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MT310871.1__QJD51423.1__SEA_JACKSTINA_24__00024
Bact-VirMT310871.1__QJD51423.1__SEA_JACKSTINA_24__00024
Identity
- Accession:
- MT310871 ↗
- Kingdom:
- phage
Quality
69.7
mean pLDDT
Taxonomy
TaxID: 2725633
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-57_93-138_192-202
Domain cluster:
rep: OP596612.1__WAX24274.1__X__00021__D3-155
CATH (41)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3c4bA02 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.71 | 30.0 | 3.85e-01 | 94.7% | 65.7% |
| 4g59C01 | 2.60.40.2920 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.68 | 44.0 | 4.57e-01 | 99.1% | 70.9% |
| 5wl1A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.68 | 41.0 | 4.35e-01 | 84.2% | 68.3% |
| 8hbfB01 | 3.90.1520.10 | Alpha Beta › Alpha-Beta Complex › H-NOX domain › H-NOX domain | 0.65 | 49.0 | 4.20e-01 | 99.1% | 49.7% |
| 1dr9A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.63 | 38.0 | 4.12e-01 | 83.3% | 71.6% |
| 3m5kA00 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.63 | 57.0 | 5.03e-01 | 100.0% | 76.2% |
| 2wngA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.62 | 36.0 | 4.08e-01 | 79.8% | 74.7% |
| 3a7fA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.62 | 39.0 | 4.28e-01 | 95.6% | 77.4% |
| 4d9uA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.62 | 37.0 | 4.15e-01 | 94.7% | 77.3% |
| 1ie0A00 | 3.30.1360.80 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › S-ribosylhomocysteinase (LuxS) | 0.61 | 41.0 | 3.77e-01 | 78.9% | 51.3% |
| 2gysA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.61 | 37.0 | 4.20e-01 | 81.6% | 81.4% |
| 1vi7A01 | 3.30.230.30 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › Impact, N-terminal domain | 0.60 | 46.0 | 4.40e-01 | 81.6% | 72.6% |
| 5jzjA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.59 | 38.0 | 4.08e-01 | 95.6% | 76.6% |
| 3kulA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.59 | 38.0 | 4.26e-01 | 92.1% | 84.3% |
| 2xzsA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.59 | 38.0 | 4.16e-01 | 94.7% | 81.3% |
| 1o0vA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 38.0 | 3.86e-01 | 84.2% | 67.3% |
| 6ya6A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.58 | 37.0 | 3.93e-01 | 91.2% | 73.5% |
| 1y4uB01 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.58 | 50.0 | 4.27e-01 | 98.2% | 68.0% |
| 4c0tA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.58 | 38.0 | 4.11e-01 | 95.6% | 81.5% |
| 5i4nA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.57 | 38.0 | 4.16e-01 | 94.7% | 84.8% |
| 1vluA01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.56 | 42.0 | 3.28e-01 | 78.1% | 74.5% |
| 3tf8B00 | 3.90.1520.10 | Alpha Beta › Alpha-Beta Complex › H-NOX domain › H-NOX domain | 0.56 | 43.0 | 3.66e-01 | 98.2% | 50.0% |
| 4qnyA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.56 | 38.0 | 3.81e-01 | 94.7% | 67.2% |
| 2eixA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.56 | 35.0 | 3.64e-01 | 91.2% | 67.0% |
| 4fo9A01 | 2.60.120.780 | Mainly Beta › Sandwich › Jelly Rolls › PINIT domain | 0.56 | 42.0 | 3.86e-01 | 78.1% | 100.0% |
| 2z7rA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.56 | 33.0 | 3.67e-01 | 93.0% | 76.2% |
| 3clwC01 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.55 | 43.0 | 4.53e-01 | 98.2% | 96.0% |
| 1qfjA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.55 | 33.0 | 3.62e-01 | 90.4% | 73.6% |
| 4d0qA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.55 | 45.0 | 4.08e-01 | 90.4% | 85.1% |
