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MT325768.1__QJI52392.1__X__00095

Bact-Vir

MT325768.1__QJI52392.1__X__00095

Identity

Accession:
MT325768 ↗
Kingdom:
phage

Quality

75.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Psychrobacillus_phage_Perkons

TaxID: 2729574

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-65
PDB
Domain cluster: representative
CATH (52)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4m4zA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.80 59.0 6.54e-01 96.7% 100.0%
5ygbA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.78 64.0 5.81e-01 100.0% 66.3%
4ld6A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.76 63.0 5.06e-01 100.0% 47.0%
1yn8A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.75 64.0 6.49e-01 100.0% 94.9%
3m9qA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.75 69.0 6.46e-01 100.0% 83.3%
2dmoA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.75 62.0 5.93e-01 100.0% 79.4%
1x6gA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.73 63.0 5.70e-01 100.0% 70.4%
3upuA03 2.30.30.780 Mainly Beta › Roll › SH3 type barrels. › 0.73 65.0 5.02e-01 100.0% 93.9%
2l89A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.72 61.0 5.08e-01 100.0% 52.8%
4iupA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.72 63.0 5.91e-01 100.0% 79.2%
1uebA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.70 55.0 5.50e-01 100.0% 82.5%
3a5zB01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.69 54.0 5.37e-01 100.0% 82.5%
1k1zA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.69 62.0 5.64e-01 100.0% 80.8%
3oyyA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.68 53.0 5.22e-01 100.0% 78.8%
2n88A00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.68 47.0 4.82e-01 81.7% 75.9%
3o2zP00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.66 51.0 4.14e-01 83.3% 75.9%
1oxxK02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.66 46.0 5.20e-01 71.7% 95.6%
1zuuA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.66 55.0 5.62e-01 98.3% 100.0%
7u32F02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.66 50.0 5.35e-01 100.0% 98.0%
3kxtA00 2.30.30.610 Mainly Beta › Roll › SH3 type barrels. › Chromatin protein Cren7 0.66 49.0 5.07e-01 93.3% 89.3%
5l37C00 2.40.50.220 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › EutN/Ccml 0.65 47.0 4.16e-01 76.7% 88.4%
5aj3E01 3.30.230.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › 0.64 54.0 4.96e-01 96.7% 88.9%
2rcfA00 2.40.50.220 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › EutN/Ccml 0.64 46.0 4.15e-01 76.7% 92.7%
5yhoA02 3.30.1330.80 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Hypothetical protein, similar to alpha- acetolactate decarboxylase; domain 2 0.62 53.0 4.31e-01 100.0% 65.0%
1x0tA02 6.20.50.20 Special › Other non-globular › N-terminal domain of TfIIb › 0.61 40.0 4.44e-01 90.0% 91.1%
1whlA00 2.30.30.190 Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain 0.61 54.0 4.67e-01 100.0% 80.0%
1dz1A00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.61 48.0 4.61e-01 88.3% 78.6%
1u04A02 3.90.70.180 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › 0.60 52.0 4.29e-01 98.3% 78.6%
1o75A03 2.60.40.1300 Mainly Beta › Sandwich › Immunoglobulin-like › Penicillin-binding protein Tp47, domain C 0.60 41.0 3.28e-01 73.3% 89.8%
2nlkA02 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.60 44.0 2.97e-01 83.3% 28.5%
1khiA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.59 50.0 4.71e-01 100.0% 76.0%
3j7yD01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.59 47.0 3.86e-01 85.0% 52.8%
3exzB00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.58 46.0 3.54e-01 90.0% 87.1%
2cqaA01 2.40.50.360 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RuvBL1 DNA/RNA binding domain 0.57 47.0 4.39e-01 91.7% 94.6%
2r41A00 3.10.450.150 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › enterococcus faecalis protein 0.57 44.0 3.71e-01 85.0% 89.3%
4o8sA01 3.10.450.620 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › JHP933, nucleotidyltransferase-like core domain 0.56 45.0 3.58e-01 88.3% 76.8%
