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MT234670.1__QIW88492.1__X__00059
Bact-VirMT234670.1__QIW88492.1__X__00059
Identity
- Accession:
- MT234670 ↗
- Kingdom:
- phage
Quality
66.2
mean pLDDT
Cluster
View cluster (78 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 64-218_358-398
Domain cluster:
rep: KC821618.1__AGO48403.1__Phi10-1_gp062__00062__D33-74_121-234_364-393
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3kdrA02 | 3.40.140.120 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › | 0.74 | 43.0 | 5.25e-01 | 85.2% | 87.4% |
| 3a06B03 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.62 | 27.0 | 3.92e-01 | 88.3% | 88.6% |
| 1jegA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.58 | 20.0 | 3.55e-01 | 70.4% | 100.0% |
| 2ct4A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.58 | 22.0 | 3.66e-01 | 76.0% | 97.1% |
| 1eo0A00 | 1.20.930.10 | Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 | 0.55 | 20.0 | 3.00e-01 | 85.7% | 77.9% |
| 4hsaF02 | 2.60.40.2150 | Mainly Beta › Sandwich › Immunoglobulin-like › Interleukin-17 receptor A/B, fibronectin-III-like domain 2 | 0.54 | 25.0 | 3.16e-01 | 92.9% | 73.3% |
| 7z0kB01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.52 | 19.0 | 3.24e-01 | 78.6% | 100.0% |
| 2gutA00 | 1.10.246.20 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › Coactivator CBP, KIX domain | 0.52 | 22.0 | 3.31e-01 | 91.3% | 96.1% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3942943 | 4056.1.1.1 ↗ | beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Phage_prot_Gp6 | 0.77 | 59.0 | 5.38e-01 | 79.1% | 92.2% |
| 4891117 | 4038.1.1.11 ↗ | alpha bundles › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › SU10_portal | 0.77 | 72.0 | 5.05e-01 | 100.0% | 88.0% |
| 4267142 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.62 | 17.0 | 2.84e-01 | 78.6% | 62.7% |
| 3510263 | 224.1.1.1 ↗ | a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like › Cofilin_ADF | 0.57 | 33.0 | 3.73e-01 | 79.6% | 73.3% |
| 3969324 | 223.1.1.7 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › Autoind_bind | 0.54 | 29.0 | 3.08e-01 | 81.6% | 55.0% |
| 1545880 | 4.1.1.278 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_YKFC_2nd | 0.53 | 22.0 | 3.39e-01 | 87.8% | 93.8% |
| 3925634 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.52 | 20.0 | 3.39e-01 | 83.7% | 100.0% |
| 185824 | 103.4.1.3 ↗ | alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Med15_N | 0.52 | 22.0 | 3.31e-01 | 91.3% | 96.1% |
| 3924816 | 859.1.1.0 ↗ | a+b two layers › The spindle assembly checkpoint protein mad2 › The spindle assembly checkpoint protein mad2 › The spindle assembly checkpoint protein mad2 | 0.51 | 27.0 | 3.08e-01 | 86.2% | 62.7% |
| 4467649 | 223.1.1.5 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › HrcA | 0.50 | 28.0 | 2.96e-01 | 86.7% | 56.7% |
D2
medium
residues 399-469