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MT354569.1__QOC57878.1__phiK7B1_023__00023
Bact-VirMT354569.1__QOC57878.1__phiK7B1_023__00023
Identity
- Accession:
- MT354569 ↗
- Kingdom:
- phage
Quality
79.9
mean pLDDT
Taxonomy
TaxID: 2755401
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-57
Domain cluster:
representative
CATH (41)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4abmD00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.84 | 74.0 | 6.67e-01 | 98.2% | 77.9% |
| 3lssA01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.80 | 72.0 | 5.70e-01 | 100.0% | 75.0% |
| 2jdiH02 | 1.20.5.440 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › ATP synthase delta/epsilon subunit, C-terminal domain | 0.78 | 54.0 | 6.08e-01 | 75.4% | 97.6% |
| 1skvA00 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.78 | 67.0 | 6.47e-01 | 96.5% | 85.9% |
| 2a26B01 | 4.10.860.10 | Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › UVR domain | 0.77 | 55.0 | 6.13e-01 | 82.5% | 97.7% |
| 1zpyA00 | 6.10.140.1960 | Special › Helix non-globular › Helix Hairpins › | 0.77 | 67.0 | 5.75e-01 | 100.0% | 61.5% |
| 4cqiA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.76 | 69.0 | 5.53e-01 | 100.0% | 92.5% |
| 1lvfB00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.76 | 67.0 | 5.52e-01 | 100.0% | 58.7% |
| 2e9xA01 | 1.20.58.1030 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.76 | 63.0 | 4.83e-01 | 98.2% | 40.6% |
| 1pd3A00 | 1.10.287.230 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.76 | 59.0 | 6.10e-01 | 86.0% | 96.3% |
| 4nb5B02 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.76 | 61.0 | 5.98e-01 | 93.0% | 84.4% |
| 1vf7A03 | 1.10.287.470 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.75 | 63.0 | 6.28e-01 | 98.2% | 88.3% |
| 4aflA00 | 6.10.140.1740 | Special › Helix non-globular › Helix Hairpins › | 0.75 | 64.0 | 5.39e-01 | 98.2% | 56.9% |
| 3r84A00 | 1.10.287.3490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.75 | 63.0 | 5.59e-01 | 100.0% | 65.4% |
| 3icxA01 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.75 | 62.0 | 5.74e-01 | 96.5% | 80.0% |
| 4h63H01 | 1.20.58.1710 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.75 | 65.0 | 6.07e-01 | 98.2% | 87.5% |
| 2cazD00 | 6.10.140.820 | Special › Helix non-globular › Helix Hairpins › | 0.74 | 60.0 | 5.97e-01 | 93.0% | 85.0% |
| 1b3qA01 | 1.10.287.560 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Histidine kinase CheA-like, homodimeric domain | 0.74 | 62.0 | 6.12e-01 | 94.7% | 93.5% |
| 4e4eA01 | 1.10.287.990 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Fe,Mn superoxide dismutase (SOD) domain | 0.73 | 65.0 | 6.07e-01 | 100.0% | 80.3% |
| 2yf4F00 | 1.10.3420.10 | Mainly Alpha › Orthogonal Bundle › putative ntp pyrophosphohydrolase like fold › putative ntp pyrophosphohydrolase like domain | 0.73 | 62.0 | 4.62e-01 | 94.7% | 39.9% |
| 4rg8A04 | 1.10.287.1240 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.73 | 60.0 | 5.93e-01 | 94.7% | 98.4% |
| 4v1gA00 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.73 | 62.0 | 5.51e-01 | 98.2% | 90.6% |
| 4ielA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.72 | 58.0 | 4.68e-01 | 91.2% | 48.3% |
| 3fd9A03 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.71 | 57.0 | 5.40e-01 | 94.7% | 80.8% |
| 4dylA02 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.71 | 59.0 | 5.11e-01 | 98.2% | 61.7% |
| 1ij5A01 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.71 | 59.0 | 5.43e-01 | 94.7% | 72.4% |
| 3l1nA01 | 6.10.140.790 | Special › Helix non-globular › Helix Hairpins › | 0.69 | 51.0 | 5.31e-01 | 82.5% | 94.1% |
