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MT310852.1__QJD49774.1__SEA_CLUBPENGUIN_50__00050
Bact-VirMT310852.1__QJD49774.1__SEA_CLUBPENGUIN_50__00050
Identity
- Accession:
- MT310852 ↗
- Kingdom:
- phage
Quality
78.0
mean pLDDT
Taxonomy
TaxID: 2725618
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 42-95
Domain cluster:
rep: MT310852.1__QJD49807.1__SEA_CLUBPENGUIN_83__00083__D10-62
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1wjvA01 | 3.30.1490.490 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › | 0.70 | 54.0 | 5.56e-01 | 100.0% | 92.2% |
| 1wh2A01 | 3.30.1490.40 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › GYF domain | 0.67 | 57.0 | 5.57e-01 | 100.0% | 90.2% |
| 4nwbA01 | 3.30.70.1730 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein L10, N-terminal RNA-binding domain | 0.67 | 53.0 | 4.01e-01 | 88.9% | 81.8% |
| 3fmaA00 | 3.30.1490.40 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › GYF domain | 0.65 | 55.0 | 4.93e-01 | 100.0% | 88.9% |
| 2krxA01 | 3.90.940.40 | Alpha Beta › Alpha-Beta Complex › Eukaryotic RPB6 RNA polymerase subunit › Protein CHLORORESPIRATORY REDUCTION 7 | 0.65 | 44.0 | 4.05e-01 | 72.2% | 100.0% |
| 3ll3B01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.64 | 52.0 | 3.41e-01 | 92.6% | 50.2% |
| 2hpuA01 | 3.30.70.2060 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.61 | 48.0 | 4.64e-01 | 90.7% | 100.0% |
| 2carB00 | 3.90.950.10 | Alpha Beta › Alpha-Beta Complex › Maf protein › | 0.60 | 50.0 | 3.53e-01 | 100.0% | 47.4% |
| 2x7iA02 | 3.30.70.890 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GHMP kinase, C-terminal domain | 0.60 | 41.0 | 3.28e-01 | 75.9% | 96.9% |
| 3e7wA01 | 3.40.50.12780 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain | 0.59 | 44.0 | 2.76e-01 | 90.7% | 35.3% |
| 4jgjA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 44.0 | 3.69e-01 | 88.9% | 70.6% |
| 4lesA00 | 2.60.40.1240 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.57 | 46.0 | 3.40e-01 | 88.9% | 51.4% |
| 1x4rA01 | 3.30.720.50 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.55 | 38.0 | 3.49e-01 | 75.9% | 82.3% |
| 5jx2A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.54 | 46.0 | 3.22e-01 | 98.1% | 97.3% |
| 4gr4C02 | 3.40.50.12780 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain | 0.53 | 43.0 | 2.60e-01 | 92.6% | 14.9% |
| 5u81A01 | 3.60.60.10 | Alpha Beta › 4-Layer Sandwich › Penicillin V Acylase; Chain A › Penicillin V Acylase; Chain A | 0.53 | 42.0 | 2.83e-01 | 98.1% | 35.1% |
| 5e7qA01 | 3.40.50.12780 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain | 0.52 | 42.0 | 2.60e-01 | 96.3% | 16.2% |
| 4ak8A00 | 3.10.100.10 | Alpha Beta › Roll › Mannose-Binding Protein A; Chain A › Mannose-Binding Protein A, subunit A | 0.52 | 39.0 | 3.20e-01 | 92.6% | 76.9% |
| 2c60A01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.51 | 41.0 | 3.73e-01 | 94.4% | 98.7% |
ECOD (37)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3738773 | 822.1.1.1 ↗ | a+b two layers › GYF/BRK domain-like › GYF domain › GYF domain › GYF | 0.73 | 63.0 | 6.31e-01 | 100.0% | 100.0% |
| 3303628 | 822.1.1.3 ↗ | a+b two layers › GYF/BRK domain-like › GYF domain › GYF domain › GYF_ATXR3 | 0.71 | 59.0 | 6.07e-01 | 94.4% | 100.0% |
| 3227231 | 822.1.1.1 ↗ | a+b two layers › GYF/BRK domain-like › GYF domain › GYF domain › GYF | 0.70 | 60.0 | 5.74e-01 | 100.0% | 95.2% |
| 3458276 | 822.1.1.1 ↗ | a+b two layers › GYF/BRK domain-like › GYF domain › GYF domain › GYF | 0.69 | 58.0 | 5.56e-01 | 98.1% | 84.6% |
| 3619550 | 376.1.1.5 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-UBP | 0.67 | 53.0 | 4.25e-01 | 98.1% | 42.6% |
| 3712580 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.67 | 50.0 | 4.04e-01 | 90.7% | 43.0% |
| 4024679 | 822.1.1.1 ↗ | a+b two layers › GYF/BRK domain-like › GYF domain › GYF domain › GYF | 0.66 | 56.0 | 5.45e-01 | 100.0% | 98.3% |
