←Back to structures

MT360681.1__QJT70593.1__SD1_65__00064

Bact-Vir

MT360681.1__QJT70593.1__SD1_65__00064

Identity

Accession:
MT360681 ↗
Kingdom:
phage

Quality

93.9 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Drexlerviridae› Hanrivervirus› Shigella_phage_2019SD1

TaxID: 2848074

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-96
PDB
Domain cluster: representative
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2jmkA00 3.30.420.600 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Thermoplasma acidophilum protein TA0956 0.54 38.0 3.66e-01 100.0% 63.6%
6n9aB02 3.30.420.200 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 0.53 30.0 3.49e-01 97.9% 78.3%
3qvqA00 3.20.20.190 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphatidylinositol (PI) phosphodiesterase 0.52 38.0 2.92e-01 78.9% 93.2%
3grlA00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.50 36.0 2.24e-01 75.8% 40.3%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3287248 323.1.1.3 ↗ a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.57 39.0 2.80e-01 70.5% 77.7%
3671443 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.55 31.0 3.67e-01 97.9% 81.5%
3951185 323.1.1.3 ↗ a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.52 37.0 2.79e-01 73.7% 70.8%
5012133 323.1.1.3 ↗ a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.52 41.0 3.11e-01 86.3% 75.5%
3515827 242.2.1.6 ↗ a+b two layers › Homing endonucleases-like › tRNA-intron endonuclease N-terminal domain-like › tRNA-intron endonuclease N-terminal domain-like › tRNA_int_end_N2 0.52 31.0 3.48e-01 96.8% 76.0%