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MT316461.1__QJD54048.1__SEA_GALACTICA_101__00100
Bact-VirMT316461.1__QJD54048.1__SEA_GALACTICA_101__00100
Identity
- Accession:
- MT316461 ↗
- Kingdom:
- phage
Quality
70.1
mean pLDDT
Taxonomy
TaxID: 2725755
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-117
Domain cluster:
representative
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1vwxS01 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.68 | 43.0 | 5.25e-01 | 81.1% | 98.6% |
| 1hq6B00 | 3.50.20.10 | Alpha Beta › 3-Layer(bba) Sandwich › Pyruvoyl-Dependent Histidine Decarboxylase; Chain B › Pyruvoyl-Dependent Histidine Decarboxylase, subunit B | 0.62 | 46.0 | 3.70e-01 | 78.4% | 46.9% |
| 2o8rB02 | 3.30.1840.10 | Alpha Beta › 2-Layer Sandwich › polyphosphate kinase like › Polyphosphate kinase middle domain | 0.59 | 47.0 | 4.30e-01 | 88.3% | 78.7% |
| 4dohB02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 33.0 | 3.64e-01 | 82.0% | 72.7% |
| 5cqgA04 | 3.30.70.2630 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 43.0 | 4.42e-01 | 83.8% | 96.2% |
| 6brbD00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 32.0 | 3.53e-01 | 81.1% | 71.3% |
| 2oo3A00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.54 | 42.0 | 3.18e-01 | 82.0% | 95.9% |
| 4cyuA00 | 3.30.70.560 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK | 0.53 | 38.0 | 3.49e-01 | 75.7% | 94.2% |
| 2nytD00 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.52 | 42.0 | 3.62e-01 | 86.5% | 91.6% |
| 2aqjA00 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.52 | 42.0 | 2.77e-01 | 90.1% | 53.6% |
| 4nn5C02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 32.0 | 3.37e-01 | 82.9% | 69.7% |
| 2x12A01 | 2.60.40.2010 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.50 | 36.0 | 3.05e-01 | 74.8% | 58.9% |
ECOD (30)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4332626 | 3532.1.1.0 ↗ | alpha arrays › RNA-binding domain of telomerase › RNA-binding domain of telomerase › RNA-binding domain of telomerase | 0.67 | 47.0 | 2.94e-01 | 73.0% | 25.0% |
| 3874464 | 304.48.1.1 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_1 | 0.66 | 47.0 | 3.27e-01 | 73.9% | 42.3% |
| 3280008 | 3115.1.1.2 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › DUF4288 | 0.65 | 45.0 | 4.89e-01 | 70.3% | 98.9% |
| 3227513 | 3115.1.1.3 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › NRF | 0.65 | 51.0 | 5.22e-01 | 82.0% | 97.1% |
| 3508713 | 382.1.1.25 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › YjeJ | 0.64 | 54.0 | 5.26e-01 | 90.1% | 96.7% |
| 3508212 | 3115.1.1.6 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › DUF4494 | 0.64 | 40.0 | 4.73e-01 | 80.2% | 98.6% |
| 4443054 | 3115.1.1.9 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › YjeJ | 0.63 | 52.0 | 5.11e-01 | 89.2% | 95.8% |
| 3996758 | 244.1.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C | 0.63 | 47.0 | 4.44e-01 | 79.3% | 97.0% |
| 3790957 | 3562.1.1.21 ↗ | alpha bundles › Calcium release-activated calcium channel protein 1 › Calcium release-activated calcium channel protein 1 › Calcium release-activated calcium channel protein 1 › NRF | 0.63 | 50.0 | 4.32e-01 | 87.4% | 95.6% |
| 3413240 | 3115.1.1.3 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › NRF | 0.62 | 50.0 | 4.42e-01 | 86.5% | 95.6% |
| 4199730 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.62 | 48.0 | 5.00e-01 | 83.8% | 96.2% |
| 4065910 | 4114.1.1.1 ↗ | a+b two layers › PHP14-like › PHP14-like › PHP14-like › PP_kinase | 0.62 | 52.0 | 4.19e-01 | 91.0% | 73.8% |
| 3965010 | 3115.4.1.1 ↗ | a+b two layers › GP2-like › Uncharacterized conserved protein Il1583 › Uncharacterized conserved protein Il1583 › DUF1543 | 0.61 | 42.0 | 4.58e-01 | 70.3% | 90.0% |
| 4954241 | 4114.1.1.1 ↗ | a+b two layers › PHP14-like › PHP14-like › PHP14-like › PP_kinase | 0.60 | 50.0 | 4.20e-01 | 91.9% | 79.5% |
| 4305590 | 4114.1.1.1 ↗ | a+b two layers › PHP14-like › PHP14-like › PHP14-like › PP_kinase | 0.59 | 50.0 | 4.15e-01 | 93.7% | 74.1% |
| 4060103 | 4114.1.1.1 ↗ | a+b two layers › PHP14-like › PHP14-like › PHP14-like › PP_kinase | 0.59 | 48.0 | 3.95e-01 | 91.0% | 77.2% |
| 3405278 | 382.1.1.3 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › Activin_recp | 0.59 | 43.0 | 4.49e-01 | 80.2% | 84.0% |
| 3907467 | 382.1.1.1 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › UPAR_LY6 | 0.58 | 40.0 | 4.53e-01 | 79.3% | 94.1% |
| 3729534 | 821.1.1.0 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease | 0.56 | 39.0 | 3.62e-01 | 71.2% | 92.4% |
| 3616146 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.55 | 36.0 | 3.69e-01 | 86.5% | 69.5% |
| 3492718 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.55 | 41.0 | 4.28e-01 | 79.3% | 94.0% |
| 9418 | 2003.1.5.37 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › RsmJ | 0.54 | 42.0 | 3.18e-01 | 82.0% | 95.9% |
| 3413442 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.54 | 38.0 | 4.21e-01 | 79.3% | 95.3% |
| 3797444 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 35.0 | 3.66e-01 | 86.5% | 70.5% |
| 3968511 | 304.45.1.1 ↗ | a+b two layers › Alpha-beta plaits › 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK › 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK › HPPK | 0.52 | 38.0 | 3.38e-01 | 79.3% | 84.6% |
| 5069244 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 39.0 | 3.85e-01 | 90.1% | 74.8% |
| 4013188 | 304.6.1.3 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › BBE | 0.52 | 44.0 | 3.47e-01 | 96.4% | 87.8% |
| 3294902 | 304.6.1.3 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › BBE | 0.50 | 43.0 | 3.22e-01 | 96.4% | 80.7% |
| 3915206 | 10.32.1.203 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Seipin | 0.50 | 37.0 | 3.17e-01 | 76.6% | 73.1% |
| 5050593 | 304.6.1.1 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › FAD-oxidase_C | 0.50 | 34.0 | 2.80e-01 | 71.2% | 43.5% |