| 4nsmA00 | 6.10.250.2770 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.69 | 59.0 | 5.52e-01 | 100.0% | 78.9% |
| 6iknD01 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.68 | 56.0 | 3.71e-01 | 98.2% | 23.6% |
| 1s5jA04 | 1.10.287.690 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain | 0.68 | 55.0 | 5.37e-01 | 86.0% | 82.0% |
| 1b06A01 | 1.10.287.990 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Fe,Mn superoxide dismutase (SOD) domain | 0.68 | 58.0 | 5.59e-01 | 100.0% | 86.6% |
| 2wgmA01 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.67 | 55.0 | 5.03e-01 | 98.2% | 98.8% |
| 3t98B00 | 6.10.140.1350 | Special › Helix non-globular › Helix Hairpins › | 0.67 | 55.0 | 4.98e-01 | 100.0% | 68.6% |
| 1u7lA02 | 1.20.1460.10 | Mainly Alpha › Up-down Bundle › subunit c (vma5p) of the yeast v-atpase, domain 2 › subunit c (vma5p) of the yeast v-atpase, domain 2 | 0.66 | 54.0 | 3.97e-01 | 100.0% | 39.3% |
| 2xokP00 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.64 | 53.0 | 4.95e-01 | 98.2% | 93.2% |
| 6qumQ00 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.64 | 56.0 | 5.16e-01 | 98.2% | 89.2% |
| 1zoyD00 | 1.20.1300.10 | Mainly Alpha › Up-down Bundle › 3 helical TM bundles of succinate and fumarate reductases › Fumarate reductase/succinate dehydrogenase, transmembrane subunit | 0.63 | 51.0 | 4.28e-01 | 89.5% | 52.9% |
| 3purA03 | 1.20.58.1360 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.63 | 53.0 | 4.34e-01 | 96.5% | 50.9% |
| 5mmjn01 | 1.10.287.1480 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.59 | 47.0 | 4.16e-01 | 93.0% | 58.4% |
| 3umgA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.55 | 44.0 | 4.16e-01 | 89.5% | 95.8% |
| 3r0xA02 | 3.40.50.1100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.55 | 44.0 | 3.41e-01 | 86.0% | 53.7% |
ECOD (41)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4942916 | 601.12.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › Nickel-containing superoxide dismutase, NiSOD › Nickel-containing superoxide dismutase, NiSOD › Sod_Ni | 0.87 | 78.0 | 5.57e-01 | 98.2% | 62.6% |
| 3829240 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.80 | 70.0 | 5.55e-01 | 100.0% | 48.3% |
| 3793286 | 4177.1.1.2 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › BAR | 0.80 | 72.0 | 4.89e-01 | 100.0% | 71.0% |
| 3676480 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.80 | 72.0 | 6.15e-01 | 100.0% | 63.3% |
| 2636640 | 192.15.1.3 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › Vps23_core | 0.79 | 70.0 | 6.27e-01 | 100.0% | 71.4% |
| 3583647 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.79 | 59.0 | 5.37e-01 | 82.5% | 61.3% |
| 3503725 | 4177.1.1.2 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › BAR | 0.79 | 69.0 | 4.71e-01 | 98.2% | 31.0% |
| 3819961 | 3291.1.1.225 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › AAA_lid_At3g28540 | 0.78 | 68.0 | 5.23e-01 | 100.0% | 43.1% |
| 3929613 | 4177.1.1.1 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › FCH | 0.78 | 69.0 | 4.31e-01 | 100.0% | 19.7% |
| 3500901 | 4177.1.1.2 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › BAR | 0.78 | 69.0 | 4.78e-01 | 100.0% | 32.6% |
| 3551506 | 4177.1.1.1 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › FCH | 0.77 | 68.0 | 4.27e-01 | 100.0% | 19.7% |
| 3291377 | 605.1.1.4 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA_3 | 0.77 | 67.0 | 5.65e-01 | 98.2% | 61.1% |
| 3385950 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.77 | 66.0 | 6.23e-01 | 98.2% | 82.9% |
| 1291200 | 4177.1.1.1 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › FCH | 0.77 | 67.0 | 4.26e-01 | 100.0% | 20.3% |