1sr9A02 3.30.160.270 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Alpha-isopropylmalate synthase LeuA, regulatory domain 0.56 43.0 3.26e-01 88.3% 66.5%
1cv8A00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.55 47.0 3.49e-01 100.0% 39.3%
7tzoA01 1.10.1070.11 Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, Domain 5 › Phosphatidylinositol 3-/4-kinase, catalytic domain 0.55 44.0 3.27e-01 93.3% 32.8%
2qgyB01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.55 44.0 3.42e-01 90.0% 81.0%
4p78C00 3.30.920.30 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Hypothetical protein. 0.54 42.0 4.08e-01 95.0% 77.3%
4wiwA02 3.10.50.10 Alpha Beta › Roll › Chitinase A; domain 3 › 0.54 39.0 3.83e-01 81.7% 100.0%
2dixA01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.54 43.0 4.01e-01 90.0% 75.6%
4w78G00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.53 40.0 3.13e-01 90.0% 87.7%
4dy0B02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.53 39.0 3.16e-01 81.7% 82.8%
4qhzA00 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.52 42.0 3.01e-01 100.0% 59.1%
3e99A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.52 41.0 3.26e-01 95.0% 81.8%
1fvuB00 3.10.100.10 Alpha Beta › Roll › Mannose-Binding Protein A; Chain A › Mannose-Binding Protein A, subunit A 0.52 44.0 3.58e-01 100.0% 80.2%
2c0cA01 3.90.180.10 Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain 0.51 41.0 3.09e-01 95.0% 77.0%
1jvnA02 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.51 41.0 2.72e-01 96.7% 42.2%
1vqqA01 3.10.450.100 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › NTF2-like; domain 1 0.50 40.0 3.48e-01 96.7% 89.9%
2it1A03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.50 39.0 3.88e-01 85.0% 93.4%
ECOD (66)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4049824 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.83 64.0 5.06e-01 100.0% 42.6%
3570369 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.79 62.0 5.41e-01 100.0% 56.7%
3730835 4.8.1.10 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › MSL3_chromo-like 0.78 66.0 5.59e-01 100.0% 57.9%
3819724 4.1.1.20 ↗ beta barrels › SH3 › SH3 › SH3 › BAH 0.78 69.0 4.87e-01 100.0% 54.1%
3750522 4.1.1.218 ↗ beta barrels › SH3 › SH3 › SH3 › PWP3A-B_N 0.75 61.0 5.03e-01 100.0% 49.1%
3913782 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 64.0 6.25e-01 100.0% 85.9%
3184389 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 67.0 4.77e-01 100.0% 46.9%
3410370 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 66.0 6.24e-01 100.0% 82.9%
3938484 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.74 63.0 5.02e-01 100.0% 46.7%
3784770 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.74 68.0 6.27e-01 100.0% 88.0%
3886492 4.1.1.154 ↗ beta barrels › SH3 › SH3 › SH3 › DUF4772 0.74 64.0 5.90e-01 100.0% 76.0%
3826141 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 66.0 5.74e-01 100.0% 74.4%
5043533 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 61.0 6.03e-01 100.0% 85.9%
3608236 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.72 57.0 5.61e-01 100.0% 80.0%
3550699 4.8.1.10 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › MSL3_chromo-like 0.72 65.0 5.54e-01 100.0% 63.2%
3306779 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.72 56.0 5.54e-01 100.0% 80.0%
3473981 4.1.1.12 ↗ beta barrels › SH3 › SH3 › SH3 › PWWP 0.72 64.0 5.03e-01 100.0% 63.2%
3770802 4.1.1.248 ↗ beta barrels › SH3 › SH3 › SH3 › CABIT 0.71 61.0 5.23e-01 100.0% 77.2%
3995204 295.1.1.4 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › COMM_domain 0.71 48.0 4.68e-01 70.0% 72.3%
4037383 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.71 56.0 5.51e-01 100.0% 80.0%
3347795 4.1.1.94 ↗ beta barrels › SH3 › SH3 › SH3 › SAWADEE 0.71 62.0 5.58e-01 100.0% 71.2%
4229837 4.1.1.354 ↗ beta barrels › SH3 › SH3 › SH3 › CAP_GLY, PF28930 0.71 64.0 4.45e-01 100.0% 41.1%
3441143 4.1.1.94 ↗ beta barrels › SH3 › SH3 › SH3 › SAWADEE 0.70 61.0 5.12e-01 100.0% 57.0%
3584555 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.70 64.0 6.10e-01 100.0% 85.7%
3251170 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.70 62.0 5.88e-01 100.0% 84.3%
