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MT259468.1__QIW89938.1__X__00001

Bact-Vir

MT259468.1__QIW89938.1__X__00001

Identity

Accession:
MT259468 ↗
Kingdom:
phage

Quality

95.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Autographivirales› Autoscriptoviridae› Savitribaivirus› Aeromonas_phage_PS

TaxID: 2723762

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-51
PDB
Domain cluster: rep: MG592511.1__AUR90293.1__NVP1139B_58__00058__D66-128
CATH (10)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1urjA03 1.10.150.560 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 0.71 54.0 4.71e-01 86.0% 54.9%
1ji7A00 1.10.150.50 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 0.67 56.0 4.95e-01 98.0% 92.2%
3tviA01 3.40.1160.10 Alpha Beta › 3-Layer(aba) Sandwich › Carbamate kinase › Acetylglutamate kinase-like 0.65 43.0 2.68e-01 70.0% 12.6%
3szpA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 46.0 3.89e-01 98.0% 46.1%
1kaeA03 1.20.5.1300 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.59 46.0 4.51e-01 86.0% 85.5%
3rklA00 6.10.140.1640 Special › Helix non-globular › Helix Hairpins › 0.57 47.0 4.16e-01 100.0% 91.3%
3graA00 3.40.50.880 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain 0.55 40.0 2.79e-01 80.0% 87.0%
2e1mA04 3.30.160.490 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.55 37.0 4.13e-01 82.0% 97.3%
4g6tB00 6.10.20.120 Special › Helix non-globular › Arc Repressor Mutant, subunit A › 0.54 35.0 3.24e-01 80.0% 46.5%
5df7A02 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.53 42.0 2.64e-01 94.0% 93.6%
ECOD (12)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4551030 102.1.1.27 ↗ alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 0.69 58.0 4.12e-01 100.0% 70.9%
3259306 102.1.1.20 ↗ alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › IGR 0.67 52.0 4.69e-01 90.0% 78.7%
4012269 101.1.1.10 ↗ alpha arrays › HTH › HTH › Three-helical HTH › ARID 0.67 55.0 4.69e-01 98.0% 73.0%
3585427 102.1.1.7 ↗ alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › SAM_PNT 0.67 50.0 5.03e-01 82.0% 84.0%
4363302 102.1.1.0 ↗ alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.66 49.0 4.68e-01 84.0% 90.0%
3606294 102.1.1.0 ↗ alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.59 47.0 3.01e-01 94.0% 43.1%
3996748 377.1.1.0 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.58 37.0 3.62e-01 76.0% 58.2%
4959090 213.1.1.1 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.56 48.0 3.38e-01 98.0% 83.0%
3239537 376.1.1.27 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_5 0.55 44.0 3.78e-01 90.0% 65.0%
4002777 5067.1.1.3 ↗ alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Patched 0.52 42.0 2.63e-01 96.0% 18.5%
3272928 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.52 41.0 2.86e-01 94.0% 23.5%
4582469 2003.1.5.8 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Ubie_methyltran 0.51 41.0 2.98e-01 94.0% 91.9%