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MT270409.1QJA43035.1X__00093

Bact-Vir

MT270409.1__QJA43035.1__X__00093

Identity

Accession:: MT270409 ↗
Kingdom:: phage

Quality

88.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Phaeobacter_phage_MD18

TaxID: 2723761

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-78

PDB

Domain cluster: representative

CATH (11)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2gfaB01	2.30.30.140	Mainly Beta › Roll › SH3 type barrels. ›	0.59	44.0	4.67e-01	97.3%	98.4%
3urgA02	2.30.30.530	Mainly Beta › Roll › SH3 type barrels. › Calcium binding protein CcbP, beta-barrel domain	0.58	43.0	4.65e-01	90.7%	96.8%
2p4tA00	2.30.30.60	Mainly Beta › Roll › SH3 type barrels. ›	0.55	40.0	4.31e-01	94.7%	100.0%
2yrvA01	2.30.30.140	Mainly Beta › Roll › SH3 type barrels. ›	0.55	41.0	3.68e-01	94.7%	54.9%
2vknA00	2.30.30.40	Mainly Beta › Roll › SH3 type barrels. › SH3 Domains	0.55	41.0	4.36e-01	89.3%	93.9%
6az1E03	2.30.30.30	Mainly Beta › Roll › SH3 type barrels. ›	0.55	38.0	3.90e-01	92.0%	77.8%
5yhoA02	3.30.1330.80	Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Hypothetical protein, similar to alpha- acetolactate decarboxylase; domain 2	0.54	47.0	4.06e-01	100.0%	86.2%
1xv2D02	3.30.1330.80	Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Hypothetical protein, similar to alpha- acetolactate decarboxylase; domain 2	0.53	46.0	3.98e-01	100.0%	86.2%
1mpyA01	3.10.180.10	Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1	0.52	30.0	2.47e-01	72.0%	26.8%
4bt2A02	3.30.1330.80	Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Hypothetical protein, similar to alpha- acetolactate decarboxylase; domain 2	0.50	42.0	3.70e-01	100.0%	89.4%
3hwuA00	3.30.1330.80	Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Hypothetical protein, similar to alpha- acetolactate decarboxylase; domain 2	0.50	41.0	3.48e-01	98.7%	80.6%

ECOD (30)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3620357	2.6.1.0 ↗	beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease	0.60	44.0	3.87e-01	80.0%	84.2%
4207556	4.1.1.58 ↗	beta barrels › SH3 › SH3 › SH3 › SH3_3	0.59	46.0	4.74e-01	85.3%	100.0%
1821014	4.1.1.70 ↗	beta barrels › SH3 › SH3 › SH3 › Tsr0524-like	0.58	45.0	4.73e-01	92.0%	100.0%
4208181	4.1.1.70 ↗	beta barrels › SH3 › SH3 › SH3 › Tsr0524-like	0.58	44.0	4.59e-01	90.7%	96.9%
3741680	4.1.1.0 ↗	beta barrels › SH3 › SH3 › SH3	0.57	40.0	4.38e-01	92.0%	100.0%
3614906	4.26.1.8 ↗	beta barrels › SH3 › Chromatin protein Cren7 › Chromatin protein Cren7 › Saf4_Yju2	0.57	42.0	4.31e-01	78.7%	98.6%
4982354	4.7.1.0 ↗	beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29	0.57	42.0	4.43e-01	90.7%	92.3%
5073368	4.1.1.0 ↗	beta barrels › SH3 › SH3 › SH3	0.56	41.0	4.24e-01	100.0%	85.7%
4650682	4.23.1.2 ↗	beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356	0.56	47.0	4.08e-01	100.0%	73.8%
4943576	4.23.1.0 ↗	beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like	0.56	47.0	4.12e-01	100.0%	77.6%
3707023	4.1.1.0 ↗	beta barrels › SH3 › SH3 › SH3	0.56	42.0	3.94e-01	85.3%	81.0%
4138935	4.1.1.241 ↗	beta barrels › SH3 › SH3 › SH3 › NifZ	0.55	44.0	4.50e-01	94.7%	98.7%
4185893	4.1.1.394 ↗	beta barrels › SH3 › SH3 › SH3 › SlpA	0.55	40.0	4.27e-01	81.3%	100.0%
4879299	219.1.1.45 ↗	a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Mac-1	0.55	48.0	3.43e-01	100.0%	43.5%
3636066	4.1.1.179 ↗	beta barrels › SH3 › SH3 › SH3 › DUF6590	0.54	47.0	3.75e-01	100.0%	86.9%
6453	4111.1.1.1 ↗	a+b two layers › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like › AAL_decarboxy	0.54	46.0	3.76e-01	100.0%	68.4%
3773104	4.1.1.0 ↗	beta barrels › SH3 › SH3 › SH3	0.54	45.0	3.85e-01	98.7%	80.7%
4093354	4.1.1.1 ↗	beta barrels › SH3 › SH3 › SH3 › SH3_1	0.53	41.0	4.26e-01	88.0%	92.9%
3701345	4.1.1.0 ↗	beta barrels › SH3 › SH3 › SH3	0.53	44.0	4.36e-01	97.3%	98.8%
4340107	4.1.1.0 ↗	beta barrels › SH3 › SH3 › SH3	0.53	40.0	4.10e-01	85.3%	96.0%
3700747	4.1.1.0 ↗	beta barrels › SH3 › SH3 › SH3	0.53	42.0	4.04e-01	89.3%	93.3%
3398585	220.1.1.0 ↗	beta barrels › PH domain-like › PH domain-like › PH domain-like	0.52	42.0	3.55e-01	89.3%	71.5%
3285829	4.1.1.425 ↗	beta barrels › SH3 › SH3 › SH3 › RNHCP	0.52	39.0	3.54e-01	81.3%	61.0%
3856441	2.6.1.0 ↗	beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease	0.52	39.0	3.47e-01	84.0%	88.3%
3492991	1.1.5.1 ↗	beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin	0.52	43.0	3.72e-01	100.0%	60.4%
3758536	4.1.1.0 ↗	beta barrels › SH3 › SH3 › SH3	0.52	39.0	4.04e-01	96.0%	91.4%
3664869	4.1.1.158 ↗	beta barrels › SH3 › SH3 › SH3 › DUF3444	0.51	44.0	3.23e-01	100.0%	70.9%
4962087	375.1.1.0 ↗	few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related	0.51	33.0	3.55e-01	80.0%	83.3%
3664711	252.1.1.2 ↗	a+b two layers › DNA-binding domain › Methyl-CpG-binding domain, MBD › Methyl-CpG-binding domain, MBD › DUF7028	0.51	29.0	3.14e-01	72.0%	64.6%
3485102	1.1.17.1 ↗	beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin	0.51	42.0	3.54e-01	100.0%	55.9%