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MT310898.1__QJD53605.1__SEA_KELA_34__00034
Bact-VirMT310898.1__QJD53605.1__SEA_KELA_34__00034
Identity
- Accession:
- MT310898 ↗
- Kingdom:
- phage
Quality
73.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-28
Domain cluster:
representative
CATH (27)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2eayB02 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.70 | 51.0 | 4.56e-01 | 92.9% | 73.5% |
| 2p2eA00 | 2.60.300.12 | Mainly Beta › Sandwich › Hypothetical Protein Aq_1857; Chain: A; › HesB-like domain | 0.63 | 47.0 | 3.29e-01 | 92.9% | 23.5% |
| 2xzhA00 | 2.130.10.110 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Clathrin heavy-chain terminal domain | 0.62 | 44.0 | 2.59e-01 | 100.0% | 85.2% |
| 1ywyA00 | 3.40.1170.40 | Alpha Beta › 3-Layer(aba) Sandwich › MutS, DNA mismatch repair protein, domain I › Protein of unknown function DUF3203 | 0.61 | 42.0 | 3.42e-01 | 92.9% | 32.4% |
| 3oymA01 | 1.10.340.70 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › | 0.61 | 44.0 | 3.29e-01 | 92.9% | 25.8% |
| 1hxdA03 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 43.0 | 4.10e-01 | 89.3% | 83.7% |
| 2gtiA01 | 3.30.160.820 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Nsp15 N-terminal domain-like | 0.61 | 44.0 | 3.58e-01 | 92.9% | 37.5% |
| 3dhuA02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.60 | 42.0 | 3.46e-01 | 100.0% | 88.0% |
| 2ewvA01 | 3.30.450.90 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.60 | 42.0 | 3.09e-01 | 92.9% | 24.5% |
| 2zwrB00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.59 | 45.0 | 2.78e-01 | 96.4% | 35.7% |
| 3bfmA02 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 41.0 | 3.91e-01 | 92.9% | 79.1% |
| 3qktD01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.58 | 40.0 | 2.40e-01 | 100.0% | 13.8% |
| 3hj6A02 | 3.40.1620.20 | Alpha Beta › 3-Layer(aba) Sandwich › YefM-like fold › | 0.57 | 38.0 | 3.48e-01 | 100.0% | 46.6% |
| 5yvxA00 | 3.30.40.100 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › | 0.57 | 41.0 | 3.51e-01 | 96.4% | 73.3% |
| 2mnjB00 | 2.60.40.4160 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.56 | 39.0 | 3.01e-01 | 100.0% | 28.4% |
| 1uoyA01 | 2.30.130.50 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › | 0.56 | 39.0 | 3.50e-01 | 96.4% | 49.1% |
| 2wfwA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.56 | 42.0 | 3.56e-01 | 92.9% | 96.6% |
| 1f5aA02 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.53 | 38.0 | 2.65e-01 | 100.0% | 41.0% |
| 1sg5A01 | 2.30.30.400 | Mainly Beta › Roll › SH3 type barrels. › Rof-like | 0.53 | 36.0 | 3.04e-01 | 96.4% | 57.1% |
| 2iz4A02 | 2.20.25.590 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.52 | 37.0 | 3.54e-01 | 82.1% | 57.1% |
| 1ii7A01 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.51 | 35.0 | 2.22e-01 | 96.4% | 98.8% |
| 3g12B00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.51 | 38.0 | 2.78e-01 | 96.4% | 26.5% |
| 5sviB00 | 3.30.40.100 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › | 0.51 | 37.0 | 3.39e-01 | 100.0% | 81.1% |
| 3k8rA01 | 3.30.2020.40 | Alpha Beta › 2-Layer Sandwich › NE0471 N-terminal domain-like › Uncharacterised protein PF10387, DUF2442 | 0.51 | 33.0 | 2.98e-01 | 96.4% | 44.1% |
| 2fkiA00 | 3.90.1150.30 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › | 0.51 | 35.0 | 2.62e-01 | 100.0% | 50.0% |
| 7d27A02 | 3.40.1190.10 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain | 0.50 | 36.0 | 2.26e-01 | 100.0% | 29.1% |
| 4fssB00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.50 | 36.0 | 3.09e-01 | 78.6% | 36.1% |
ECOD (44)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4965299 | 375.1.1.85 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Auto_anti-p27 | 0.65 | 46.0 | 4.62e-01 | 92.9% | 90.0% |
| 3455391 | 2004.1.1.51 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Sulfotransfer_1 | 0.64 | 44.0 | 2.89e-01 | 85.7% | 15.0% |
| 3928114 | 2484.1.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 | 0.63 | 46.0 | 2.63e-01 | 100.0% | 21.8% |
| 3791383 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.63 | 42.0 | 3.21e-01 | 85.7% | 26.3% |
| 3528795 | 3761.1.1.0 ↗ | beta duplicates or obligate multimers › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related | 0.62 | 45.0 | 4.12e-01 | 82.1% | 51.1% |
| 4941675 | 2004.1.1.198 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 | 0.60 | 41.0 | 2.31e-01 | 96.4% | 6.2% |
| 4040325 | 375.4.1.2 ↗ | few secondary structure elements › Rubredoxin-like › Nucleolar RNA-binding protein Nop10-like › Nucleolar RNA-binding protein Nop10-like › DUF2614 | 0.59 | 44.0 | 4.17e-01 | 96.4% | 70.0% |
