97.1% |
| 4937956 | 375.1.1.351 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › PF26602 | 0.78 | 58.0 | 6.24e-01 | 90.5% | 97.1% |
| 3394910 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.77 | 56.0 | 6.00e-01 | 78.6% | 97.1% |
| 4941387 | 375.1.1.35 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › HVO_2753_ZBP | 0.76 | 56.0 | 5.48e-01 | 78.6% | 77.8% |
| 3230559 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.76 | 61.0 | 6.28e-01 | 90.5% | 95.0% |
| 4927397 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.76 | 66.0 | 4.40e-01 | 100.0% | 38.2% |
| 3208684 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.75 | 59.0 | 5.30e-01 | 88.1% | 61.7% |
| 3926338 | 376.1.1.94 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_IRF-2BP1_2 | 0.75 | 65.0 | 4.96e-01 | 100.0% | 43.2% |
| 5081423 | 378.1.1.3 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › Endonuclease_7 | 0.74 | 64.0 | 5.28e-01 | 97.6% | 55.4% |
| 3928741 | 376.1.1.27 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_5 | 0.73 | 61.0 | 4.96e-01 | 100.0% | 49.4% |
| 3219097 | 377.1.1.4 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › GATA | 0.72 | 57.0 | 5.66e-01 | 90.5% | 88.9% |
| 5041606 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.71 | 63.0 | 5.46e-01 | 100.0% | 72.3% |
| 3197591 | 376.1.1.3 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › ZZ | 0.71 | 53.0 | 5.24e-01 | 81.0% | 77.8% |
| 3607251 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.71 | 53.0 | 5.64e-01 | 85.7% | 100.0% |
| 4015975 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.71 | 54.0 | 5.54e-01 | 83.3% | 90.0% |
| 3471550 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.70 | 52.0 | 5.50e-01 | 83.3% | 100.0% |
| 3425436 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.69 | 57.0 | 5.89e-01 | 88.1% | 95.0% |
| 3181845 | 376.1.1.3 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › ZZ | 0.69 | 57.0 | 5.37e-01 | 90.5% | 80.0% |
| 3520235 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.69 | 53.0 | 5.21e-01 | 85.7% | 82.2% |
| 3785730 | 375.1.1.25 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Tfb4 | 0.69 | 46.0 | 4.33e-01 | 92.9% | 54.5% |
| 3714085 | 377.9.1.1 ↗ | few secondary structure elements › Glucocorticoid receptor-like › HIT/MYND zinc finger-like › HIT/MYND zinc finger-like › zf-MYND | 0.67 | 45.0 | 4.65e-01 | 81.0% | 75.0% |
| 3918443 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.63 | 47.0 | 4.66e-01 | 90.5% | 80.0% |
| 4976002 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.63 | 45.0 | 4.63e-01 | 78.6% | 87.5% |
| 3697056 | 376.1.3.25 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › PHD-1st_NSD | 0.63 | 55.0 | 4.91e-01 | 100.0% | 78.3% |
| 3182821 | 109.4.1.1164 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › zf-MYND | 0.62 | 43.0 | 2.50e-01 | 83.3% | 7.4% |
| 3409760 | 376.1.1.19 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › RINGv | 0.62 | 51.0 | 4.62e-01 | 97.6% | 71.7% |
| 3426696 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.61 | 47.0 | 4.77e-01 | 97.6% | 95.3% |
| 3233807 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.60 | 47.0 | 4.22e-01 | 100.0% | 58.6% |
| 4926891 | 377.1.1.126 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › Arc_trans_TRASH | 0.60 | 45.0 | 4.50e-01 | 90.5% | 82.2% |
| 3919489 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.60 | 45.0 | 4.65e-01 | 90.5% | 92.5% |
| 4635530 | 4028.1.1.1 ↗ | beta barrels › Barrel domain in heme-dependent catalases › Barrel domain in heme-dependent catalases › Barrel domain in heme-dependent catalases › Catalase | 0.60 | 42.0 | 2.42e-01 | 76.2% | 14.4% |
| 3908093 | 377.9.1.8 ↗ | few secondary structure elements › Glucocorticoid receptor-like › HIT/MYND zinc finger-like › HIT/MYND zinc finger-like › zf-FCS | 0.59 | 48.0 | 4.79e-01 | 100.0% | 91.1% |
| 3818617 | 376.1.1.103 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_Vps41 | 0.59 | 46.0 | 4.34e-01 | 95.2% | 72.7% |
| 5071881 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.59 | 45.0 | 4.17e-01 | 92.9% | 68.3% |
| 3332901 | 376.1.1.12 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING-like | 0.58 | 46.0 | 4.37e-01 | 100.0% | 72.7% |
| 3528204 | 377.1.1.16 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › zf-FCS | 0.58 | 45.0 | 4.64e-01 | 100.0% | 100.0% |
| 2875038 | 3993.1.1.1 ↗ | few secondary structure elements › C-P lyase subunit PhnJ C-terminal Zn-binding domain › C-P lyase subunit PhnJ C-terminal Zn-binding domain › C-P lyase subunit PhnJ C-terminal Zn-binding domain › PhnJ | 0.57 | 40.0 | 4.00e-01 | 78.6% | 80.4% |
| 3269829 | 377.9.1.1 ↗ | few secondary structure elements › Glucocorticoid receptor-like › HIT/MYND zinc finger-like › HIT/MYND zinc finger-like › zf-MYND | 0.57 | 41.0 | 4.09e-01 | 88.1% | 75.6% |
| 3541609 | 377.1.1.16 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › zf-FCS | 0.57 | 44.0 | 4.48e-01 | 90.5% | 95.0% |
