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MT310858.1__QJD50288.1__SEA_IWOKEUPLIKEDIS_85__00085

Bact-Vir

MT310858.1__QJD50288.1__SEA_IWOKEUPLIKEDIS_85__00085

Identity

Accession:
MT310858 ↗
Kingdom:
phage

Quality

75.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Turbidovirus› Mycobacterium_phage_Iwokeuplikedis

TaxID: 2725624

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-57
PDB
Domain cluster: representative
CATH (12)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3cz8A02 3.10.50.10 Alpha Beta › Roll › Chitinase A; domain 3 › 0.61 42.0 4.18e-01 100.0% 68.4%
4c1sA00 1.50.10.20 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.56 49.0 2.98e-01 100.0% 84.0%
3alfA02 3.10.50.10 Alpha Beta › Roll › Chitinase A; domain 3 › 0.56 43.0 3.94e-01 100.0% 64.3%
5axmB00 3.30.70.3000 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › tRNA(His) guanylyltransferase (Thg1) 0.55 41.0 2.75e-01 83.0% 82.8%
1oi2A02 3.30.1180.20 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › Dihydroxyacetone kinase; domain 2 0.55 43.0 3.08e-01 84.9% 93.2%
6swc801 3.30.30.170 Alpha Beta › 2-Layer Sandwich › Defensin A-like › 0.55 37.0 2.95e-01 73.6% 31.0%
4yleA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.55 37.0 2.80e-01 71.7% 47.9%
2hqyA01 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.53 44.0 3.35e-01 94.3% 71.5%
2r44A02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.51 40.0 2.80e-01 83.0% 69.5%
3llcA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.51 39.0 2.61e-01 88.7% 81.6%
3zcoA00 1.10.10.2450 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.51 40.0 3.20e-01 96.2% 68.5%
3a1cA02 3.40.1110.10 Alpha Beta › 3-Layer(aba) Sandwich › Calcium-transporting ATPase, cytoplasmic domain N › Calcium-transporting ATPase, cytoplasmic domain N 0.50 40.0 3.25e-01 96.2% 80.3%
ECOD (22)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3629581 7512.1.1.6 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_20 0.65 53.0 3.32e-01 90.6% 35.8%
4999932 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.64 42.0 3.55e-01 98.1% 40.0%
4507638 101.1.2.31 ↗ alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.61 42.0 3.00e-01 71.7% 95.2%
4500525 284.2.1.0 ↗ a+b two layers › FKBP-like › Chitinase insertion domain › Chitinase insertion domain 0.59 40.0 4.05e-01 100.0% 70.9%
3710958 1128.1.1.0 ↗ alpha bundles › LYR protein › LYR protein › LYR protein 0.56 44.0 3.68e-01 98.1% 48.4%
4261505 284.2.1.0 ↗ a+b two layers › FKBP-like › Chitinase insertion domain › Chitinase insertion domain 0.56 40.0 3.86e-01 100.0% 64.6%
415434 284.2.1.0 ↗ a+b two layers › FKBP-like › Chitinase insertion domain › Chitinase insertion domain 0.56 42.0 3.92e-01 100.0% 63.4%
4345162 304.48.1.11 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RNA_pol 0.55 38.0 2.88e-01 77.4% 69.4%
4999182 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.55 42.0 3.81e-01 84.9% 89.3%
4672979 140.1.1.0 ↗ alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 0.55 44.0 3.15e-01 96.2% 30.3%
4266054 101.1.2.90 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_9 0.55 38.0 3.52e-01 73.6% 91.4%
3655450 314.1.1.2 ↗ a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_2b 0.55 47.0 2.79e-01 100.0% 90.4%
4652240 140.1.1.17 ↗ alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › CysS_C 0.55 44.0 3.08e-01 96.2% 28.5%
None — 0.55 44.0 3.03e-01 96.2% 26.1%
3971794 304.7.1.0 ↗ a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors 0.55 37.0 3.08e-01 81.1% 40.0%
3654794 314.1.1.2 ↗ a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_2b 0.54 41.0 2.36e-01 81.1% 30.3%
3553689 101.1.2.22 ↗ alpha arrays › HTH › HTH › winged helix domain › PCI 0.54 38.0 3.38e-01 75.5% 56.0%
3204071 206.1.1.1 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.53 48.0 2.84e-01 100.0% 52.3%
4936151 881.1.1.0 ↗ a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.50 41.0 3.07e-01 100.0% 54.4%
4417105 2004.1.1.77 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF87,HerA_C 0.50 45.0 2.68e-01 100.0% 44.6%
4013689 284.2.1.0 ↗ a+b two layers › FKBP-like › Chitinase insertion domain › Chitinase insertion domain 0.50 42.0 3.07e-01 98.1% 62.0%
5062064 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.50 39.0 3.54e-01 92.5% 78.2%