| 3935633 | 1203.1.2.1 ↗ | alpha bundles › Shroom domain 2 › Shroom domain 2 › Human SD2 › ASD2 | 0.77 | 65.0 | 4.63e-01 | 100.0% | 31.9% |
| 3430567 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.76 | 62.0 | 6.10e-01 | 91.2% | 85.0% |
| 4005523 | 3860.1.1.167 ↗ | alpha bundles › Myosin VI lever arm › Myosin VI lever arm › Myosin VI lever arm › MscS_porin | 0.76 | 68.0 | 4.89e-01 | 100.0% | 65.6% |
| 3010304 | 5001.1.1.0 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like | 0.76 | 60.0 | 6.14e-01 | 89.5% | 98.2% |
| 3177141 | 6155.1.1.2 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › PQ-loop | 0.75 | 66.0 | 5.52e-01 | 98.2% | 57.9% |
| 3497418 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.75 | 64.0 | 5.24e-01 | 93.0% | 53.0% |
| 4042824 | 192.8.1.0 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain | 0.75 | 65.0 | 5.77e-01 | 100.0% | 68.8% |
| 3302552 | 192.15.1.0 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains | 0.75 | 61.0 | 4.69e-01 | 94.7% | 39.3% |
| 5037513 | 2498.1.1.19 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M32 | 0.75 | 66.0 | 3.80e-01 | 100.0% | 19.2% |
| 3577907 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.75 | 64.0 | 4.20e-01 | 100.0% | 23.5% |
| 3674701 | 5086.1.1.11 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › UPF0114 | 0.74 | 63.0 | 4.68e-01 | 100.0% | 36.8% |
| 3590890 | 2004.1.1.430 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran, ABC_tran_Xtn | 0.74 | 65.0 | 3.76e-01 | 100.0% | 10.4% |
| 5039854 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.72 | 61.0 | 5.66e-01 | 100.0% | 78.7% |
| 4469296 | 3809.1.1.2 ↗ | alpha bundles › Uncharacterized protein CV0426 › Uncharacterized protein CV0426 › Uncharacterized protein CV0426 › Caudo_TAP | 0.71 | 61.0 | 5.72e-01 | 96.5% | 84.3% |
| 3186154 | 622.1.1.7 ↗ | alpha bundles › YvfG-like › HSC20 (HSCB), C-terminal oligomerisation domain › HSC20 (HSCB), C-terminal oligomerisation domain › DUF7607 | 0.71 | 63.0 | 5.04e-01 | 98.2% | 52.7% |
| 3260684 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.71 | 56.0 | 5.73e-01 | 93.0% | 90.9% |
| 5063587 | 611.9.1.0 ↗ | alpha bundles › N-cbl like › Resistance protein (Rx) N-terminal domain › Resistance protein (Rx) N-terminal domain | 0.71 | 60.0 | 5.24e-01 | 93.0% | 62.4% |
| 3408094 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.71 | 60.0 | 4.66e-01 | 100.0% | 43.0% |
| 4007679 | 192.15.1.109 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › Caudo_TAP | 0.70 | 59.0 | 5.49e-01 | 96.5% | 78.4% |
| 3725376 | 192.1.1.15 ↗ | alpha bundles › Long alpha-hairpin › GreA transcript cleavage protein, N-terminal domain › GreA transcript cleavage protein, N-terminal domain › DUF6604 | 0.69 | 57.0 | 5.20e-01 | 96.5% | 70.0% |
| 3634125 | 150.5.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like | 0.68 | 56.0 | 5.55e-01 | 93.0% | 88.3% |
| 4860885 | 633.6.1.6 ↗ | alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like › ACAD9-ACADV_C | 0.67 | 57.0 | 4.74e-01 | 100.0% | 54.3% |
| 3191997 | 5041.1.1.15 ↗ | extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › Tmemb_170 | 0.66 | 54.0 | 4.42e-01 | 93.0% | 53.6% |
| 3598538 | 604.3.1.0 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain | 0.64 | 47.0 | 4.56e-01 | 80.7% | 73.8% |
| 3510298 | 605.1.1.140 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HIG_1_N | 0.63 | 52.0 | 4.85e-01 | 100.0% | 73.3% |
| 4870082 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.63 | 51.0 | 5.02e-01 | 100.0% | 90.9% |
| 3471229 | 148.1.3.13 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_9 | 0.59 | 52.0 | 3.16e-01 | 94.7% | 21.3% |