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MT270409.1__QJA43130.1__X__00188

Bact-Vir

MT270409.1__QJA43130.1__X__00188

Identity

Accession:
MT270409 ↗
Kingdom:
phage

Quality

64.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-43
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF07750.18 best GcrA 47.7 3.30e-12 100.0% 25.2%
CATH (35)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3zqcA02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.94 86.0 7.17e-01 100.0% 64.1%
1tc3C00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.93 82.0 7.45e-01 100.0% 74.5%
1gv2A02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.91 82.0 7.76e-01 100.0% 89.1%
2llkA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.89 80.0 7.94e-01 100.0% 95.1%
3osgA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.89 78.0 6.74e-01 100.0% 68.3%
1a04A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.89 74.0 5.84e-01 100.0% 46.3%
3vfzB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.85 74.0 6.35e-01 100.0% 61.9%
5f64A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.84 69.0 5.64e-01 100.0% 49.3%
2q0oA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.84 72.0 6.05e-01 100.0% 56.7%
2lfwA01 1.20.140.160 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain 0.83 71.0 4.84e-01 100.0% 27.7%
2yusA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.82 70.0 6.40e-01 100.0% 75.5%
2dbbB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 72.0 6.40e-01 100.0% 72.7%
2ia0A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 69.0 6.26e-01 100.0% 74.1%
4u7bA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 67.0 6.79e-01 94.9% 97.4%
7s03A01 1.10.10.1450 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.80 66.0 6.22e-01 97.4% 96.0%
5xsoA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 67.0 5.42e-01 100.0% 50.0%
4cvnA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.78 56.0 3.56e-01 76.9% 50.8%
1j1vA00 1.10.1750.10 Mainly Alpha › Orthogonal Bundle › Chromosomal Replication Initiator Protein Dnaa; Chain: A; › DnaA protein, C-terminal DNA-binding domain 0.78 67.0 5.06e-01 100.0% 41.5%
2cfxA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 66.0 6.13e-01 100.0% 80.0%
5xe7A01 1.20.140.160 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain 0.77 66.0 4.53e-01 100.0% 28.2%
2cobA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.77 63.0 6.19e-01 100.0% 86.4%
2k9sA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.73 59.0 4.46e-01 100.0% 44.9%
1xc5A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.73 58.0 5.59e-01 100.0% 85.4%
3onqA03 1.10.10.2840 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › PucR C-terminal helix-turn-helix domain 0.73 61.0 4.30e-01 100.0% 29.8%
5dukB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 61.0 5.16e-01 100.0% 58.2%
1cf7A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 59.0 5.07e-01 100.0% 64.2%
4mloA03 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.69 56.0 5.00e-01 100.0% 65.6%
1k6yA01 1.10.10.200 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Integrase, N-terminal zinc-binding domain 0.69 56.0 5.39e-01 97.4% 82.6%
1gkrA02 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.67 52.0 3.05e-01 87.2% 41.2%
7n1nB01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.67 52.0 4.53e-01 89.7% 58.7%
2o38A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.66 55.0 4.79e-01 100.0% 61.5%
5cz2G00 1.10.10.200 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Integrase, N-terminal zinc-binding domain 0.64 48.0 4.85e-01 94.9% 90.2%
7u32G01 1.10.10.200 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Integrase, N-terminal zinc-binding domain 0.63 49.0 4.58e-01 97.4% 67.9%
2jucA00 1.10.10.440 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › FF domain 0.58 45.0 4.19e-01 97.4% 83.6%
4fcgA00 3.80.10.10 Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor 0.53 44.0 2.66e-01 94.9% 18.6%
ECOD (75)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5004841 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.98 89.0 7.30e-01 100.0% 58.5%
3201282 101.1.1.3 alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-binding 0.97 90.0 7.42e-01 100.0% 61.5%
3174756 101.1.1.67 alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_6 0.96 87.0 7.21e-01 100.0% 61.5%
3990848 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.96 85.0 7.48e-01 100.0% 69.1%
3205204 101.1.1.67 alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_6 0.96 87.0 7.73e-01 100.0% 72.2%
3724374 101.1.1.3 alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-binding 0.95 86.0 6.81e-01 100.0% 52.0%
3945880 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.95 84.0 7.39e-01 100.0% 69.1%
4019885 101.1.1.3 alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-binding 0.95 86.0 7.55e-01 100.0% 72.7%
3210083 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.94 85.0 7.26e-01 100.0% 66.7%
4999211 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.93 84.0 7.95e-01 100.0% 84.4%
3721414 101.1.1.67 alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_6 0.93 84.0 7.98e-01 100.0% 88.9%
3181041 101.1.1.67 alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_6 0.93 83.0 7.94e-01 100.0% 91.1%
3803815 101.1.1.3 alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-binding 0.92 82.0 6.40e-01 100.0% 50.0%
3757222 101.1.1.3 alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-binding 0.91 80.0 7.16e-01 100.0% 72.7%
3908843 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.90 81.0 6.77e-01 100.0% 62.5%
3281912 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.89 81.0 7.07e-01 97.4% 69.1%
3668069 101.1.1.3 alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-binding 0.89 79.0 6.82e-01 100.0% 66.7%
3378419 101.1.1.3 alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-binding 0.89 79.0 5.94e-01 100.0% 44.4%
