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MT310896.1__QJD53473.1__SEA_LYNLEN_64__00064
Bact-VirMT310896.1__QJD53473.1__SEA_LYNLEN_64__00064
Identity
- Accession:
- MT310896 ↗
- Kingdom:
- phage
Quality
74.1
mean pLDDT
Taxonomy
TaxID: 2725651
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 12-66
Domain cluster:
representative
CATH (29)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6bogA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.70 | 54.0 | 5.57e-01 | 100.0% | 88.5% |
| 4c5eC02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.69 | 56.0 | 4.65e-01 | 100.0% | 51.0% |
| 3goxA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.67 | 53.0 | 5.47e-01 | 100.0% | 94.1% |
| 7k9cA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.67 | 54.0 | 4.67e-01 | 100.0% | 57.0% |
| 3e1sA04 | 2.30.30.940 | Mainly Beta › Roll › SH3 type barrels. › | 0.66 | 54.0 | 5.07e-01 | 100.0% | 73.9% |
| 4ytlA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.66 | 49.0 | 5.13e-01 | 100.0% | 90.0% |
| 3c4sA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.66 | 52.0 | 5.19e-01 | 100.0% | 86.0% |
| 2e70A00 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.64 | 48.0 | 4.43e-01 | 100.0% | 63.4% |
| 2ky9A01 | 2.30.30.1130 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 55.0 | 5.16e-01 | 100.0% | 80.6% |
| 2btwA00 | 3.90.70.30 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Phytochelatin synthase, N-terminal domain | 0.63 | 54.0 | 3.67e-01 | 100.0% | 32.4% |
| 1ts9A00 | 2.30.30.210 | Mainly Beta › Roll › SH3 type barrels. › Ribonuclease P/MRP, subunit p29 | 0.63 | 49.0 | 4.12e-01 | 100.0% | 49.0% |
| 2do3A01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 46.0 | 4.70e-01 | 100.0% | 88.2% |
| 3a2yA00 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.61 | 50.0 | 3.64e-01 | 100.0% | 38.9% |
| 2a2jA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.61 | 46.0 | 3.16e-01 | 83.6% | 68.0% |
| 1wv4B00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.61 | 46.0 | 3.35e-01 | 83.6% | 57.8% |
| 2e6zA00 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 45.0 | 4.51e-01 | 100.0% | 79.7% |
| 2vobB02 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.60 | 50.0 | 3.49e-01 | 100.0% | 33.6% |
| 3qvnA02 | 3.55.40.20 | Alpha Beta › 3-Layer(bab) Sandwich › minor pseudopilin epsh fold › Iron/manganese superoxide dismutase, C-terminal domain | 0.59 | 37.0 | 2.94e-01 | 100.0% | 29.1% |
| 1qxfA00 | 2.20.25.100 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › Ribosomal protein S27 | 0.58 | 44.0 | 4.34e-01 | 100.0% | 77.6% |
| 2w4yA00 | 2.40.160.220 | Mainly Beta › Beta Barrel › Porin › | 0.58 | 47.0 | 3.68e-01 | 90.9% | 86.9% |
| 1x6bA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.57 | 48.0 | 4.65e-01 | 100.0% | 85.9% |
| 7u32F02 | 2.30.30.10 | Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral | 0.56 | 45.0 | 4.64e-01 | 100.0% | 98.0% |
| 1oqkA00 | 2.30.30.210 | Mainly Beta › Roll › SH3 type barrels. › Ribonuclease P/MRP, subunit p29 | 0.56 | 44.0 | 4.00e-01 | 100.0% | 62.8% |
| 4iimA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.56 | 46.0 | 4.63e-01 | 100.0% | 93.0% |
| 6uzjA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.56 | 47.0 | 4.58e-01 | 100.0% | 88.9% |
| 2aklA01 | 2.20.25.10 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.54 | 35.0 | 3.75e-01 | 85.5% | 86.0% |
| 4fdyA02 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.53 | 41.0 | 3.27e-01 | 100.0% | 38.1% |
| 3h41A02 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.52 | 43.0 | 4.15e-01 | 100.0% | 88.2% |
| 3r5lA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.52 | 37.0 | 3.06e-01 | 81.8% | 91.4% |
ECOD (71)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5057234 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.73 | 54.0 | 4.99e-01 | 100.0% | 62.9% |
| 5064548 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.71 | 48.0 | 4.91e-01 | 100.0% | 73.6% |
| 1108894 | 4.1.1.122 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_17 | 0.68 | 53.0 | 5.41e-01 | 100.0% | 88.9% |
