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MT330372.1__QJI52259.1__X__00070

Bact-Vir

MT330372.1__QJI52259.1__X__00070

Identity

Accession:
MT330372 ↗
Kingdom:
phage

Quality

92.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Casjensviridae› Jacunavirus› Cronobacter_phage_JC01

TaxID: 2729575

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 14-108
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF19419.6 best DUF5983 32.5 1.20e-07 100.0% 95.6%
CATH (12)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2hpsA00 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.59 49.0 4.10e-01 96.8% 94.6%
2o61A03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 43.0 4.16e-01 81.1% 99.1%
2pi0A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 41.0 4.18e-01 77.9% 100.0%
4hlyA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 42.0 4.11e-01 78.9% 99.1%
4p55B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 42.0 4.21e-01 78.9% 99.0%
3jtgA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 40.0 4.24e-01 78.9% 97.6%
3m1tA00 1.10.3210.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 0.53 41.0 3.05e-01 85.3% 80.7%
5w3gA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 39.0 3.74e-01 78.9% 76.4%
1u08A01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.52 39.0 3.45e-01 80.0% 64.8%
1lfuP00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.52 31.0 3.33e-01 84.2% 68.3%
4nhxA01 2.60.120.620 Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain 0.50 38.0 3.05e-01 85.3% 91.9%
1t8sA02 3.40.50.1580 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain 0.50 39.0 2.87e-01 88.4% 98.0%
ECOD (16)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4996898 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.62 32.0 3.76e-01 82.1% 71.9%
4976021 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.61 39.0 3.88e-01 82.1% 62.0%
3538312 101.1.1.1 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.59 30.0 3.93e-01 78.9% 92.0%
3997838 101.1.1.1 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.58 31.0 3.61e-01 83.2% 73.8%
3527527 101.1.2.11 ↗ alpha arrays › HTH › HTH › winged helix domain › IRF 0.58 43.0 4.08e-01 78.9% 93.0%
3694221 101.1.1.36 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Homeobox_KN 0.58 31.0 3.79e-01 80.0% 83.3%
3772154 101.1.2.11 ↗ alpha arrays › HTH › HTH › winged helix domain › IRF 0.57 44.0 4.09e-01 82.1% 91.1%
3470203 101.1.1.36 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Homeobox_KN 0.57 31.0 3.96e-01 82.1% 92.7%
3547704 101.1.2.11 ↗ alpha arrays › HTH › HTH › winged helix domain › IRF 0.57 43.0 4.03e-01 80.0% 93.0%
223480 101.1.2.11 ↗ alpha arrays › HTH › HTH › winged helix domain › IRF 0.56 42.0 4.11e-01 78.9% 99.1%
162321 101.1.1.36 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Homeobox_KN 0.56 31.0 3.32e-01 82.1% 60.2%
5046580 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.55 35.0 3.58e-01 82.1% 66.7%
4113229 101.1.2.2 ↗ alpha arrays › HTH › HTH › winged helix domain › Ets 0.55 41.0 3.80e-01 78.9% 70.0%
4039619 101.1.2.2 ↗ alpha arrays › HTH › HTH › winged helix domain › Ets 0.54 40.0 3.80e-01 78.9% 73.0%
3528634 101.1.1.36 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Homeobox_KN 0.53 31.0 3.30e-01 82.1% 63.5%
3343813 101.1.1.36 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Homeobox_KN 0.53 31.0 3.66e-01 76.8% 86.2%
D2 high residues 114-206
PDB
Domain cluster: rep: IMGVR_UViG_3300013099_000017-3300013099-Ga0164315_10000001120__D3-81
CATH (11)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4bjyA02 3.30.9.30 Alpha Beta › 2-Layer Sandwich › D-Amino Acid Oxidase; Chain A, domain 2 › 0.68 35.0 2.65e-01 100.0% 20.4%
5bmnA04 3.30.310.50 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain 0.59 39.0 4.08e-01 100.0% 74.7%
2gu1A01 3.10.450.350 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.54 38.0 3.90e-01 72.0% 87.5%
3c6kA01 3.30.160.110 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Sirohaem synthase, central domain 0.54 37.0 3.69e-01 100.0% 69.1%
1h6qA00 2.170.150.10 Mainly Beta › Beta Complex › Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A › Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A 0.52 45.0 3.82e-01 100.0% 80.4%
2ex2A01 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.52 46.0 3.43e-01 100.0% 83.7%
1nrjA00 3.30.450.60 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.52 42.0 3.64e-01 100.0% 56.5%
4tyzA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 37.0 3.62e-01 79.6% 88.1%
3cueC00 3.30.450.70 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.51 40.0 3.45e-01 100.0% 54.5%
5jh8A02 3.10.50.10 Alpha Beta › Roll › Chitinase A; domain 3 › 0.51 31.0 3.49e-01 100.0% 83.6%
3uaqB02 2.40.160.90 Mainly Beta › Beta Barrel › Porin › 0.50 39.0 3.27e-01 83.9% 87.1%
ECOD (23)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3638407 244.1.1.0 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C 0.66 37.0 2.97e-01 100.0% 27.8%
3698373 244.1.1.0 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C 0.66 37.0 3.22e-01 100.0% 35.7%
2524024 244.1.1.0 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C 0.63 36.0 3.45e-01 100.0% 46.8%
1692470 244.1.1.0 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C 0.62 36.0 3.41e-01 100.0% 46.9%
3688807 244.1.1.0 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C 0.62 37.0 3.47e-01 100.0% 47.0%
4317800 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.58 39.0 3.41e-01 100.0% 45.7%
4947596 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.57 31.0 2.94e-01 100.0% 43.6%
3599873 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.55 39.0 2.90e-01 100.0% 28.6%
3764290 708.1.2.1 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › TCTP 0.54 48.0 4.10e-01 100.0% 78.7%
4998374 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.54 40.0 3.63e-01 100.0% 57.6%
4028834 223.2.1.7 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › SRP-alpha_N 0.54 38.0 3.54e-01 100.0% 57.5%
3271763 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.54 40.0 3.47e-01 79.6% 70.7%
4110294 223.1.1.118 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PF30448 0.54 41.0 4.02e-01 100.0% 75.0%
3223489 223.2.1.7 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › SRP-alpha_N 0.54 39.0 3.49e-01 100.0% 54.6%
4999190 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.54 41.0 3.64e-01 100.0% 57.7%
3788228 220.1.1.4 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Ran_BP1 0.52 43.0 3.88e-01 92.5% 64.4%
3937820 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.52 41.0 4.25e-01 100.0% 91.8%
3698579 223.2.1.5 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.52 43.0 4.07e-01 100.0% 75.5%
5077835 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.52 39.0 3.55e-01 100.0% 60.0%
5076775 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.51 40.0 3.58e-01 100.0% 60.0%
4062178 331.2.1.1 ↗ a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV 0.51 36.0 3.64e-01 100.0% 75.6%
4965116 331.2.1.1 ↗ a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV 0.51 35.0 3.60e-01 100.0% 75.0%
3636874 220.1.1.69 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Meiotic_rec114 0.51 42.0 3.73e-01 93.5% 78.6%