| 3924848 | 822.1.1.1 ↗ | a+b two layers › GYF/BRK domain-like › GYF domain › GYF domain › GYF | 0.65 | 55.0 | 5.04e-01 | 100.0% | 77.3% |
| 4932504 | 2492.1.1.0 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like | 0.64 | 56.0 | 4.61e-01 | 98.1% | 66.3% |
| 3804735 | 822.1.1.3 ↗ | a+b two layers › GYF/BRK domain-like › GYF domain › GYF domain › GYF_ATXR3 | 0.63 | 50.0 | 4.96e-01 | 100.0% | 83.1% |
| 3911109 | 386.1.1.290 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › Zf-C2H2_ZNF451_C | 0.62 | 48.0 | 4.15e-01 | 92.6% | 54.1% |
| 4483288 | 2492.1.1.0 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like | 0.61 | 54.0 | 4.43e-01 | 100.0% | 62.0% |
| 4581597 | 2492.1.1.0 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like | 0.61 | 53.0 | 4.41e-01 | 98.1% | 64.2% |
| 4276062 | 2492.1.1.0 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like | 0.59 | 52.0 | 4.41e-01 | 100.0% | 66.7% |
| 4298719 | 376.1.1.37 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › SLX1_C | 0.58 | 42.0 | 3.54e-01 | 79.6% | 61.0% |
| 4004116 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.58 | 40.0 | 3.39e-01 | 75.9% | 55.0% |
| 4586910 | 376.1.1.37 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › SLX1_C | 0.57 | 41.0 | 3.81e-01 | 79.6% | 77.3% |
| 3877617 | 376.1.1.37 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › SLX1_C | 0.56 | 40.0 | 3.59e-01 | 79.6% | 67.1% |
| 4266756 | 376.1.1.37 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › SLX1_C | 0.56 | 40.0 | 3.56e-01 | 79.6% | 70.6% |
| 3739219 | 7.1.1.0 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain | 0.56 | 45.0 | 3.60e-01 | 94.4% | 42.5% |
| 5042767 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.55 | 38.0 | 3.17e-01 | 74.1% | 50.0% |
| 3937568 | 376.1.1.37 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › SLX1_C | 0.54 | 38.0 | 3.46e-01 | 79.6% | 70.6% |
| 3706177 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.54 | 49.0 | 3.28e-01 | 100.0% | 42.0% |
| 3713070 | 2003.1.2.58 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox, Pyr_redox_2 | 0.54 | 49.0 | 2.84e-01 | 100.0% | 18.1% |
| 3805842 | 304.112.1.3 ↗ | a+b two layers › Alpha-beta plaits › Argonaute, N-terminal domain › Argonaute, N-terminal domain › ArgoN | 0.54 | 37.0 | 3.29e-01 | 74.1% | 63.5% |
| 3562527 | 386.1.1.358 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › Zf-C2H2_ZNF451 | 0.54 | 45.0 | 4.43e-01 | 98.1% | 86.7% |
| None | — | 0.53 | 45.0 | 4.41e-01 | 98.1% | 86.7% | |
| 3620075 | 376.1.1.37 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › SLX1_C | 0.53 | 38.0 | 3.29e-01 | 79.6% | 66.3% |
| 5038375 | 4081.1.1.2 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › VIT | 0.53 | 40.0 | 2.81e-01 | 85.2% | 25.5% |
| 3926188 | 376.1.2.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_1 | 0.52 | 40.0 | 3.67e-01 | 100.0% | 64.3% |
| 5062701 | 304.128.1.0 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in periplasmic region of MacB › ferredoxin-like domain in periplasmic region of MacB | 0.52 | 43.0 | 3.59e-01 | 100.0% | 90.5% |
| 4955161 | 601.7.2.1 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › HEPN domain in CRISPR-associated protein Csx1 › Csx1_HEPN | 0.52 | 40.0 | 3.16e-01 | 87.0% | 91.2% |
| 3503568 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.52 | 38.0 | 3.49e-01 | 98.1% | 56.5% |
| 3841511 | 101.1.1.384 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › ADNP_N | 0.51 | 39.0 | 2.88e-01 | 85.2% | 28.7% |
| 5018373 | 842.1.1.0 ↗ | a+b two layers › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 | 0.51 | 43.0 | 2.96e-01 | 100.0% | 66.2% |
| 167709 | 4224.1.1.1 ↗ | few secondary structure elements › CHY zinc finger › CHY zinc finger › CHY zinc finger › zf-CHY | 0.51 | 44.0 | 3.88e-01 | 100.0% | 69.5% |
| 2083521 | 329.1.1.1 ↗ | a+b two layers › Prokaryotic AspRS, insert domain › Prokaryotic AspRS, insert domain › Prokaryotic AspRS, insert domain › GAD | 0.50 | 36.0 | 2.91e-01 | 81.5% | 54.4% |