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MT334653.1__QJI10811.1__GuL6_255__00255

Bact-Vir

MT334653.1__QJI10811.1__GuL6_255__00255

Identity

Accession:
MT334653 ↗
Kingdom:
phage

Quality

83.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pantevenvirales› Straboviridae› Pseudotevenvirus› Buttiauxella_phage_vB_ButM_GuL6

TaxID: 2729539

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-81
PDB
Domain cluster: rep: ON528725.1__URY11388.1__X__00237__D17-97
CATH (26)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2heqA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.66 44.0 5.00e-01 100.0% 98.1%
1wzoA01 2.30.30.370 Mainly Beta › Roll › SH3 type barrels. › FAH 0.61 31.0 3.77e-01 100.0% 82.5%
2i0zA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.61 52.0 3.62e-01 97.3% 85.8%
4rslA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.60 51.0 3.68e-01 96.0% 78.3%
4dgkA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.60 50.0 4.01e-01 94.7% 82.4%
3npfB01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.60 44.0 4.64e-01 100.0% 90.9%
3nlcA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.60 51.0 3.61e-01 97.3% 82.3%
2aqjA00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.59 49.0 3.03e-01 96.0% 63.4%
4fk1A02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.59 49.0 4.41e-01 96.0% 98.2%
4wctA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.59 51.0 3.60e-01 97.3% 64.4%
2fhdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.58 39.0 4.20e-01 100.0% 83.9%
5uaoC00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.58 48.0 2.95e-01 96.0% 60.9%
4ntdA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.58 49.0 4.34e-01 96.0% 98.2%
2culA00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.58 48.0 3.53e-01 97.3% 86.7%
3fg2P02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.57 48.0 4.18e-01 98.7% 97.6%
6fhoA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.57 47.0 3.57e-01 96.0% 58.1%
4hcsA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.55 38.0 3.96e-01 72.0% 83.6%
6lxgA01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.54 44.0 4.44e-01 100.0% 91.8%
1k8kA04 3.90.640.10 Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 0.54 44.0 4.11e-01 90.7% 90.2%
1nr4C00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.53 37.0 3.89e-01 72.0% 83.3%
3gf8A02 2.60.40.2090 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 40.0 3.44e-01 84.0% 96.8%
3kbgA03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.52 33.0 3.64e-01 100.0% 87.5%
5ig0A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.52 41.0 3.57e-01 92.0% 84.0%
1vmoA00 2.100.10.20 Mainly Beta › Aligned Prism › Vitelline Membrane Outer Layer Protein I, subunit A › Vitelline membrane outer layer protein I (VOMI) 0.52 44.0 3.54e-01 100.0% 93.9%
3bosA02 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.51 35.0 3.75e-01 72.0% 97.0%
3dv9A02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.50 38.0 3.97e-01 89.3% 91.4%
ECOD (32)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
None — 0.63 54.0 3.47e-01 96.0% 62.0%
3178002 2006.1.1.13 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Acid_PPase 0.63 44.0 3.33e-01 73.3% 52.8%
None — 0.63 53.0 3.30e-01 96.0% 78.9%
None — 0.62 53.0 3.51e-01 96.0% 67.4%
3245032 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 49.0 4.92e-01 100.0% 86.7%
None — 0.61 51.0 3.17e-01 93.3% 77.3%
None — 0.61 47.0 2.89e-01 85.3% 67.0%
3639287 244.1.1.0 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C 0.61 53.0 3.14e-01 97.3% 45.4%
3315909 2003.1.2.18 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.61 50.0 3.06e-01 93.3% 88.6%
3696195 244.1.1.0 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C 0.60 51.0 3.09e-01 96.0% 93.1%
None — 0.60 51.0 3.17e-01 96.0% 76.2%
4080040 2003.1.2.18 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.60 50.0 3.10e-01 96.0% 93.9%
4957029 2003.1.2.24 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.60 50.0 3.46e-01 96.0% 88.7%
3656714 2003.1.2.24 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.59 42.0 3.97e-01 74.7% 90.0%
9289 2003.1.2.20 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › HI0933_like 0.59 50.0 3.80e-01 97.3% 89.1%
4358874 2003.1.2.18 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.59 50.0 3.19e-01 96.0% 85.8%
4171493 2003.1.2.18 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.59 50.0 3.22e-01 96.0% 87.6%
4946511 2003.1.2.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.59 50.0 3.30e-01 97.3% 49.3%
4019079 2003.1.2.12 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › DAO 0.58 49.0 3.08e-01 97.3% 52.3%
2131270 2003.1.2.24 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.57 48.0 3.65e-01 94.7% 43.5%
4188685 2003.1.2.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.57 47.0 3.31e-01 96.0% 62.2%
1949142 2003.1.2.21 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Trp_halogenase 0.57 48.0 3.48e-01 97.3% 89.8%
1822940 2003.1.2.18 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.56 41.0 2.88e-01 78.7% 100.0%
4236763 2003.1.2.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.54 45.0 4.02e-01 98.7% 92.5%
4975197 2003.1.2.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.54 40.0 3.19e-01 90.7% 38.1%
3563494 223.1.1.115 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PF30396 0.53 43.0 3.52e-01 93.3% 87.7%
4149372 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.53 35.0 3.78e-01 72.0% 80.0%
3591459 220.1.1.8 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.52 42.0 4.11e-01 90.7% 84.7%
4998119 213.1.1.29 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_9 0.52 39.0 3.09e-01 82.7% 48.6%
4013287 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.52 38.0 4.17e-01 94.7% 100.0%
3486058 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.52 45.0 3.13e-01 100.0% 41.2%
3467884 2003.1.2.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.50 38.0 2.53e-01 90.7% 18.6%
D2 high residues 94-157
PDB
Domain cluster: representative
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4aflA00 6.10.140.1740 Special › Helix non-globular › Helix Hairpins › 0.71 63.0 5.27e-01 100.0% 58.8%
1t10A01 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.67 46.0 2.81e-01 71.9% 61.5%
3fxqB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 50.0 4.48e-01 84.4% 84.4%
6lpfA01 1.10.730.20 Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › 0.58 43.0 3.15e-01 85.9% 30.7%
2esnA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 39.0 3.53e-01 82.8% 80.9%
4n4nB00 3.90.640.100 Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › 0.50 32.0 3.34e-01 70.3% 73.2%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4946919 4271.1.1.0 ↗ alpha complex topology › PriB N-terminal domain-like › PriB N-terminal domain-like › PriB N-terminal domain-like 0.69 53.0 3.70e-01 84.4% 49.5%
3256986 4106.1.1.1 ↗ few secondary structure elements › Zinc hairpin stack › Zinc hairpin stack › Zinc hairpin stack › DHHC 0.68 55.0 3.71e-01 89.1% 25.8%
5035979 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.63 43.0 3.53e-01 71.9% 62.5%
3641067 2007.5.1.20 ↗ a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › PC-Esterase,PMR5N 0.57 43.0 2.92e-01 82.8% 34.3%