| 3358753 | 4.1.1.381 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5, KOW4_SPT5 | 0.67 | 50.0 | 3.58e-01 | 100.0% | 27.3% |
| 5000308 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.66 | 50.0 | 5.29e-01 | 100.0% | 93.9% |
| 5033242 | 4.7.1.1 ↗ | beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 | 0.66 | 52.0 | 4.56e-01 | 100.0% | 56.5% |
| 3721794 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 50.0 | 4.91e-01 | 100.0% | 76.7% |
| 5060804 | 4.7.1.1 ↗ | beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 | 0.66 | 51.0 | 4.41e-01 | 100.0% | 53.3% |
| 4372288 | 4.1.1.238 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 | 0.65 | 49.0 | 4.81e-01 | 100.0% | 75.0% |
| 3169607 | 4.1.1.238 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 | 0.65 | 49.0 | 4.45e-01 | 100.0% | 60.0% |
| 4177200 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.65 | 50.0 | 5.06e-01 | 100.0% | 85.5% |
| 4629022 | 4.1.1.238 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 | 0.65 | 49.0 | 4.57e-01 | 100.0% | 65.7% |
| 3627869 | 4.1.1.347 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW7_SPT5, KOW6_SPT5 | 0.65 | 53.0 | 3.86e-01 | 100.0% | 32.9% |
| 4943876 | 4.7.1.0 ↗ | beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 | 0.64 | 50.0 | 4.25e-01 | 100.0% | 50.5% |
| 3302817 | 4.1.1.362 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW6_SPT51-2, KOW7_SPT5 | 0.64 | 48.0 | 3.86e-01 | 100.0% | 41.3% |
| 4157433 | 4.7.1.1 ↗ | beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 | 0.64 | 51.0 | 4.71e-01 | 100.0% | 67.6% |
| 4253108 | 4.7.1.1 ↗ | beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 | 0.64 | 50.0 | 4.31e-01 | 100.0% | 54.5% |
| 4660107 | 4.1.1.238 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 | 0.64 | 47.0 | 4.62e-01 | 100.0% | 75.0% |
| 4024915 | 4.1.1.237 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW4_SPT5 | 0.64 | 50.0 | 4.79e-01 | 100.0% | 73.8% |
| 5038850 | 4.7.1.1 ↗ | beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 | 0.64 | 50.0 | 4.29e-01 | 100.0% | 53.3% |
| 3938291 | 4.7.1.1 ↗ | beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 | 0.63 | 51.0 | 3.85e-01 | 100.0% | 36.3% |
| 4098445 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.63 | 47.0 | 4.64e-01 | 100.0% | 75.0% |
| 4947175 | 4.7.1.0 ↗ | beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 | 0.63 | 50.0 | 4.26e-01 | 100.0% | 53.3% |
| 3625177 | 4.7.1.1 ↗ | beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 | 0.63 | 51.0 | 3.83e-01 | 100.0% | 36.3% |
| 4251253 | 4.7.1.1 ↗ | beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 | 0.63 | 51.0 | 4.13e-01 | 100.0% | 46.7% |
| 4172306 | 4.7.1.1 ↗ | beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 | 0.63 | 50.0 | 4.24e-01 | 100.0% | 51.6% |
| 3696189 | 4.7.1.1 ↗ | beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 | 0.63 | 51.0 | 3.58e-01 | 100.0% | 28.3% |
| 4101502 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.63 | 49.0 | 4.94e-01 | 100.0% | 87.0% |
| 3193814 | 4.7.1.1 ↗ | beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 | 0.63 | 50.0 | 3.95e-01 | 100.0% | 40.8% |
| 4357819 | 4.1.1.238 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 | 0.63 | 46.0 | 4.35e-01 | 100.0% | 64.3% |
| 4025002 | 4.7.1.1 ↗ | beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 | 0.63 | 50.0 | 3.84e-01 | 100.0% | 37.7% |
| 4668815 | 4.7.1.1 ↗ | beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 | 0.63 | 50.0 | 4.23e-01 | 100.0% | 51.6% |
| 3486327 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 47.0 | 4.58e-01 | 100.0% | 75.0% |
| 3651964 | 4.1.1.249 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW2_Spt5 | 0.63 | 48.0 | 3.79e-01 | 100.0% | 39.2% |
| 3518287 | 4.1.1.347 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW7_SPT5, KOW6_SPT5 | 0.63 | 55.0 | 4.34e-01 | 100.0% | 49.6% |
| 5005903 | 4.7.1.1 ↗ | beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 | 0.62 | 49.0 | 4.07e-01 | 100.0% | 48.0% |
| 3554026 | 4.1.1.233 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_VII_N | 0.62 | 51.0 | 4.98e-01 | 100.0% | 85.0% |
| 3390230 | 4.7.1.1 ↗ | beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 | 0.62 | 50.0 | 3.70e-01 | 100.0% | 33.8% |