| 4gt8A00 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.55 | 49.0 | 4.72e-01 | 100.0% | 92.5% |
| 2y7jA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.54 | 37.0 | 4.05e-01 | 94.7% | 88.9% |
| 2g30A01 | 2.60.40.1150 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 38.0 | 3.84e-01 | 99.1% | 70.9% |
| 1ir3A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.54 | 36.0 | 3.87e-01 | 94.7% | 81.1% |
| 4acvA00 | 3.30.2000.30 | Alpha Beta › 2-Layer Sandwich › STM4215-like › | 0.54 | 48.0 | 4.75e-01 | 100.0% | 95.8% |
| 3eeeA00 | 3.90.1520.10 | Alpha Beta › Alpha-Beta Complex › H-NOX domain › H-NOX domain | 0.54 | 41.0 | 3.48e-01 | 94.7% | 48.9% |
| 1u4dA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.53 | 33.0 | 3.67e-01 | 93.9% | 81.9% |
| 1qlmA02 | 3.30.1030.10 | Alpha Beta › 2-Layer Sandwich › Methenyltetrahydromethanopterin Cyclohydrolase; Chain A, domain 2 › Methenyltetrahydromethanopterin Cyclohydrolase; Chain A, domain 2 | 0.52 | 45.0 | 3.86e-01 | 98.2% | 97.5% |
| 1jsgA00 | 2.40.15.10 | Mainly Beta › Beta Barrel › Proto-oncogene - Oncogene Product P14tcl1 › TCL1/MTCP1 | 0.51 | 40.0 | 4.06e-01 | 96.5% | 84.7% |
| 6fexA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.51 | 36.0 | 3.84e-01 | 94.7% | 84.8% |
| 3es4A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.51 | 41.0 | 4.11e-01 | 95.6% | 85.3% |
| 4jzjC02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 37.0 | 3.85e-01 | 99.1% | 82.7% |
ECOD (50)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3964190 | 310.3.1.3 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related › PilN | 0.69 | 44.0 | 3.92e-01 | 100.0% | 44.8% |
| 3971474 | 225.1.1.3 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c | 0.67 | 50.0 | 4.73e-01 | 100.0% | 65.0% |
| 4977026 | 873.1.1.1 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › V4R | 0.66 | 50.0 | 4.74e-01 | 99.1% | 67.4% |
| 4581673 | 225.1.1.3 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c | 0.66 | 50.0 | 4.65e-01 | 100.0% | 64.3% |
| 5055367 | 304.12.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 | 0.66 | 46.0 | 4.97e-01 | 98.2% | 87.4% |
| 4010324 | 225.1.1.3 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c | 0.65 | 50.0 | 4.68e-01 | 100.0% | 65.7% |
| 3981576 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.65 | 50.0 | 4.14e-01 | 100.0% | 45.9% |
| 4943870 | 873.1.1.0 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain | 0.65 | 48.0 | 4.79e-01 | 98.2% | 76.5% |
| 3961615 | 225.1.1.6 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c_2 | 0.64 | 47.0 | 4.76e-01 | 99.1% | 76.5% |
| 4957772 | 873.1.1.0 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain | 0.64 | 50.0 | 4.35e-01 | 98.2% | 55.3% |
| 3988442 | 225.1.1.3 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c | 0.64 | 48.0 | 4.48e-01 | 100.0% | 64.3% |
| 3531830 | 11.1.1.363 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_3 | 0.61 | 39.0 | 3.97e-01 | 85.1% | 66.4% |
| 3286415 | 225.1.1.3 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c | 0.61 | 45.0 | 4.23e-01 | 100.0% | 62.5% |
| 3630348 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.60 | 40.0 | 2.35e-01 | 94.7% | 7.9% |
| 4196274 | 305.1.1.1 ↗ | a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L | 0.59 | 41.0 | 4.09e-01 | 80.7% | 69.6% |
| 5051036 | 310.3.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related | 0.59 | 53.0 | 4.47e-01 | 100.0% | 64.1% |
| 3205249 | 222.1.1.4 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT | 0.58 | 46.0 | 4.28e-01 | 86.8% | 97.3% |
