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MT259468.1__QIW89958.1__X__00021
Bact-VirMT259468.1__QIW89958.1__X__00021
Identity
- Accession:
- MT259468 ↗
- Kingdom:
- phage
Quality
88.1
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Autographivirales›
Autoscriptoviridae›
Savitribaivirus›
Aeromonas_phage_PS
TaxID: 2723762
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 8-60
Domain cluster:
representative
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 8fbnB01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.86 | 78.0 | 5.00e-01 | 100.0% | 25.7% |
| 2cwoA01 | 1.20.58.1200 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › RNA silencing suppressor P21, N-terminal domain | 0.82 | 71.0 | 6.35e-01 | 96.2% | 74.3% |
| 3b2eF00 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.82 | 70.0 | 6.64e-01 | 100.0% | 80.6% |
| 3m9vA03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.81 | 72.0 | 5.11e-01 | 100.0% | 39.5% |
| 2vzbB00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.80 | 73.0 | 5.04e-01 | 100.0% | 35.9% |
| 4ijjB00 | 1.20.120.910 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › DksA, coiled-coil domain | 0.79 | 71.0 | 5.28e-01 | 100.0% | 43.8% |
| 1vp7A00 | 1.10.287.1040 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Exonuclease VII, small subunit | 0.79 | 71.0 | 6.47e-01 | 98.1% | 83.8% |
| 7ztbB01 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.77 | 62.0 | 4.34e-01 | 88.7% | 31.3% |
| 6gy8A01 | 1.20.1170.10 | Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; › | 0.75 | 67.0 | 4.08e-01 | 100.0% | 46.7% |
| 3favD00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.75 | 66.0 | 5.81e-01 | 100.0% | 79.5% |
| 3sjqC00 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.75 | 67.0 | 5.81e-01 | 100.0% | 76.2% |
| 4dciA00 | 6.10.140.1110 | Special › Helix non-globular › Helix Hairpins › | 0.73 | 65.0 | 4.71e-01 | 100.0% | 40.8% |
| 4bzaA01 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.73 | 44.0 | 4.07e-01 | 94.3% | 47.1% |
| 2rkhA02 | 1.20.1280.20 | Mainly Alpha › Up-down Bundle › Monooxygenase › HscB, C-terminal domain | 0.73 | 56.0 | 5.09e-01 | 88.7% | 63.2% |
| 1tjlA00 | 1.20.120.910 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › DksA, coiled-coil domain | 0.72 | 64.0 | 4.56e-01 | 96.2% | 42.1% |
| 2kw6A00 | 6.10.140.1300 | Special › Helix non-globular › Helix Hairpins › | 0.72 | 59.0 | 5.54e-01 | 92.5% | 81.5% |
| 3lphC00 | 6.10.140.630 | Special › Helix non-globular › Helix Hairpins › | 0.68 | 56.0 | 5.49e-01 | 92.5% | 82.8% |
| 2i06A02 | 3.30.54.10 | Alpha Beta › 2-Layer Sandwich › Replication Terminator Protein; Chain A, domain 2 › | 0.66 | 48.0 | 4.23e-01 | 83.0% | 53.2% |
| 4errB00 | 1.20.58.1190 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.64 | 52.0 | 4.69e-01 | 100.0% | 83.1% |
| 3bmbA01 | 1.10.286.20 | Mainly Alpha › Orthogonal Bundle › GTP Cyclohydrolase I; Chain A, domain 1 › | 0.54 | 36.0 | 3.86e-01 | 71.7% | 83.7% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4966215 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.83 | 75.0 | 5.18e-01 | 100.0% | 36.4% |
| 4470765 | 140.1.1.25 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › PF27692 | 0.79 | 70.0 | 4.59e-01 | 98.1% | 24.2% |
| 3993029 | 604.12.1.8 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › KATNA1_MIT | 0.79 | 71.0 | 5.79e-01 | 100.0% | 55.8% |
| 4659161 | 3289.1.1.11 ↗ | alpha complex topology › Nck-associated protein 1/Cytoplasmic FMR1-interacting protein 1 › Nck-associated protein 1/Cytoplasmic FMR1-interacting protein 1 › Nck-associated protein 1/Cytoplasmic FMR1-interacting protein 1 › WASH-7_mid, WASH-4_N, WASH-7_C | 0.76 | 69.0 | 3.69e-01 | 100.0% | 6.0% |
| 4043979 | 3812.1.1.4 ↗ | alpha bundles › Type III secretion protein YscE › Type III secretion protein YscE › Type III secretion protein YscE › GrpE | 0.76 | 59.0 | 5.70e-01 | 84.9% | 80.0% |
| 3651322 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.75 | 65.0 | 3.94e-01 | 100.0% | 15.5% |
| 5030250 | 5052.1.1.0 ↗ | alpha complex topology › Proton glutamate symport protein › Proton glutamate symport protein › Proton glutamate symport protein | 0.74 | 63.0 | 3.93e-01 | 94.3% | 29.8% |
| 3224304 | 4120.1.1.30 ↗ | few secondary structure elements › Tim10/DDP › Tim10/DDP › Tim10/DDP › DUF842 | 0.73 | 62.0 | 5.23e-01 | 92.5% | 64.7% |
| 3269634 | 192.17.1.0 ↗ | alpha bundles › Long alpha-hairpin › Rabenosyn-5 Rab-binding domain-like › Rabenosyn-5 Rab-binding domain-like | 0.72 | 50.0 | 4.76e-01 | 84.9% | 63.3% |
| 5070891 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.71 | 60.0 | 5.16e-01 | 90.6% | 63.7% |
| 3199024 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.70 | 61.0 | 4.09e-01 | 100.0% | 40.0% |
| 3349325 | 5086.1.1.135 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › DUF7615 | 0.69 | 61.0 | 5.35e-01 | 100.0% | 71.2% |
| 4318288 | 621.1.1.0 ↗ | alpha bundles › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain | 0.69 | 61.0 | 4.26e-01 | 98.1% | 61.2% |
| 3530260 | 864.1.1.2 ↗ | a+b two layers › DLC › DLC › DLC › Tctex-1 | 0.66 | 48.0 | 3.82e-01 | 92.5% | 38.0% |
| 3989824 | 192.1.1.0 ↗ | alpha bundles › Long alpha-hairpin › GreA transcript cleavage protein, N-terminal domain › GreA transcript cleavage protein, N-terminal domain | 0.66 | 50.0 | 5.12e-01 | 88.7% | 94.0% |
| 3568780 | 3755.3.1.383 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › TSNAXIP1_N | 0.65 | 49.0 | 4.50e-01 | 83.0% | 68.6% |