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MT325768.1__QJI52427.1__X__00130
Bact-VirMT325768.1__QJI52427.1__X__00130
Identity
- Accession:
- MT325768 ↗
- Kingdom:
- phage
Quality
83.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 42-124
Domain cluster:
representative
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1dpgA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.73 | 34.0 | 2.26e-01 | 85.5% | 11.7% |
| 3hvnA02 | 3.30.1040.20 | Alpha Beta › 2-Layer Sandwich › Carboxypeptidase Inhibitor; Chain A › | 0.72 | 37.0 | 4.51e-01 | 85.5% | 77.4% |
| 1pfoA02 | 3.30.1040.20 | Alpha Beta › 2-Layer Sandwich › Carboxypeptidase Inhibitor; Chain A › | 0.68 | 35.0 | 4.21e-01 | 84.3% | 75.5% |
| 1fm2B03 | 2.30.120.10 | Mainly Beta › Roll › Penicillin G acylase, beta-roll domain › Aminohydrolase, N-terminal nucleophile (Ntn) domain, beta-sheet knob region | 0.68 | 37.0 | 4.15e-01 | 80.7% | 68.2% |
| 1v8cA02 | 3.30.1370.80 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › Molybdopterin cofactor biosynthesis MoaD-related, C-terminal domain | 0.65 | 30.0 | 3.05e-01 | 84.3% | 42.5% |
| 1nbwA02 | 3.90.470.30 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › Coenzyme B12-Dependent Enzyme linker domain | 0.58 | 45.0 | 3.80e-01 | 85.5% | 56.6% |
| 3n77A00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.55 | 37.0 | 3.21e-01 | 71.1% | 99.3% |
| 3sqfA00 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.55 | 32.0 | 3.07e-01 | 88.0% | 47.4% |
| 7z2bK01 | 3.40.850.10 | Alpha Beta › 3-Layer(aba) Sandwich › Kinesin › Kinesin motor domain | 0.55 | 46.0 | 3.27e-01 | 100.0% | 63.0% |
| 4yfbC02 | 2.30.120.10 | Mainly Beta › Roll › Penicillin G acylase, beta-roll domain › Aminohydrolase, N-terminal nucleophile (Ntn) domain, beta-sheet knob region | 0.55 | 33.0 | 3.43e-01 | 74.7% | 64.1% |
| 5vqjA00 | 2.60.120.180 | Mainly Beta › Sandwich › Jelly Rolls › Glycoside hydrolase family 11/12, catalytic domain | 0.54 | 39.0 | 2.87e-01 | 74.7% | 54.6% |
| 6nvxB02 | 2.30.120.10 | Mainly Beta › Roll › Penicillin G acylase, beta-roll domain › Aminohydrolase, N-terminal nucleophile (Ntn) domain, beta-sheet knob region | 0.54 | 33.0 | 3.43e-01 | 74.7% | 64.9% |
| 3zqmA00 | 6.10.140.2160 | Special › Helix non-globular › Helix Hairpins › | 0.54 | 29.0 | 3.38e-01 | 89.2% | 72.9% |
| 6w08A01 | 1.20.1170.10 | Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; › | 0.54 | 40.0 | 2.70e-01 | 80.7% | 63.9% |
| 5ib9A01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.51 | 43.0 | 3.11e-01 | 100.0% | 69.5% |
| 2xzmZ00 | 3.30.1230.20 | Alpha Beta › 2-Layer Sandwich › Hypothetical Cytosolic Protein; Chain: A; › Ribosomal protein S21 | 0.51 | 34.0 | 3.25e-01 | 86.7% | 57.7% |
| 3kioC01 | 2.40.128.680 | Mainly Beta › Beta Barrel › Lipocalin › | 0.51 | 36.0 | 3.55e-01 | 75.9% | 100.0% |
| 3aa0B02 | 3.90.1150.210 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit | 0.50 | 39.0 | 3.27e-01 | 86.7% | 66.5% |
ECOD (31)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5057420 | 5.1.2.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed | 0.74 | 43.0 | 2.89e-01 | 91.6% | 16.0% |
| 3471125 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.68 | 37.0 | 4.77e-01 | 74.7% | 97.8% |
| 3926817 | 219.1.1.25 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › LRAT | 0.66 | 41.0 | 3.23e-01 | 97.6% | 30.8% |
| 4606510 | 4263.2.1.0 ↗ | a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain | 0.64 | 47.0 | 4.66e-01 | 75.9% | 88.2% |
