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MT234670.1__QIW88585.1__X__00152

Bact-Vir

MT234670.1__QIW88585.1__X__00152

Identity

Accession:
MT234670 ↗
Kingdom:
phage

Quality

97.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-51
PDB
Domain cluster: representative
CATH (48)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1fuuB01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.73 60.0 3.94e-01 92.0% 32.7%
6s2wA01 3.30.2260.10 Alpha Beta › 2-Layer Sandwich › ERH-like fold › Enhancer of rudimentary 0.66 56.0 4.86e-01 100.0% 78.0%
4kyzA00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.66 56.0 3.92e-01 98.0% 47.3%
7o4xA01 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.65 54.0 4.49e-01 100.0% 86.9%
3a21A02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.65 44.0 3.67e-01 98.0% 39.6%
3b49A00 3.20.80.10 Alpha Beta › Alpha-Beta Barrel › Multidrug-efflux Transporter 1 Regulator Bmrr; Chain A › Regulatory factor, effector binding domain 0.64 56.0 3.72e-01 100.0% 53.4%
2zt5A02 3.30.40.230 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › 0.64 53.0 4.62e-01 100.0% 97.6%
2pw9C03 3.40.140.10 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 0.62 52.0 3.89e-01 100.0% 48.6%
6kghA02 3.30.450.330 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.62 45.0 3.26e-01 80.0% 76.0%
1ifqB00 3.30.450.50 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Longin domain 0.62 47.0 3.53e-01 84.0% 80.5%
8d8lF01 3.30.70.60 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B 0.62 51.0 3.97e-01 100.0% 87.0%
2yuxA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.61 49.0 3.98e-01 100.0% 44.4%
2oo3A00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.60 48.0 3.15e-01 98.0% 21.0%
3tw8A01 3.30.450.200 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Longin module 0.60 40.0 3.02e-01 76.0% 25.4%
4ftxB01 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.60 44.0 3.35e-01 80.0% 95.3%
1bu6O01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.59 49.0 3.20e-01 100.0% 93.6%
3eqvA02 3.30.450.330 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.59 43.0 3.29e-01 82.0% 75.2%
3eipA00 3.10.50.20 Alpha Beta › Roll › Chitinase A; domain 3 › Cloacin immunity protein 0.59 49.0 4.27e-01 100.0% 98.8%
1ktbA02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.59 41.0 3.48e-01 98.0% 41.8%
1xp4A01 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.59 49.0 3.19e-01 100.0% 72.1%
1es2A00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.59 49.0 3.22e-01 100.0% 72.7%
3ue3A02 3.30.450.330 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.58 41.0 3.13e-01 80.0% 78.2%
4gn2A00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.58 48.0 3.21e-01 100.0% 63.3%
3h7lA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 50.0 4.05e-01 96.0% 58.1%
6lxgA01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.57 45.0 4.09e-01 92.0% 100.0%
3d33A00 2.60.40.3080 Mainly Beta › Sandwich › Immunoglobulin-like › 0.57 44.0 3.77e-01 100.0% 50.0%
3x17A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 48.0 3.81e-01 96.0% 52.0%
2wanA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 45.0 3.78e-01 100.0% 49.0%
3rosA01 3.40.605.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 0.56 48.0 3.06e-01 100.0% 75.4%
1whwA01 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.55 45.0 3.82e-01 100.0% 85.1%
2mzsA00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.54 43.0 3.61e-01 96.0% 77.8%
3fedA02 3.50.30.30 Alpha Beta › 3-Layer(bba) Sandwich › Glucose Oxidase; domain 1 › 0.54 42.0 2.89e-01 94.0% 98.2%
5eo9B01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 46.0 3.67e-01 100.0% 53.6%
3onhA01 3.10.290.20 Alpha Beta › Roll › Structural Genomics Hypothetical 15.5 Kd Protein In mrcA-pckA Intergenic Region; Chain A › Ubiquitin-like 2 activating enzyme e1b. Chain: B, domain 3 0.54 40.0 3.25e-01 100.0% 38.7%
1w5dA01 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.53 43.0 2.80e-01 92.0% 81.1%
