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MT325768.1__QJI52308.1__X__00011

Bact-Vir

MT325768.1__QJI52308.1__X__00011

Identity

Accession:
MT325768 ↗
Kingdom:
phage

Quality

95.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Psychrobacillus_phage_Perkons

TaxID: 2729574

Cluster

View cluster (6 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-96
PDB
Domain cluster: rep: MT375528.1__QLF88439.1__Jormungand_gp44__00044__D53-135
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF07275.17 best ArdA 78.0 1.70e-21 96.7% 52.9%
D2 high residues 114-175
PDB
Domain cluster: representative
CATH (23)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2w82A03 1.10.10.1190 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Antirestriction protein ArdA, domain 3 0.94 85.0 8.56e-01 100.0% 96.8%
2bg1A01 3.90.1310.40 Alpha Beta › Alpha-Beta Complex › Penicillin-binding protein 2a (Domain 2) › 0.69 55.0 5.15e-01 88.7% 74.0%
2b30A02 3.30.1240.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › 0.67 41.0 3.43e-01 100.0% 35.8%
5a48B00 3.30.420.610 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › LOTUS domain-like 0.60 44.0 3.96e-01 100.0% 54.2%
2co9A00 1.10.30.10 Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain 0.56 42.0 3.72e-01 87.1% 56.9%
1i27A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 42.0 4.09e-01 100.0% 74.0%
2zj2A03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 42.0 3.91e-01 100.0% 63.1%
1qrvA00 1.10.30.10 Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain 0.55 41.0 3.96e-01 83.9% 78.1%
3l7wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 42.0 3.64e-01 100.0% 52.4%
4c9yA00 1.10.10.1890 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Ska1 microtubule binding domain-like 0.54 39.0 3.18e-01 100.0% 39.0%
2wz1B00 3.30.70.1230 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain 0.54 39.0 2.77e-01 77.4% 93.9%
3m8eA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 37.0 3.30e-01 100.0% 45.5%
2o0yB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 37.0 3.75e-01 98.4% 72.3%
2lh9A00 3.30.420.610 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › LOTUS domain-like 0.53 40.0 3.82e-01 100.0% 69.2%
3mq0A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 37.0 3.49e-01 100.0% 59.7%
2l02A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 36.0 3.41e-01 100.0% 56.1%
3s93A00 3.30.420.610 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › LOTUS domain-like 0.52 41.0 3.85e-01 100.0% 70.0%
1mkmB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 37.0 3.49e-01 100.0% 61.8%
1hw1A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 35.0 3.42e-01 100.0% 61.3%
6jrpA01 1.10.30.10 Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain 0.51 38.0 3.89e-01 83.9% 96.7%
4aimA03 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.51 34.0 3.33e-01 100.0% 60.6%
3zevB00 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.51 38.0 2.53e-01 83.9% 77.6%
2e9yB00 3.40.1160.10 Alpha Beta › 3-Layer(aba) Sandwich › Carbamate kinase › Acetylglutamate kinase-like 0.51 38.0 2.47e-01 80.6% 81.1%
ECOD (41)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
184960 3489.1.1.1 ↗ a+b complex topology › ArdA › ArdA › ArdA › ArdA 0.94 85.0 6.04e-01 100.0% 36.8%
3397502 4012.4.1.0 ↗ a+b two layers › SSHS domain › DPAGT1 insertion domain › DPAGT1 insertion domain 0.64 39.0 4.67e-01 100.0% 97.5%
4024318 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.60 48.0 4.43e-01 100.0% 68.2%
3824278 101.1.2.132 ↗ alpha arrays › HTH › HTH › winged helix domain › DUF3591 0.59 38.0 3.52e-01 100.0% 48.2%
4991630 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.58 47.0 4.76e-01 100.0% 96.7%
3416159 2003.1.5.67 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_12 0.58 47.0 3.18e-01 100.0% 21.1%
