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MT362618.1__QJT70455.1__X__00094
Bact-VirMT362618.1__QJT70455.1__X__00094
Identity
- Accession:
- MT362618 ↗
- Kingdom:
- phage
Quality
85.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-46
Domain cluster:
representative
CATH (39)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ccgA00 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.86 | 70.0 | 4.51e-01 | 90.9% | 21.2% |
| 2fu2A00 | 1.20.1440.50 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Ta0600-like | 0.79 | 63.0 | 5.20e-01 | 100.0% | 50.0% |
| 1ku9A02 | 1.10.287.450 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.78 | 65.0 | 5.88e-01 | 100.0% | 85.9% |
| 1z0jB00 | 4.10.860.20 | Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › Rabenosyn, Rab binding domain | 0.77 | 65.0 | 6.27e-01 | 100.0% | 88.2% |
| 1b06A01 | 1.10.287.990 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Fe,Mn superoxide dismutase (SOD) domain | 0.77 | 66.0 | 5.80e-01 | 100.0% | 73.1% |
| 2wmmA01 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.77 | 62.0 | 6.02e-01 | 90.9% | 100.0% |
| 1qsdA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.76 | 62.0 | 4.83e-01 | 95.5% | 42.2% |
| 6fakA01 | 1.10.246.10 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.75 | 53.0 | 4.09e-01 | 75.0% | 37.9% |
| 3rq9A00 | 1.10.287.2500 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.74 | 61.0 | 5.18e-01 | 97.7% | 78.2% |
| 2kp8A00 | 1.20.5.170 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.74 | 62.0 | 5.39e-01 | 100.0% | 68.1% |
| 1p49A02 | 1.10.287.550 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.72 | 62.0 | 5.68e-01 | 100.0% | 76.3% |
| 3pyoY00 | 1.10.287.310 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.71 | 58.0 | 5.26e-01 | 95.5% | 66.1% |
| 4nb5B02 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.71 | 59.0 | 5.32e-01 | 100.0% | 68.8% |
| 1vq8V00 | 1.10.287.310 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.70 | 60.0 | 5.37e-01 | 100.0% | 69.2% |
| 4cqiA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.70 | 62.0 | 4.67e-01 | 100.0% | 80.4% |
| 1op1A00 | 1.20.81.10 | Mainly Alpha › