←Back to structures
MT362618.1__QJT70449.1__X__00088
Bact-VirMT362618.1__QJT70449.1__X__00088
Identity
- Accession:
- MT362618 ↗
- Kingdom:
- phage
Quality
86.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-37
Domain cluster:
representative
CATH (33)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4gi3C00 | 3.30.60.30 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.68 | 57.0 | 4.90e-01 | 100.0% | 59.6% |
| 3loiA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.66 | 53.0 | 3.46e-01 | 100.0% | 23.7% |
| 3d3kA00 | 3.40.50.10260 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › YjeF N-terminal domain | 0.65 | 52.0 | 3.23e-01 | 100.0% | 97.0% |
| 2vfrA02 | 3.30.465.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › | 0.65 | 52.0 | 3.62e-01 | 100.0% | 26.9% |
| 1pzxA02 | 2.20.28.50 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › DegV, N-terminal domain, peripheral subdomain | 0.64 | 50.0 | 5.05e-01 | 100.0% | 88.6% |
| 2kswA01 | 3.30.1490.260 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › | 0.64 | 51.0 | 4.78e-01 | 100.0% | 71.7% |
| 2qqrA02 | 3.10.330.70 | Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › | 0.64 | 51.0 | 4.62e-01 | 100.0% | 98.1% |
| 3tj8A02 | 3.30.70.790 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › UreE, C-terminal domain | 0.63 | 47.0 | 4.01e-01 | 100.0% | 74.3% |
| 1yudA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.63 | 51.0 | 3.41e-01 | 100.0% | 23.9% |
| 3fmaA00 | 3.30.1490.40 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › GYF domain | 0.62 | 48.0 | 3.90e-01 | 100.0% | 44.4% |
| 3rkgA01 | 2.40.128.330 | Mainly Beta › Beta Barrel › Lipocalin › | 0.61 | 46.0 | 3.63e-01 | 100.0% | 81.9% |
| 2bkfA01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.60 | 50.0 | 3.87e-01 | 100.0% | 91.6% |
| 1epfA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 45.0 | 3.43e-01 | 94.1% | 78.1% |
| 3r5dA02 | 3.30.60.70 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › Trimeric LpxA-like enzymes | 0.59 | 41.0 | 4.00e-01 | 100.0% | 65.9% |
| 1ca1A02 | 2.60.60.20 | Mainly Beta › Sandwich › Lipoxygenase-1 › PLAT/LH2 domain | 0.58 | 46.0 | 3.34e-01 | 100.0% | 40.8% |
| 4f4oC03 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.58 | 45.0 | 3.55e-01 | 100.0% | 55.1% |
| 2x4lA01 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.58 | 45.0 | 3.11e-01 | 97.1% | 99.3% |
| 2xguB00 | 1.10.375.10 | Mainly Alpha › Orthogonal Bundle › Human Immunodeficiency Virus Type 1 Capsid Protein › Human Immunodeficiency Virus Type 1 Capsid Protein | 0.57 | 43.0 | 3.01e-01 | 88.2% | 58.2% |
| 1u7kA00 | 1.10.375.10 | Mainly Alpha › Orthogonal Bundle › Human Immunodeficiency Virus Type 1 Capsid Protein › Human Immunodeficiency Virus Type 1 Capsid Protein | 0.56 | 40.0 | 2.88e-01 | 85.3% | 55.7% |
| 1wh2A01 | 3.30.1490.40 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › GYF domain | 0.56 | 41.0 | 3.70e-01 | 100.0% | 68.9% |
| 1zr6A02 | 3.30.465.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › | 0.55 | 42.0 | 2.98e-01 | 100.0% | 26.2% |
| 4chkB00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.55 | 41.0 | 3.32e-01 | 100.0% | 84.6% |
| 2iteA00 | 2.60.40.1850 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.55 | 41.0 | 3.02e-01 | 100.0% | 34.7% |
| 3b34A04 | 2.60.40.1840 | Mainly Beta › Sandwich › Immunoglobulin-like › Aminopeptidase N, middle-beta domain | 0.54 | 42.0 | 3.20e-01 | 100.0% | 45.1% |
| 7c2fB01 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.54 | 37.0 | 3.10e-01 | 100.0% | 32.6% |
| 1f02T00 | 4.10.820.10 | Few Secondary Structures › Irregular › Translocated Intimin Receptor; Chain T › Translocated intimin receptor, central domain | 0.54 | 40.0 | 3.33e-01 | 79.4% | 83.3% |
| 1uvgA01 | 3.30.60.30 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.54 | 39.0 | 3.50e-01 | 100.0% | 51.7% |
| 4izoA02 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.53 | 40.0 | 3.51e-01 | 100.0% | 52.2% |
| 3nyiB01 | 3.40.50.10170 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.53 | 38.0 | 2.74e-01 | 100.0% | 23.6% |
| 3nrfA00 | 2.60.40.4110 | Mainly Beta › Sandwich › Immunoglobulin-like › Protein of unknown function DUF4354 | 0.52 | 43.0 | 3.19e-01 | 100.0% | 51.0% |
| 3o0lA00 | 2.60.40.3230 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 39.0 | 2.96e-01 | 100.0% | 48.6% |
| 3iv6A02 | 1.10.150.330 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › zn-dependent alcohol dehydrogenase | 0.52 | 39.0 | 3.23e-01 | 85.3% | 80.0% |
| 2levA00 | 4.10.430.10 | Few Secondary Structures › Irregular › H-NS DNA Binding Protein › Histone-like protein H-NS, C-terminal domain | 0.50 | 44.0 | 3.74e-01 | 100.0% | 70.2% |
ECOD (22)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4950662 | 1056.1.1.1 ↗ | a+b two layers › tRNA pseudouridine synthase TruD insertion domain › tRNA pseudouridine synthase TruD insertion domain › tRNA pseudouridine synthase TruD insertion domain › TruD | 0.76 | 63.0 | 3.91e-01 | 100.0% | 16.2% |
| 5025086 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.70 | 59.0 | 5.17e-01 | 100.0% | 90.9% |
| 3959955 | 304.163.1.3 ↗ | a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain › PF31118 | 0.69 | 52.0 | 5.07e-01 | 100.0% | 91.1% |
| 4158495 | 821.1.1.1 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG | 0.69 | 55.0 | 4.26e-01 | 100.0% | 48.9% |
| 153859 | 379.1.1.0 ↗ | few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors | 0.68 | 57.0 | 4.90e-01 | 100.0% | 59.6% |
| 3400250 | 379.1.1.3 ↗ | few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors › Kazal_2 | 0.68 | 58.0 | 5.16e-01 | 100.0% | 68.0% |
| 3932124 | 5050.1.1.32 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Acatn | 0.68 | 54.0 | 3.28e-01 | 100.0% | 13.2% |
| 3839138 | 2004.1.1.36 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Dynamin_N | 0.66 | 51.0 | 3.13e-01 | 100.0% | 13.8% |
| 3407580 | 379.1.1.0 ↗ | few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors | 0.64 | 51.0 | 4.25e-01 | 100.0% | 47.1% |
| 3991455 | 822.2.1.1 ↗ | a+b two layers › GYF/BRK domain-like › BRK domain-like › BRK domain-like › BRK | 0.63 | 49.0 | 4.45e-01 | 100.0% | 65.5% |
| 3628468 | 822.1.1.1 ↗ | a+b two layers › GYF/BRK domain-like › GYF domain › GYF domain › GYF | 0.62 | 48.0 | 3.94e-01 | 100.0% | 57.3% |
| 3969006 | 3115.6.1.2 ↗ | a+b two layers › GP2-like › Bacterial RNA polymerase subunit epsilon › Bacterial RNA polymerase subunit epsilon › PF28597 | 0.61 | 49.0 | 4.63e-01 | 100.0% | 80.0% |
| 4330785 | 2003.1.1.20 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Epimerase | 0.61 | 52.0 | 2.99e-01 | 100.0% | 10.3% |
| 3940858 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.61 | 43.0 | 3.74e-01 | 100.0% | 44.3% |
| 4007508 | 3115.6.1.2 ↗ | a+b two layers › GP2-like › Bacterial RNA polymerase subunit epsilon › Bacterial RNA polymerase subunit epsilon › PF28597 | 0.61 | 48.0 | 4.43e-01 | 100.0% | 72.0% |
| 3780596 | 109.4.1.291 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PUF_NOP9 | 0.60 | 45.0 | 2.47e-01 | 85.3% | 9.3% |
| 3603150 | 2004.1.1.220 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SWI2_SNF2 | 0.58 | 48.0 | 2.98e-01 | 100.0% | 42.2% |
| 3988557 | 2003.1.5.12 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase | 0.58 | 45.0 | 2.78e-01 | 97.1% | 92.6% |
| 4004704 | 3115.6.1.2 ↗ | a+b two layers › GP2-like › Bacterial RNA polymerase subunit epsilon › Bacterial RNA polymerase subunit epsilon › PF28597 | 0.57 | 43.0 | 4.16e-01 | 100.0% | 91.1% |
| 3616325 | 7590.1.1.0 ↗ | a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs | 0.54 | 42.0 | 2.87e-01 | 100.0% | 100.0% |
| 3809581 | 325.1.6.4 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › PS_Dcarbxylase | 0.53 | 40.0 | 2.40e-01 | 85.3% | 53.8% |
| 3617550 | 4342.1.1.0 ↗ | alpha complex topology › Tex N-terminal region-like › Tex N-terminal region-like › Tex N-terminal region-like | 0.53 | 42.0 | 2.61e-01 | 91.2% | 54.8% |