| 5037772 | 4.7.1.1 ↗ | beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 | 0.62 | 50.0 | 3.99e-01 | 100.0% | 43.4% |
| 4977702 | 4.7.1.1 ↗ | beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 | 0.62 | 49.0 | 4.28e-01 | 100.0% | 56.5% |
| 3660923 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 46.0 | 4.32e-01 | 100.0% | 64.3% |
| 3931905 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 49.0 | 3.91e-01 | 100.0% | 42.6% |
| 5065841 | 4.7.1.0 ↗ | beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 | 0.62 | 49.0 | 4.29e-01 | 100.0% | 57.1% |
| 3741907 | 4.7.1.1 ↗ | beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 | 0.62 | 49.0 | 3.70e-01 | 100.0% | 35.0% |
| 5068429 | 4.7.1.1 ↗ | beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 | 0.62 | 49.0 | 4.03e-01 | 100.0% | 47.1% |
| 4030603 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 52.0 | 4.94e-01 | 100.0% | 79.4% |
| 3441976 | 4.7.1.1 ↗ | beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 | 0.61 | 50.0 | 3.79e-01 | 100.0% | 37.0% |
| 3366578 | 4.1.1.325 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW, KOW2_Spt5 | 0.61 | 46.0 | 3.70e-01 | 100.0% | 39.2% |
| 3821919 | 4.1.1.238 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 | 0.61 | 43.0 | 4.28e-01 | 100.0% | 71.7% |
| 4098870 | 4.7.1.1 ↗ | beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 | 0.61 | 49.0 | 4.17e-01 | 100.0% | 52.6% |
| 3996679 | 4.1.1.251 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW7_SPT5 | 0.61 | 45.0 | 4.51e-01 | 100.0% | 80.0% |
| 3592525 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 52.0 | 4.23e-01 | 100.0% | 62.7% |
| 3169706 | 4.7.1.1 ↗ | beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 | 0.61 | 51.0 | 3.75e-01 | 100.0% | 34.7% |
| 3259044 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.60 | 50.0 | 5.05e-01 | 100.0% | 96.4% |
| 5046193 | 4.7.1.1 ↗ | beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 | 0.60 | 47.0 | 4.05e-01 | 100.0% | 53.3% |
| 4121981 | 4.1.1.325 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW, KOW2_Spt5 | 0.60 | 47.0 | 3.65e-01 | 100.0% | 38.4% |
| 3264808 | 4.1.1.237 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW4_SPT5 | 0.60 | 46.0 | 4.32e-01 | 100.0% | 68.6% |
| 4928381 | 4.7.1.1 ↗ | beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 | 0.60 | 47.0 | 4.30e-01 | 98.2% | 65.8% |
| 3302829 | 4.1.1.237 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW4_SPT5 | 0.60 | 47.0 | 4.47e-01 | 100.0% | 73.8% |
| 3296865 | 4.1.1.237 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW4_SPT5 | 0.60 | 47.0 | 3.81e-01 | 100.0% | 45.7% |
| 3703934 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 45.0 | 4.44e-01 | 100.0% | 78.3% |
| 4932493 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 45.0 | 4.37e-01 | 100.0% | 73.8% |
| 5022234 | 4.7.1.0 ↗ | beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 | 0.58 | 46.0 | 4.18e-01 | 100.0% | 62.8% |
| 4491893 | 4.1.1.7 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW,ribosomal_L24 | 0.58 | 51.0 | 4.17e-01 | 100.0% | 61.2% |
| 135591 | 265.1.1.4 ↗ | a+b two layers › RNA bacteriophage capsid protein › RNA bacteriophage capsid protein › RNA bacteriophage capsid protein › PhiCb5_coat | 0.58 | 47.0 | 3.68e-01 | 90.9% | 86.9% |
| 3784601 | 376.1.6.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › IBR domain › IBR | 0.58 | 39.0 | 4.21e-01 | 87.3% | 88.9% |
| 3713613 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 47.0 | 4.48e-01 | 100.0% | 87.7% |
| 3235789 | 376.1.6.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › IBR domain › IBR | 0.54 | 41.0 | 4.17e-01 | 89.1% | 90.9% |
| 3963572 | 2003.1.5.32 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Cons_hypoth95 | 0.54 | 40.0 | 2.87e-01 | 81.8% | 83.4% |
| 4018431 | 376.1.4.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Ariadne-1 protein homolog › IBR | 0.53 | 36.0 | 3.66e-01 | 94.5% | 74.5% |
| 4011393 | 6.1.1.0 ↗ | beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil | 0.51 | 43.0 | 3.16e-01 | 100.0% | 88.7% |
D2
medium
residues 79-126