5x6vF00 3.30.450.190 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.53 47.0 3.52e-01 98.0% 62.7%
2kr7A01 3.10.50.40 Alpha Beta › Roll › Chitinase A; domain 3 › 0.52 42.0 3.60e-01 98.0% 75.5%
1z3aA00 3.40.140.10 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 0.52 42.0 3.15e-01 100.0% 71.8%
5amhA00 2.170.150.20 Mainly Beta › Beta Complex › Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A › Peptide methionine sulfoxide reductase. 0.52 44.0 3.43e-01 94.0% 100.0%
1z85B02 3.40.1280.10 Alpha Beta › 3-Layer(aba) Sandwich › Alpha/beta knot › SPOUT methyltransferase, trefoil knot domain 0.52 37.0 2.83e-01 84.0% 49.7%
4jysB00 3.10.50.40 Alpha Beta › Roll › Chitinase A; domain 3 › 0.52 39.0 3.30e-01 98.0% 67.5%
1r5pB00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.51 41.0 3.44e-01 92.0% 87.1%
4dipH00 3.10.50.40 Alpha Beta › Roll › Chitinase A; domain 3 › 0.51 40.0 3.23e-01 98.0% 68.9%
2f4eB00 3.10.50.40 Alpha Beta › Roll › Chitinase A; domain 3 › 0.51 40.0 3.17e-01 98.0% 66.1%
3lrrA00 2.170.150.30 Mainly Beta › Beta Complex › Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A › RIG-I-like receptor, C-terminal regulatory domain 0.50 43.0 3.25e-01 96.0% 78.5%
2rqbA00 2.170.150.30 Mainly Beta › Beta Complex › Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A › RIG-I-like receptor, C-terminal regulatory domain 0.50 43.0 3.13e-01 96.0% 68.9%
3r7wC02 3.30.450.190 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.50 43.0 3.33e-01 96.0% 64.5%
1p9bA03 3.90.170.10 Alpha Beta › Alpha-Beta Complex › Adenylosuccinate Synthetase; Chain A, domain 3 › Adenylosuccinate Synthetase, subunit A, domain 3 0.50 42.0 2.98e-01 96.0% 92.7%
ECOD (55)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4958814 3457.1.1.3 alpha bundles › GxGD membrane protease › GxGD membrane protease › GxGD membrane protease › Arc_PepC_II 0.66 45.0 2.86e-01 72.0% 92.7%
3252771 821.1.1.0 a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease 0.66 56.0 4.81e-01 100.0% 83.5%
3476482 2487.1.1.7 a/b three-layered sandwiches › "The ""swivelling"" beta/beta/alpha domains" › "The ""swivelling"" beta/beta/alpha domain" › "The ""swivelling"" beta/beta/alpha domain" › PA 0.66 57.0 4.09e-01 100.0% 96.0%
4967300 304.130.1.1 a+b two layers › Alpha-beta plaits › Uncharacterized protein MK0293 N-terminal domain › Uncharacterized protein MK0293 N-terminal domain › Ni_insertion 0.65 57.0 4.80e-01 100.0% 90.6%
3404658 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.64 55.0 4.73e-01 98.0% 62.5%
4978002 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.64 49.0 3.51e-01 84.0% 76.0%
4105022 304.5.1.7 a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF2179 0.64 53.0 4.48e-01 98.0% 81.1%
3278358 284.3.1.2 a+b two layers › FKBP-like › Colicin E3 immunity protein › Colicin E3 immunity protein › DUF7683 0.63 54.0 4.82e-01 100.0% 98.7%
3587356 304.5.1.7 a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF2179 0.62 52.0 4.38e-01 100.0% 81.1%
5052820 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.61 46.0 3.19e-01 84.0% 64.7%
3234045 304.112.1.0 a+b two layers › Alpha-beta plaits › Argonaute, N-terminal domain › Argonaute, N-terminal domain 0.60 44.0 3.49e-01 84.0% 55.8%
3976575 10.12.1.0 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.59 50.0 3.68e-01 98.0% 35.6%
3331003 304.28.1.0 a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain 0.59 49.0 3.96e-01 100.0% 86.4%
4962335 3115.5.1.1 a+b two layers › GP2-like › phenylacetate-CoA oxygenase subunit PaaB › phenylacetate-CoA oxygenase subunit PaaB › PaaB 0.59 47.0 4.49e-01 100.0% 80.0%
3976564 10.12.1.0 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.59 48.0 3.50e-01 98.0% 32.0%
3407363 223.2.1.10 a+b three layers › Profilin-like › profilin-like › profilin-like › Gtr1_RagA 0.58 43.0 3.15e-01 80.0% 75.2%
3600713 10.12.1.1 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › cNMP_binding 0.58 51.0 3.64e-01 98.0% 34.5%
3270915 223.2.1.1 a+b three layers › Profilin-like › profilin-like › profilin-like › Profilin 0.58 42.0 3.16e-01 82.0% 82.1%
3416094 4081.1.1.5 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N 0.58 49.0 3.23e-01 98.0% 22.7%
3586595 221.1.1.51 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › USP7_C2 0.57 48.0 3.87e-01 100.0% 47.3%
3390426 304.163.1.1 a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain › R1_ABCA1 0.57 45.0 3.83e-01 100.0% 76.0%
4590318 11.1.1.335 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › GlgB_N 0.56 46.0 3.78e-01 98.0% 48.4%
3533739 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.56 48.0 3.68e-01 94.0% 100.0%
4406921 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.56 35.0 3.00e-01 72.0% 36.5%
3277566 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.56 45.0 4.16e-01 100.0% 97.3%
3622513 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.56 46.0 4.43e-01 100.0% 93.3%
4945480 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 49.0 3.84e-01 98.0% 47.6%
4134920 11.1.1.335 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › GlgB_N 0.56 46.0 3.64e-01 98.0% 43.8%
5080205 3115.1.1.0 a+b two layers › GP2-like › RplX-like › RplX-like 0.56 44.0 4.49e-01 100.0% 98.0%
3192910 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.55 47.0 3.30e-01 100.0% 29.1%
4960905 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.55 45.0 3.57e-01 96.0% 44.0%
3193216 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.55 40.0 3.23e-01 80.0% 71.8%
3889864 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 41.0 4.01e-01 98.0% 72.7%
4013986 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.55 45.0 3.61e-01 92.0% 100.0%
3777112 2492.1.1.1 a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › dCMP_cyt_deam_1 0.55 44.0 3.21e-01 100.0% 69.4%
5046495 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.55 47.0 3.74e-01 96.0% 55.0%
3164679 11.1.1.335 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › GlgB_N 0.54 45.0 3.63e-01 100.0% 47.0%
4929510 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.54 43.0 4.34e-01 94.0% 94.0%
5032966 284.1.1.1 a+b two layers › FKBP-like › FKBP-like › FKBP-like › FKBP_C 0.54 43.0 3.42e-01 94.0% 83.5%
3301141 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.53 45.0 3.38e-01 94.0% 96.6%
4933882 284.1.1.1 a+b two layers › FKBP-like › FKBP-like › FKBP-like › FKBP_C 0.53 44.0 3.52e-01 94.0% 82.9%
3789334 302.4.1.0 a+b two layers › Reverse ferredoxin › a+b domain in Acetophenone carboxylase (Apc) alpha subunit › a+b domain in Acetophenone carboxylase (Apc) alpha subunit 0.53 40.0 3.30e-01 88.0% 61.9%
4977323 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.53 45.0 3.36e-01 94.0% 61.6%
3599665 11.1.1.45 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Sec63 0.53 44.0 3.52e-01 100.0% 47.8%
3996654 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.52 45.0 3.46e-01 96.0% 81.8%
4018561 223.2.1.10 a+b three layers › Profilin-like › profilin-like › profilin-like › Gtr1_RagA 0.52 44.0 3.17e-01 96.0% 70.3%
3794632 223.2.1.10 a+b three layers › Profilin-like › profilin-like › profilin-like › Gtr1_RagA 0.52 44.0 3.16e-01 96.0% 57.4%
4948028 284.1.1.32 a+b two layers › FKBP-like › FKBP-like › FKBP-like › FKBP26_IF 0.52 43.0 3.44e-01 94.0% 82.9%
5058275 284.1.1.1 a+b two layers › FKBP-like › FKBP-like › FKBP-like › FKBP_C 0.52 43.0 3.17e-01 94.0% 68.1%
3397821 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.52 39.0 2.70e-01 84.0% 63.7%
4358998 223.3.1.2 a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Peptidase_S11 0.52 42.0 3.14e-01 94.0% 77.0%
4968352 302.4.1.0 a+b two layers › Reverse ferredoxin › a+b domain in Acetophenone carboxylase (Apc) alpha subunit › a+b domain in Acetophenone carboxylase (Apc) alpha subunit 0.51 43.0 3.70e-01 98.0% 57.6%
4382604 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.51 44.0 3.43e-01 96.0% 54.3%
4945987 284.1.1.32 a+b two layers › FKBP-like › FKBP-like › FKBP-like › FKBP26_IF 0.50 39.0 3.31e-01 98.0% 83.8%
3269110 10.20.1.0 beta sandwiches › jelly-roll › Jelly-roll domain in cysteine protease › Jelly-roll domain in cysteine protease 0.50 42.0 3.30e-01 96.0% 44.5%