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MT325768.1__QJI52342.1__X__00045
Bact-VirMT325768.1__QJI52342.1__X__00045
Identity
- Accession:
- MT325768 ↗
- Kingdom:
- phage
Quality
69.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 23-88
Domain cluster:
rep: MT104122.1__QIG62611.1__X__00097__D2-64
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2wl8C00 | 1.20.120.900 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Pex19, mPTS binding domain | 0.66 | 56.0 | 4.77e-01 | 93.9% | 76.1% |
| 4ol8B03 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.64 | 49.0 | 4.56e-01 | 98.5% | 64.4% |
| 4nqwA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 45.0 | 4.55e-01 | 80.3% | 98.4% |
| 1jkwA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.59 | 48.0 | 3.67e-01 | 95.5% | 47.2% |
| 3pvuA02 | 1.10.167.10 | Mainly Alpha › Orthogonal Bundle › Regulator of G-protein Signalling 4; domain 2 › Regulator of G-protein Signalling 4, domain 2 | 0.58 | 44.0 | 4.19e-01 | 100.0% | 70.0% |
| 2qffA00 | 1.20.1270.10 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.56 | 49.0 | 4.75e-01 | 100.0% | 93.2% |
| 3zssA02 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.56 | 46.0 | 4.41e-01 | 95.5% | 84.8% |
| 7e4gA01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.56 | 47.0 | 3.43e-01 | 95.5% | 43.1% |
| 2hxoA02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.56 | 37.0 | 2.91e-01 | 90.9% | 31.2% |
| 1wpaA01 | 6.10.140.340 | Special › Helix non-globular › Helix Hairpins › | 0.56 | 35.0 | 3.08e-01 | 74.2% | 43.4% |
| 2ba0A03 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.54 | 45.0 | 4.24e-01 | 95.5% | 74.7% |
| 1x42A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.54 | 39.0 | 3.73e-01 | 80.3% | 98.8% |
| 2fgeA04 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.54 | 38.0 | 2.67e-01 | 77.3% | 28.0% |
| 2m6uA00 | 1.20.81.20 | Mainly Alpha › Up-down Bundle › Receptor-associated Protein › | 0.53 | 42.0 | 3.97e-01 | 89.4% | 91.5% |
| 2gukA00 | 3.30.2190.10 | Alpha Beta › 2-Layer Sandwich › PG1857-like › PG1857-like | 0.51 | 34.0 | 2.96e-01 | 95.5% | 41.4% |
| 1aa7A02 | 1.10.10.180 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Influenza matrix protein M1, N-terminal subdomain 2 | 0.50 | 41.0 | 3.95e-01 | 90.9% | 98.7% |
| 3u9jA00 | 1.20.120.520 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › nmb1532 protein domain like | 0.50 | 44.0 | 3.35e-01 | 98.5% | 99.4% |
ECOD (22)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3599924 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.79 | 56.0 | 5.89e-01 | 84.8% | 83.3% |
| 3718035 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.68 | 52.0 | 5.28e-01 | 81.8% | 89.2% |
| 3334253 | 108.1.1.111 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › DUF7952 | 0.65 | 54.0 | 4.95e-01 | 90.9% | 70.6% |
| 5046473 | 601.3.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine-containing phosphotransfer domain, HPT domain › Histidine-containing phosphotransfer domain, HPT domain | 0.64 | 52.0 | 4.74e-01 | 100.0% | 66.7% |
| 3185917 | 375.1.9.12 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Zinc-nucleated domain of serine integrase › Wbp11 | 0.64 | 38.0 | 3.54e-01 | 72.7% | 45.9% |
| 3924451 | 3065.1.1.1 ↗ | alpha bundles › Fatty acid- and retinoid-binding proteins › Fatty acid- and retinoid-binding proteins › Fatty acid- and retinoid-binding proteins › ANIS5_cation-bd | 0.63 | 51.0 | 4.24e-01 | 90.9% | 85.0% |
| 3386454 | 601.18.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Oxygen-evolving enhancer protein 3 › Oxygen-evolving enhancer protein 3 | 0.63 | 54.0 | 4.79e-01 | 100.0% | 81.0% |
| 3927475 | 192.19.1.0 ↗ | alpha bundles › Long alpha-hairpin › YnzC-like › YnzC-like | 0.60 | 44.0 | 4.69e-01 | 77.3% | 94.5% |
| 4013155 | 376.1.1.100 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › PF26148 | 0.59 | 46.0 | 3.92e-01 | 86.4% | 60.0% |
| 3667997 | 3625.1.1.2 ↗ | alpha bundles › CRISPR RNA silencing complex Cmr2 subunit second helical domain › CRISPR RNA silencing complex Cmr2 subunit second helical domain › CRISPR RNA silencing complex Cmr2 subunit second helical domain › Ist1 | 0.59 | 43.0 | 4.12e-01 | 100.0% | 68.0% |
| 3676285 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.58 | 39.0 | 4.35e-01 | 72.7% | 92.0% |
| 3786128 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.58 | 45.0 | 4.37e-01 | 92.4% | 92.5% |
| 3974641 | 150.5.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like | 0.57 | 41.0 | 3.80e-01 | 75.8% | 67.1% |
| 3617417 | 3065.1.1.0 ↗ | alpha bundles › Fatty acid- and retinoid-binding proteins › Fatty acid- and retinoid-binding proteins › Fatty acid- and retinoid-binding proteins | 0.57 | 48.0 | 3.94e-01 | 97.0% | 84.6% |
| 4310805 | 11.1.1.154 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › GlgE_dom_N_S | 0.56 | 47.0 | 3.58e-01 | 100.0% | 38.9% |
| 3220614 | 632.21.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Helical bundle domain in endo-beta-N-acetylglucosaminidase F2 › Helical bundle domain in endo-beta-N-acetylglucosaminidase F2 | 0.55 | 44.0 | 4.17e-01 | 100.0% | 72.5% |
| 3781388 | 605.4.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › ROP protein › ROP protein | 0.55 | 46.0 | 4.46e-01 | 100.0% | 96.0% |
| 4321701 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.54 | 44.0 | 3.69e-01 | 100.0% | 95.6% |
| 3629201 | 3065.1.1.0 ↗ | alpha bundles › Fatty acid- and retinoid-binding proteins › Fatty acid- and retinoid-binding proteins › Fatty acid- and retinoid-binding proteins | 0.54 | 44.0 | 3.69e-01 | 97.0% | 81.5% |
| 3710934 | 633.2.1.0 ↗ | alpha bundles › Bromodomain-like › Carnobacteriocin B2 immunity protein › Carnobacteriocin B2 immunity protein | 0.53 | 45.0 | 4.12e-01 | 98.5% | 78.9% |
| 3948583 | 5060.2.1.1 ↗ | alpha bundles › V-type ATP synthase subunit C › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › T2SSF | 0.52 | 41.0 | 3.31e-01 | 87.9% | 53.3% |
| 3989457 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.51 | 44.0 | 3.16e-01 | 98.5% | 75.6% |