| 3705552 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.63 | 41.0 | 3.24e-01 | 90.4% | 33.3% |
| 4586503 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.62 | 42.0 | 3.66e-01 | 100.0% | 43.7% |
| 4941505 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.60 | 41.0 | 4.56e-01 | 84.3% | 89.2% |
| 3174953 | 69.1.1.2 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hom_end_hint | 0.60 | 39.0 | 2.88e-01 | 97.6% | 24.0% |
| 3587268 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.60 | 47.0 | 4.15e-01 | 84.3% | 90.0% |
| 3175102 | 2008.1.1.79 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Pet127 | 0.60 | 47.0 | 3.07e-01 | 85.5% | 65.1% |
| 3702518 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.60 | 40.0 | 3.66e-01 | 97.6% | 51.8% |
| 3786082 | 246.2.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos | 0.59 | 47.0 | 3.10e-01 | 85.5% | 79.5% |
| 3249428 | 304.48.1.20 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Thg1 | 0.59 | 49.0 | 3.39e-01 | 90.4% | 92.0% |
| 4487061 | 328.8.1.1 ↗ | a+b two layers › IF3-like › Schlafen 8 › Schlafen 8 › SLFN_AlbA_2 | 0.59 | 41.0 | 3.22e-01 | 72.3% | 57.1% |
| 4296288 | 2.1.1.6 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB | 0.56 | 44.0 | 4.10e-01 | 84.3% | 92.4% |
| 3495218 | 922.1.1.9 ↗ | few secondary structure elements › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP1_2 | 0.56 | 31.0 | 3.77e-01 | 85.5% | 88.0% |
| 4969719 | 4272.1.1.1 ↗ | a+b two layers › Nqo5-like › Nqo5-like › Nqo5-like › Complex1_30kDa | 0.56 | 39.0 | 3.30e-01 | 74.7% | 75.3% |
| 1758564 | 69.1.1.2 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hom_end_hint | 0.55 | 36.0 | 2.91e-01 | 97.6% | 31.6% |
| 3361760 | 2003.1.3.18 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › NAD_binding_8, Pyr_redox_3 | 0.54 | 38.0 | 2.80e-01 | 75.9% | 81.2% |
| 4877695 | 304.51.1.3 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR_assoc | 0.53 | 38.0 | 3.14e-01 | 75.9% | 80.5% |
| 4552467 | 4967.1.1.0 ↗ | alpha bundles › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases | 0.53 | 44.0 | 2.91e-01 | 91.6% | 70.9% |
| 4380775 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.52 | 39.0 | 2.98e-01 | 80.7% | 75.0% |
| 3280088 | 223.1.1.17 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › ScfRs | 0.52 | 32.0 | 3.03e-01 | 97.6% | 50.0% |
| 4518214 | 223.1.1.17 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › ScfRs | 0.52 | 31.0 | 3.01e-01 | 96.4% | 49.0% |
| 3958814 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.52 | 31.0 | 3.22e-01 | 96.4% | 61.3% |
| 3939681 | 5001.1.1.41 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srw | 0.50 | 39.0 | 2.65e-01 | 84.3% | 39.1% |
| 3777035 | 11.1.1.504 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Dynactin_p62 | 0.50 | 36.0 | 3.89e-01 | 85.5% | 89.9% |
| 3902130 | 375.1.1.107 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Dynactin_p62 | 0.50 | 36.0 | 3.89e-01 | 85.5% | 89.9% |
| 3852918 | 4290.1.1.8 ↗ | alpha duplicates or obligate multimers › HP0242-like › HP0242-like › HP0242-like › Dynactin_p62 | 0.50 | 36.0 | 3.87e-01 | 85.5% | 89.9% |
| 3995685 | 2.1.1.6 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB | 0.50 | 45.0 | 4.14e-01 | 100.0% | 84.4% |
| 3322969 | 213.1.1.86 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › PF31063 | 0.50 | 39.0 | 3.15e-01 | 86.7% | 55.9% |