4261760 4.1.1.58 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_3 0.70 62.0 5.34e-01 100.0% 72.6%
3728855 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 58.0 5.43e-01 100.0% 74.7%
3627576 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 63.0 6.19e-01 100.0% 92.3%
4077367 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.69 56.0 5.47e-01 100.0% 83.1%
3948467 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.69 56.0 5.50e-01 100.0% 83.1%
4599318 2.1.1.299 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S12 0.68 52.0 4.76e-01 83.3% 98.8%
5028505 2.1.1.1 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosom_S12_S23 0.67 52.0 3.95e-01 83.3% 62.1%
5032461 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 53.0 5.18e-01 100.0% 84.6%
2502534 2.1.1.1 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosom_S12_S23 0.65 50.0 4.48e-01 83.3% 73.6%
3939175 4.18.1.1 ↗ beta barrels › SH3 › Plus3 › Plus3 › Plus-3 0.64 59.0 4.31e-01 100.0% 40.0%
3460576 109.3.1.162 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_5 0.64 50.0 3.30e-01 85.0% 21.5%
3498558 4.18.1.1 ↗ beta barrels › SH3 › Plus3 › Plus3 › Plus-3 0.64 58.0 4.28e-01 100.0% 40.0%
5014254 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.63 46.0 4.68e-01 88.3% 78.3%
3254941 4.18.1.1 ↗ beta barrels › SH3 › Plus3 › Plus3 › Plus-3 0.63 58.0 4.44e-01 100.0% 46.2%
3670182 2.1.1.1 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosom_S12_S23 0.63 48.0 3.80e-01 81.7% 62.4%
3329012 4.18.1.1 ↗ beta barrels › SH3 › Plus3 › Plus3 › Plus-3 0.63 58.0 4.20e-01 100.0% 39.4%
3738161 4.18.1.1 ↗ beta barrels › SH3 › Plus3 › Plus3 › Plus-3 0.62 57.0 4.40e-01 100.0% 48.0%
3530890 2004.1.1.402 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › CABIT 0.62 53.0 4.76e-01 100.0% 84.1%
5030959 211.1.1.0 ↗ a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 0.62 49.0 4.53e-01 90.0% 76.2%
3770801 4.1.1.248 ↗ beta barrels › SH3 › SH3 › SH3 › CABIT 0.62 53.0 4.63e-01 100.0% 72.6%
3842362 1.1.5.76 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › CABIT 0.62 52.0 4.60e-01 100.0% 73.7%
573 4.1.1.18 ↗ beta barrels › SH3 › SH3 › SH3 › CAP_GLY 0.61 54.0 4.67e-01 100.0% 80.0%
3393555 220.1.1.158 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_LRR1 0.61 53.0 4.13e-01 100.0% 65.9%
3594572 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 51.0 3.81e-01 100.0% 38.1%
3797649 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.59 46.0 3.85e-01 88.3% 64.5%
3659202 1.1.11.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain 0.58 44.0 4.03e-01 83.3% 77.5%
3954203 211.1.1.0 ↗ a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 0.58 48.0 4.51e-01 93.3% 80.0%
3680492 4.1.1.298 ↗ beta barrels › SH3 › SH3 › SH3 › PF26133 0.57 51.0 4.01e-01 100.0% 68.0%
3639167 206.1.1.8 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PI3_PI4_kinase,FATC 0.57 47.0 2.87e-01 95.0% 26.2%
3458138 375.1.1.131 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › DUF702 0.56 45.0 4.45e-01 91.7% 96.9%
3933112 206.1.1.8 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PI3_PI4_kinase,FATC 0.56 47.0 2.85e-01 96.7% 25.8%
3245494 9.1.1.12 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › THAP4_heme-bd 0.56 46.0 3.35e-01 100.0% 76.1%
4998373 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.56 42.0 4.47e-01 93.3% 100.0%
3227860 206.1.1.8 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PI3_PI4_kinase,FATC 0.55 45.0 2.81e-01 95.0% 27.9%
5027896 504.1.1.0 ↗ a+b two layers › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB 0.55 42.0 3.44e-01 86.7% 90.4%
5021659 2.1.1.15 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.55 47.0 4.14e-01 95.0% 96.7%
3486078 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.52 43.0 2.72e-01 95.0% 36.8%
3801220 206.1.1.8 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PI3_PI4_kinase,FATC 0.51 41.0 2.52e-01 95.0% 23.6%
3714021 5.1.3.28 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › BNR_3 0.51 41.0 2.57e-01 96.7% 20.5%
1278471 243.1.1.7 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › MecA_N 0.51 41.0 3.46e-01 96.7% 86.0%
4012857 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.51 43.0 4.12e-01 95.0% 92.9%