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MT311968.1__QJD49539.1__phi29961_0019__00019

Bact-Vir

MT311968.1__QJD49539.1__phi29961_0019__00019

Identity

Accession:
MT311968 ↗
Kingdom:
phage

Quality

88.9 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Streptococcus_phage_phi29961

TaxID: 2729190

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-123_303-354
PDB
Domain cluster: representative
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1d4tA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.60 25.0 3.20e-01 79.5% 63.5%
1i3zA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.58 25.0 3.16e-01 79.5% 64.1%
4fx9A03 3.30.390.30 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain 0.53 30.0 3.56e-01 87.7% 82.3%
3cgbA03 3.30.390.30 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain 0.51 28.0 3.42e-01 84.2% 81.8%
2gqrA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.51 25.0 3.17e-01 98.2% 76.0%
3kreA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.50 25.0 3.17e-01 98.2% 79.4%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3624597 214.1.1.9 ↗ a+b two layers › SH2 › SH2 › SH2 › DUF7063 0.59 22.0 2.94e-01 77.8% 62.0%
4602126 214.1.1.1 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2 0.58 25.0 3.07e-01 79.5% 60.0%
3220873 214.1.1.9 ↗ a+b two layers › SH2 › SH2 › SH2 › DUF7063 0.57 22.0 2.94e-01 78.4% 63.0%
D2 high residues 159-298
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3hl1A02 6.10.140.1530 Special › Helix non-globular › Helix Hairpins › 0.51 23.0 3.09e-01 92.9% 84.6%
4d4iA01 3.40.50.12780 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain 0.51 41.0 3.02e-01 87.9% 94.4%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3598300 102.1.1.0 ↗ alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.55 27.0 3.74e-01 100.0% 94.3%
3310571 206.1.1.20 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr 0.53 44.0 3.92e-01 91.4% 79.5%
3254127 633.6.1.8 ↗ alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like › ACOX_C_alpha1 0.50 37.0 3.40e-01 75.7% 73.3%