| 5052337 | 304.165.1.0 ↗ | a+b two layers › Alpha-beta plaits › Uncharacterized protein Ta1207 › Uncharacterized protein Ta1207 | 0.58 | 38.0 | 3.63e-01 | 98.2% | 54.3% |
| 3217790 | 864.1.1.3 ↗ | a+b two layers › DLC › DLC › DLC › Ground-like | 0.58 | 35.0 | 4.31e-01 | 98.2% | 98.6% |
| 5060335 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.58 | 37.0 | 2.77e-01 | 95.6% | 24.4% |
| 3934937 | 873.1.1.5 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › HNOB | 0.57 | 48.0 | 4.06e-01 | 100.0% | 54.2% |
| 5023022 | 1137.1.1.0 ↗ | a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain | 0.56 | 36.0 | 3.99e-01 | 100.0% | 81.1% |
| 3163896 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.56 | 51.0 | 4.17e-01 | 100.0% | 59.5% |
| 3977348 | 225.1.1.3 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c | 0.56 | 51.0 | 4.77e-01 | 100.0% | 89.3% |
| 4930268 | 1137.1.1.1 ↗ | a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain › TP_methylase | 0.56 | 41.0 | 4.25e-01 | 100.0% | 80.0% |
| 4982262 | 243.5.1.0 ↗ | a+b two layers › Cystatin-like › Amine oxidase N-terminal region › Amine oxidase N-terminal region | 0.56 | 31.0 | 3.66e-01 | 100.0% | 80.0% |
| 3707819 | 12.1.1.34 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Glyco_hydro38C2 | 0.56 | 43.0 | 4.58e-01 | 95.6% | 95.0% |
| 5052852 | 873.1.1.0 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain | 0.56 | 50.0 | 4.28e-01 | 100.0% | 67.4% |
| 5066600 | 873.1.1.1 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › V4R | 0.56 | 42.0 | 3.74e-01 | 100.0% | 54.1% |
| 3786767 | 327.11.2.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 | 0.56 | 38.0 | 3.97e-01 | 93.0% | 76.2% |
| 5019905 | 1137.1.1.0 ↗ | a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain | 0.55 | 42.0 | 4.36e-01 | 100.0% | 86.7% |
| 4107956 | 1137.1.1.0 ↗ | a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain | 0.55 | 44.0 | 4.39e-01 | 100.0% | 81.7% |
| 3889987 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 44.0 | 3.92e-01 | 86.8% | 93.9% |
| 4429140 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.55 | 49.0 | 4.01e-01 | 100.0% | 57.2% |
| 3948757 | 1137.1.1.0 ↗ | a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain | 0.54 | 39.0 | 4.09e-01 | 100.0% | 84.0% |
| 4031084 | 225.1.1.3 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c | 0.54 | 49.0 | 4.72e-01 | 100.0% | 94.6% |
| 3264977 | 11.1.1.843 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7034 | 0.54 | 38.0 | 3.75e-01 | 86.0% | 68.3% |
| 5011708 | 1137.1.1.1 ↗ | a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain › TP_methylase | 0.54 | 37.0 | 3.90e-01 | 100.0% | 79.0% |
| 3695421 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 38.0 | 3.67e-01 | 86.0% | 66.2% |
| 3746419 | 314.1.1.9 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_His | 0.52 | 47.0 | 3.34e-01 | 100.0% | 87.3% |
| 3893165 | 10.4.1.23 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CDCP1_CUB_6 | 0.52 | 41.0 | 4.13e-01 | 100.0% | 82.6% |
| 4949364 | 1137.1.1.1 ↗ | a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain › TP_methylase | 0.52 | 38.0 | 3.96e-01 | 100.0% | 82.9% |
| 3978783 | 225.1.1.17 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c+His_kinase | 0.52 | 46.0 | 4.02e-01 | 100.0% | 73.9% |
| 3492820 | 873.1.1.5 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › HNOB | 0.52 | 46.0 | 3.84e-01 | 100.0% | 55.6% |
| 3398307 | 12.1.1.34 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Glyco_hydro38C2 | 0.51 | 45.0 | 4.39e-01 | 98.2% | 96.9% |
| 5022617 | 1137.1.1.0 ↗ | a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain | 0.51 | 36.0 | 3.83e-01 | 100.0% | 84.0% |
