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MT227924.1__QIW88976.1__phiV208_43__00043
Bact-VirMT227924.1__QIW88976.1__phiV208_43__00043
Identity
- Accession:
- MT227924 ↗
- Kingdom:
- phage
Quality
80.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-91
Domain cluster:
rep: MT119766.1__QIN95315.1__PBR31_00004__00004__D2-87
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1c20A00 | 1.10.150.60 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › ARID DNA-binding domain | 0.60 | 44.0 | 4.00e-01 | 78.7% | 79.7% |
| 4l00A02 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.60 | 44.0 | 3.53e-01 | 77.5% | 87.3% |
| 1aisB02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.58 | 43.0 | 4.30e-01 | 82.0% | 84.0% |
| 6n10A01 | 3.30.230.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › | 0.56 | 45.0 | 3.50e-01 | 88.8% | 93.2% |
| 1t3qA02 | 1.10.150.120 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › [2Fe-2S]-binding domain | 0.56 | 39.0 | 4.10e-01 | 73.0% | 86.4% |
| 1w98B02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.53 | 39.0 | 3.72e-01 | 80.9% | 69.3% |
| 4usaA02 | 1.10.150.120 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › [2Fe-2S]-binding domain | 0.53 | 45.0 | 4.15e-01 | 97.8% | 89.9% |
| 6nmnA02 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.52 | 38.0 | 3.37e-01 | 77.5% | 67.2% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4237129 | 101.1.2.238 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF1376 | 0.76 | 54.0 | 4.99e-01 | 75.3% | 59.1% |
| 3979451 | 101.1.2.241 ↗ | alpha arrays › HTH › HTH › winged helix domain › Phage_rep_O | 0.74 | 56.0 | 5.27e-01 | 79.8% | 70.5% |
| 5041057 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.70 | 49.0 | 4.81e-01 | 71.9% | 74.7% |
| 3930245 | 101.1.2.407 ↗ | alpha arrays › HTH › HTH › winged helix domain › WHD_ORC2 | 0.66 | 52.0 | 4.86e-01 | 95.5% | 68.2% |
| 3901205 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.63 | 48.0 | 4.42e-01 | 82.0% | 71.3% |
| 3767388 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.62 | 47.0 | 4.28e-01 | 82.0% | 64.0% |
| 4485423 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.62 | 47.0 | 4.32e-01 | 82.0% | 66.7% |
| 3574560 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.62 | 46.0 | 4.63e-01 | 92.1% | 78.9% |
| 3222426 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.61 | 47.0 | 4.07e-01 | 84.3% | 95.2% |
| 5000679 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.57 | 42.0 | 4.02e-01 | 79.8% | 67.3% |
| 5053357 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.57 | 42.0 | 3.63e-01 | 79.8% | 50.7% |
| 3714124 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.57 | 43.0 | 3.71e-01 | 80.9% | 62.1% |
| 3788090 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.54 | 41.0 | 3.28e-01 | 82.0% | 77.2% |
| 5039569 | 2485.1.1.10 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › DSBA | 0.54 | 44.0 | 3.44e-01 | 93.3% | 76.2% |
| 3330762 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.53 | 40.0 | 3.69e-01 | 80.9% | 62.6% |
D2
high
residues 140-220
Domain cluster:
rep: MN689509.1__QGT52595.1__CHPC1175_000249__00031__D298-376
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF09524.16 best | Phg_2220_C | 92.8 | 1.50e-26 | 91.4% | 98.6% |