1878961 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.89 77.0 7.52e-01 97.4% 90.7%
3771267 101.1.1.3 alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-binding 0.89 78.0 6.42e-01 100.0% 57.1%
3744347 101.1.1.3 alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-binding 0.88 78.0 6.11e-01 100.0% 50.0%
3320092 101.1.1.276 alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-binding, Myb_DNA-bind_6 0.88 77.0 5.20e-01 100.0% 47.9%
3798378 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.86 74.0 6.02e-01 100.0% 53.3%
3941460 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.86 73.0 6.19e-01 100.0% 58.5%
3314993 101.1.1.3 alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-binding 0.85 73.0 6.58e-01 100.0% 72.7%
4197050 101.1.6.4 alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.85 73.0 5.29e-01 100.0% 36.2%
3930711 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.84 72.0 6.94e-01 100.0% 86.7%
4212645 101.1.6.31 alpha arrays › HTH › HTH › TrpR › Phage_integrase 0.83 69.0 6.87e-01 100.0% 95.0%
3914141 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.83 69.0 6.31e-01 100.0% 72.7%
3290335 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.83 70.0 5.94e-01 100.0% 58.5%
3957642 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.82 71.0 6.41e-01 100.0% 70.9%
4606105 101.1.6.4 alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.82 71.0 5.30e-01 100.0% 39.0%
3588286 101.1.1.63 alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 0.82 71.0 6.58e-01 100.0% 80.0%
2035807 101.1.1.3 alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-binding 0.82 70.0 5.95e-01 100.0% 60.6%
4583223 101.1.1.63 alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 0.82 72.0 6.41e-01 100.0% 70.9%
3943148 101.1.1.63 alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 0.82 71.0 6.57e-01 100.0% 78.0%
4934485 101.1.1.107 alpha arrays › HTH › HTH › Three-helical HTH › DUF134 0.82 70.0 5.67e-01 100.0% 51.4%
3442013 101.1.6.0 alpha arrays › HTH › HTH › TrpR 0.81 69.0 5.25e-01 100.0% 42.1%
4937493 101.1.1.25 alpha arrays › HTH › HTH › Three-helical HTH › DUF433 0.81 71.0 6.17e-01 100.0% 83.3%
5013305 101.1.8.0 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.81 70.0 6.51e-01 100.0% 78.0%
3787785 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.80 68.0 6.58e-01 100.0% 86.7%
3816838 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.80 68.0 5.35e-01 100.0% 47.1%
3587926 101.1.1.63 alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 0.80 68.0 6.17e-01 100.0% 70.9%
3318615 101.1.1.272 alpha arrays › HTH › HTH › Three-helical HTH › DUF7952 0.80 66.0 6.03e-01 100.0% 74.5%
3965313 101.1.1.63 alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 0.80 68.0 6.17e-01 100.0% 70.9%
5047233 101.1.2.140 alpha arrays › HTH › HTH › winged helix domain › HTH_AsnC-type 0.80 68.0 6.17e-01 100.0% 72.7%
4067934 101.1.6.4 alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.79 68.0 5.23e-01 100.0% 43.3%
3263074 101.1.1.3 alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-binding 0.79 65.0 5.53e-01 100.0% 57.1%
4618625 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.79 68.0 4.99e-01 100.0% 41.0%
3288492 101.1.1.13 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.79 66.0 6.38e-01 100.0% 84.4%
5080070 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.78 66.0 5.94e-01 97.4% 69.1%
3726460 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.78 64.0 5.70e-01 100.0% 66.7%
3969487 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.77 63.0 6.04e-01 100.0% 83.7%
3945774 101.1.1.58 alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 0.77 64.0 6.02e-01 100.0% 80.0%
3943189 101.1.1.58 alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 0.77 66.0 5.93e-01 100.0% 85.5%
4937291 101.1.1.371 alpha arrays › HTH › HTH › Three-helical HTH › UPF0175 0.77 63.0 6.17e-01 100.0% 86.7%
3948900 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.77 66.0 5.37e-01 100.0% 66.7%
3515936 101.1.1.63 alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 0.76 63.0 5.62e-01 100.0% 65.0%
5047812 101.29.1.0 alpha arrays › HTH › helical bundles in heme iron utilization protein-like › helical bundles in heme iron utilization protein-like 0.76 63.0 5.59e-01 100.0% 65.0%
4938759 101.1.8.14 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › UPF0175 0.75 62.0 5.69e-01 100.0% 70.9%
5042123 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.75 65.0 5.29e-01 100.0% 61.3%
4044443 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.75 62.0 5.68e-01 100.0% 72.7%
3279456 101.1.1.58 alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 0.75 61.0 5.77e-01 100.0% 82.0%
3980478 101.1.1.63 alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 0.75 63.0 4.76e-01 100.0% 39.0%
3984767 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.74 59.0 5.37e-01 100.0% 68.3%
4173465 101.1.8.0 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.73 59.0 5.46e-01 100.0% 69.1%
1738816 101.1.1.14 alpha arrays › HTH › HTH › Three-helical HTH › Integrase_Zn 0.72 55.0 5.38e-01 89.7% 81.8%
4119313 101.1.1.13 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.72 58.0 5.37e-01 100.0% 70.9%
3982083 101.1.1.58 alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 0.71 56.0 5.35e-01 97.4% 78.0%
4056923 101.1.2.110 alpha arrays › HTH › HTH › winged helix domain › HTH_IclR 0.71 56.0 4.88e-01 100.0% 57.1%
3793382 101.1.10.0 alpha arrays › HTH › HTH › Cyclin-like 0.70 56.0 4.34e-01 100.0% 40.0%
4944836 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.67 54.0 4.78e-01 100.0% 66.2%
3761218 101.28.1.0 alpha arrays › HTH › helical bundles in FlhC-like proteins › helical bundles in FlhC-like proteins 0.63 47.0 4.66e-01 100.0% 80.0%
4929481 102.2.1.0 alpha arrays › HhH/H2TH › H2TH › H2TH 0.62 51.0 4.21e-01 100.0% 65.0%
3882189 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.61 46.0 4.51e-01 97.4% 78.0%