| 3270183 | 11.1.1.843 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7034 | 0.51 | 36.0 | 3.44e-01 | 86.0% | 62.2% |
| 3483881 | 4261.1.1.2 ↗ | a+b two layers › TrkA C-terminal domain-like › TrkA C-terminal domain-like › TrkA C-terminal domain-like › BK_channel_a | 0.51 | 35.0 | 3.51e-01 | 70.2% | 84.3% |
| 3614613 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.50 | 40.0 | 3.54e-01 | 86.0% | 61.8% |
| 3965735 | 274.1.1.5 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits › YadA_anchor | 0.50 | 28.0 | 3.20e-01 | 100.0% | 71.8% |
D2
high
residues 211-309
Domain cluster:
rep: NC_071004.1__YP_010675483.1__PQD13_gp54__00054__D91-174
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF23781.2 best | Phage_TAC_16 | 103.3 | 1.10e-29 | 87.9% | 72.6% |
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2yfaA02 | 1.20.1440.210 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.69 | 38.0 | 3.60e-01 | 99.0% | 44.8% |
| 2lhrA00 | 1.20.58.1270 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.66 | 34.0 | 3.79e-01 | 87.9% | 62.8% |
| 1lfkA00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.59 | 50.0 | 3.46e-01 | 96.0% | 79.5% |
| 3memA02 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.59 | 43.0 | 3.11e-01 | 77.8% | 68.1% |
| 5u56A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.59 | 33.0 | 3.17e-01 | 100.0% | 45.5% |
| 1gwiA00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.57 | 48.0 | 3.29e-01 | 96.0% | 67.9% |
| 6xkyA01 | 1.20.1330.10 | Mainly Alpha › Up-down Bundle › f41 fragment of flagellin, N-terminal domain › f41 fragment of flagellin, N-terminal domain | 0.57 | 45.0 | 3.69e-01 | 85.9% | 77.5% |
| 2id6A02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.56 | 44.0 | 3.87e-01 | 86.9% | 65.6% |
| 3lwjA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.55 | 43.0 | 3.51e-01 | 85.9% | 48.2% |
| 3nf4A01 | 1.10.540.10 | Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.54 | 33.0 | 3.09e-01 | 86.9% | 49.6% |
| 1mhyG02 | 1.20.1280.30 | Mainly Alpha › Up-down Bundle › Monooxygenase › Methane monooxygenase, gamma chain, domain 2 | 0.53 | 30.0 | 3.46e-01 | 83.8% | 75.3% |
| 2f5xA01 | 3.40.190.150 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Bordetella uptake gene, domain 1 | 0.51 | 39.0 | 3.22e-01 | 80.8% | 72.6% |
| 3piwA00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.51 | 37.0 | 3.24e-01 | 76.8% | 96.1% |
| 4adnA01 | 1.20.1280.250 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.51 | 38.0 | 4.14e-01 | 87.9% | 92.9% |
| 2e9xB02 | 1.20.58.1020 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.50 | 39.0 | 3.79e-01 | 99.0% | 75.2% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3755193 | 4146.1.1.7 ↗ | alpha bundles › YqgQ-like › YqgQ-like › YqgQ-like › DMAP_binding | 0.63 | 48.0 | 5.18e-01 | 86.9% | 100.0% |
| 4932592 | 4163.1.2.2 ↗ | alpha bundles › GINS helical bundle-like › GINS helical bundle-like › PSF2 C-terminal domain-like › PF27418 | 0.59 | 37.0 | 3.65e-01 | 88.9% | 59.0% |
| 3649780 | 109.4.1.68 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Coatomer_E | 0.57 | 33.0 | 3.23e-01 | 96.0% | 52.4% |
| 3398490 | 101.1.1.112 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › MADF_DNA_bdg | 0.55 | 36.0 | 4.16e-01 | 98.0% | 100.0% |
| 3446291 | 2006.1.3.11 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › TOP6A-Spo11_Toprim | 0.53 | 38.0 | 3.11e-01 | 73.7% | 100.0% |
| 4967017 | 4163.1.1.1 ↗ | alpha bundles › GINS helical bundle-like › GINS helical bundle-like › PSF1 N-terminal domain-like › Sld5 | 0.53 | 41.0 | 3.88e-01 | 99.0% | 68.3% |