| 3878133 | 375.1.1.265 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-FCS | 0.56 | 43.0 | 4.41e-01 | 100.0% | 100.0% |
| 3919938 | 2007.2.5.3 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Rhodanese/Cell cycle control phosphatase › Rhodanese, Rhodanese_C | 0.56 | 38.0 | 2.59e-01 | 73.8% | 17.3% |
| 2721320 | 386.1.1.7 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-U11-48K | 0.55 | 38.0 | 3.80e-01 | 95.2% | 71.1% |
| 3413858 | 70.3.1.0 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like | 0.55 | 40.0 | 2.44e-01 | 88.1% | 10.7% |
| 4125700 | 386.1.1.59 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › Zap1_zf1 | 0.53 | 39.0 | 4.15e-01 | 100.0% | 97.1% |
| 4134779 | 2007.2.5.3 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Rhodanese/Cell cycle control phosphatase › Rhodanese, Rhodanese_C | 0.52 | 42.0 | 2.69e-01 | 90.5% | 20.5% |
| 3513922 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.50 | 39.0 | 3.84e-01 | 97.6% | 98.0% |
| 4942573 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.50 | 41.0 | 3.65e-01 | 90.5% | 78.3% |
D2
medium
residues 7-71
Domain cluster:
rep: MN695334.1__QGT54432.1__b3_0188__00174__D59-120
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1cnzA00 | 3.40.718.10 | Alpha Beta › 3-Layer(aba) Sandwich › Isopropylmalate Dehydrogenase › Isopropylmalate Dehydrogenase | 0.72 | 49.0 | 3.00e-01 | 70.8% | 86.5% |
| 2x6hA01 | 1.25.40.70 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Phosphatidylinositol 3-kinase, accessory domain (PIK) | 0.64 | 54.0 | 3.91e-01 | 93.8% | 60.8% |
| 1u89A00 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.64 | 50.0 | 3.89e-01 | 84.6% | 64.0% |
| 4qmhA00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.63 | 54.0 | 3.69e-01 | 96.9% | 49.2% |
| 2y8nA00 | 3.20.70.20 | Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › | 0.62 | 49.0 | 2.73e-01 | 86.2% | 32.0% |
| 4bojA00 | 1.50.10.20 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.62 | 54.0 | 3.46e-01 | 100.0% | 60.7% |
| 4fd4A00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.62 | 52.0 | 3.69e-01 | 95.4% | 51.4% |
| 3flkA00 | 3.40.718.10 | Alpha Beta › 3-Layer(aba) Sandwich › Isopropylmalate Dehydrogenase › Isopropylmalate Dehydrogenase | 0.61 | 49.0 | 3.03e-01 | 86.2% | 86.6% |
| 2oh3A01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.59 | 49.0 | 3.84e-01 | 93.8% | 85.4% |
| 1go3F02 | 6.10.140.10 | Special › Helix non-globular › Helix Hairpins › | 0.57 | 39.0 | 4.30e-01 | 89.2% | 100.0% |
| 4r42A01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.56 | 48.0 | 3.46e-01 | 95.4% | 75.4% |
| 3m1cB01 | 3.30.390.170 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › | 0.55 | 44.0 | 3.85e-01 | 92.3% | 94.5% |
| 4xchA00 | 3.30.1360.80 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › S-ribosylhomocysteinase (LuxS) | 0.55 | 47.0 | 3.64e-01 | 96.9% | 59.1% |
| 2mpkA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.54 | 45.0 | 4.40e-01 | 93.8% | 89.2% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3272659 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.69 | 52.0 | 3.29e-01 | 83.1% | 39.7% |
| 3608259 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.64 | 54.0 | 3.64e-01 | 95.4% | 53.1% |
| 5048121 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.64 | 46.0 | 3.31e-01 | 76.9% | 63.4% |
| 3187164 | 109.4.1.954 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT_EF3_N | 0.64 | 55.0 | 3.68e-01 | 96.9% | 54.1% |
| 4015019 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.63 | 53.0 | 3.60e-01 | 95.4% | 54.4% |
| 3723226 | 226.1.1.0 ↗ | a+b two layers › POZ domain › POZ domain › POZ domain | 0.62 | 52.0 | 4.02e-01 | 89.2% | 85.2% |
| 3837329 | 109.4.1.1273 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_3 | 0.60 | 45.0 | 3.39e-01 | 86.2% | 65.9% |
| 3640926 | 109.4.1.1274 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_3, PPR_long | 0.59 | 50.0 | 3.19e-01 | 100.0% | 29.2% |
| 3516871 | 4320.1.1.1 ↗ | alpha superhelices › Taf5 N-terminal domain-like › Taf5 N-terminal domain-like › Taf5 N-terminal domain-like › TFIID_NTD2 | 0.58 | 41.0 | 3.03e-01 | 75.4% | 81.6% |
| 3502309 | 109.4.1.163 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SYMPK_PTA1_N | 0.56 | 47.0 | 3.08e-01 | 100.0% | 48.8% |
| 3195693 | 109.4.1.2823 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, HAT_Syf1_CNRKL1_N | 0.54 | 47.0 | 3.08e-01 | 100.0% | 34.6% |
| 4992205 | 129.1.1.16 ↗ | alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › NAD_binding_11 | 0.53 | 39.0 | 3.41e-01 | 84.6% | 58.3% |
| 3605785 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.53 | 45.0 | 3.12e-01 | 100.0% | 60.0% |
| 3222099 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.52 | 40.0 | 3.18e-01 | 89.2% | 47.7% |
| 3384110 | 109.4.1.189 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_2 | 0.52 | 45.0 | 3.39e-01 | 100.0% | 45.9% |
| 2142296 | 150.1.1.3 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › Rubrerythrin | 0.51 | 45.0 | 3.92e-01 | 96.9% | 69.4% |