| 3545467 | 391.1.2.10 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related › VWC2L_1st | 0.59 | 44.0 | 4.24e-01 | 92.9% | 65.0% |
| 3306545 | 331.2.1.8 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › CPSF73-100_C | 0.59 | 41.0 | 3.28e-01 | 96.4% | 31.8% |
| 4599267 | 2003.1.3.4 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › Lys_Orn_oxgnase | 0.59 | 40.0 | 2.52e-01 | 92.9% | 11.6% |
| 2077327 | 101.1.2.70 ↗ | alpha arrays › HTH › HTH › winged helix domain › PqqD | 0.59 | 39.0 | 3.07e-01 | 92.9% | 26.6% |
| 3588526 | 80.1.1.1 ↗ | beta complex topology › HesB-like domain › HesB-like domain › HesB-like domain › Fe-S_biosyn | 0.57 | 43.0 | 3.03e-01 | 92.9% | 22.9% |
| 3901052 | 391.1.2.10 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related › VWC2L_1st | 0.57 | 44.0 | 3.70e-01 | 96.4% | 45.0% |
| 3739977 | 64.1.1.1 ↗ | beta meanders › WW domain-like › WW domain › WW domain › WW | 0.57 | 39.0 | 4.01e-01 | 85.7% | 83.3% |
| 3576759 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.57 | 36.0 | 3.25e-01 | 100.0% | 47.1% |
| 4024943 | 4351.1.1.0 ↗ | alpha arrays › ATP12-like › ATP12-like › ATP12-like | 0.57 | 41.0 | 2.61e-01 | 96.4% | 30.9% |
| 1673893 | 319.1.1.6 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › Pih1_fungal_CS | 0.56 | 39.0 | 3.01e-01 | 100.0% | 28.4% |
| 3947154 | 101.1.2.70 ↗ | alpha arrays › HTH › HTH › winged helix domain › PqqD | 0.56 | 37.0 | 2.98e-01 | 92.9% | 27.8% |
| 3022623 | 101.1.11.3 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › TCP | 0.56 | 37.0 | 3.04e-01 | 92.9% | 36.1% |
| 3991137 | 5.1.4.8 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH | 0.56 | 38.0 | 2.26e-01 | 96.4% | 7.9% |
| 3816298 | 1.1.1.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › RVP_2 | 0.55 | 40.0 | 3.18e-01 | 96.4% | 32.1% |
| 3590122 | 4999.1.1.1 ↗ | beta barrels › YopX, C-terminal domain-like › YopX, C-terminal domain-like › YopX, C-terminal domain-like › YopX | 0.55 | 39.0 | 3.36e-01 | 96.4% | 47.7% |
| 3629581 | 7512.1.1.6 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_20 | 0.55 | 38.0 | 2.37e-01 | 100.0% | 9.8% |
| 4943403 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.55 | 34.0 | 2.28e-01 | 100.0% | 27.0% |
| 3224950 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.55 | 39.0 | 2.94e-01 | 96.4% | 25.7% |
| 4449615 | 101.1.2.70 ↗ | alpha arrays › HTH › HTH › winged helix domain › PqqD | 0.55 | 36.0 | 2.90e-01 | 89.3% | 27.8% |
| 4262159 | 2004.1.1.308 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_21 | 0.55 | 40.0 | 2.35e-01 | 96.4% | 9.0% |
| 5012813 | 2004.1.1.293 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_15 | 0.55 | 38.0 | 2.32e-01 | 96.4% | 8.9% |
| 3417878 | 376.1.6.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › IBR domain › IBR | 0.54 | 39.0 | 3.34e-01 | 89.3% | 38.3% |
| 3372525 | 2004.1.1.250 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin,Microtub_bd | 0.54 | 41.0 | 2.37e-01 | 96.4% | 85.2% |
| 3958471 | 4294.1.1.0 ↗ | few secondary structure elements › Trm112p-like › Trm112p-like › Trm112p-like | 0.54 | 36.0 | 3.61e-01 | 92.9% | 65.0% |
| 3357892 | 206.1.1.20 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr | 0.54 | 36.0 | 2.39e-01 | 100.0% | 35.4% |
| 3616581 | 7512.1.1.6 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_20 | 0.54 | 37.0 | 2.26e-01 | 100.0% | 8.9% |
| 4082314 | 386.1.1.69 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › AKAP95 | 0.54 | 38.0 | 3.22e-01 | 96.4% | 44.6% |
| 4945288 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 37.0 | 3.58e-01 | 92.9% | 58.1% |
| 5036301 | 375.1.1.37 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TF_Zn_Ribbon | 0.53 | 37.0 | 3.64e-01 | 89.3% | 55.0% |
| 3958829 | 323.1.1.0 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases | 0.53 | 38.0 | 2.34e-01 | 89.3% | 61.4% |
| 4679570 | 386.1.1.69 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › AKAP95 | 0.53 | 37.0 | 2.54e-01 | 100.0% | 18.8% |
| 3953652 | 4317.1.1.0 ↗ | a+b duplicates or obligate multimers › YdfO-like › YdfO-like › YdfO-like | 0.52 | 36.0 | 3.06e-01 | 82.1% | 35.4% |
| 3655225 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.52 | 38.0 | 3.43e-01 | 96.4% | 50.0% |
| 4379527 | 101.1.2.70 ↗ | alpha arrays › HTH › HTH › winged helix domain › PqqD | 0.52 | 36.0 | 2.86e-01 | 89.3% | 30.6% |
| 4040812 | 101.1.2.70 ↗ | alpha arrays › HTH › HTH › winged helix domain › PqqD | 0.52 | 33.0 | 2.75e-01 | 92.9% | 28.1% |
| 4996608 | 2007.9.1.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Toll/Interleukin receptor TIR domain › Toll/Interleukin receptor TIR domain › TIR_2 | 0.51 | 34.0 | 2.22e-01 | 89.3% | 12.0% |
| 3900575 | 386.1.1.69 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › AKAP95 | 0.50 | 35.0 | 3.20e-01 | 100.0% | 54.5% |