3292274 190.1.1.1 ↗ alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box 0.57 43.0 4.12e-01 85.5% 74.7%
3935653 101.1.2.83 ↗ alpha arrays › HTH › HTH › winged helix domain › SKA1 0.57 41.0 3.36e-01 100.0% 40.0%
4078439 152.1.2.1 ↗ alpha arrays › RPB6/omega subunit-like › RPB6/omega subunit-like › RNA polymerase omega subunit › RNA_pol_Rpb6 0.56 40.0 4.04e-01 88.7% 75.4%
3877696 101.1.2.164 ↗ alpha arrays › HTH › HTH › winged helix domain › TFA2_Winged_2 0.56 35.0 3.14e-01 100.0% 39.0%
5079100 101.1.2.162 ↗ alpha arrays › HTH › HTH › winged helix domain › DprA_WH 0.56 38.0 4.07e-01 100.0% 97.8%
4013928 2003.1.5.8 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Ubie_methyltran 0.56 47.0 3.08e-01 96.8% 88.1%
3805600 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.55 45.0 3.63e-01 100.0% 43.4%
4933807 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.55 44.0 4.06e-01 100.0% 68.2%
3242475 101.1.2.137 ↗ alpha arrays › HTH › HTH › winged helix domain › OST-HTH 0.54 42.0 3.85e-01 100.0% 62.2%
3996957 101.1.2.506 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_NWD1 0.54 45.0 3.88e-01 100.0% 58.1%
4339648 101.1.2.852 ↗ alpha arrays › HTH › HTH › winged helix domain › PF27213 0.54 41.0 3.71e-01 100.0% 58.9%
3433039 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.54 43.0 3.89e-01 100.0% 71.0%
3228605 101.1.2.309 ↗ alpha arrays › HTH › HTH › winged helix domain › GPAT_C 0.53 44.0 3.30e-01 100.0% 35.1%
4928166 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.53 37.0 3.86e-01 100.0% 83.6%
3626211 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.53 45.0 4.04e-01 100.0% 83.2%
5046509 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.53 37.0 3.53e-01 100.0% 61.3%
3236724 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.52 42.0 3.73e-01 100.0% 60.0%
4365970 101.1.2.309 ↗ alpha arrays › HTH › HTH › winged helix domain › GPAT_C 0.52 43.0 3.72e-01 100.0% 59.1%
4948782 101.1.2.136 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.52 38.0 3.69e-01 100.0% 68.0%
3929490 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.52 39.0 3.63e-01 96.8% 62.5%
5079127 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.52 38.0 3.60e-01 98.4% 65.3%
3805332 2004.1.1.164 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Roc 0.52 40.0 2.88e-01 90.3% 85.0%
4586962 101.1.2.309 ↗ alpha arrays › HTH › HTH › winged helix domain › GPAT_C 0.51 42.0 3.57e-01 100.0% 54.2%
4195219 101.1.2.309 ↗ alpha arrays › HTH › HTH › winged helix domain › GPAT_C 0.51 42.0 3.76e-01 100.0% 64.0%
3974773 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.51 42.0 3.70e-01 100.0% 61.9%
3741476 101.1.2.527 ↗ alpha arrays › HTH › HTH › winged helix domain › WH_RGF3 0.51 41.0 3.71e-01 100.0% 71.0%
3376263 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.51 42.0 3.94e-01 100.0% 77.6%
3998761 101.1.15.1 ↗ alpha arrays › HTH › HTH › HAT1, C-terminal domain › MOZ_SAS 0.51 38.0 3.60e-01 85.5% 93.8%
3413705 101.1.2.137 ↗ alpha arrays › HTH › HTH › winged helix domain › OST-HTH 0.51 38.0 3.51e-01 100.0% 61.1%
3203402 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.51 42.0 3.18e-01 100.0% 37.7%
3819120 101.1.2.120 ↗ alpha arrays › HTH › HTH › winged helix domain › DDRGK 0.50 36.0 3.11e-01 100.0% 45.7%
4162396 2007.2.1.1 ↗ a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Flavoproteins › Flavodoxin_1 0.50 39.0 2.85e-01 88.7% 75.9%
3291053 101.1.2.78 ↗ alpha arrays › HTH › HTH › winged helix domain › AlkZ-like 0.50 35.0 3.51e-01 100.0% 73.8%
3818462 101.1.2.137 ↗ alpha arrays › HTH › HTH › winged helix domain › OST-HTH 0.50 37.0 3.40e-01 100.0% 58.9%
3786419 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.50 41.0 3.75e-01 100.0% 83.3%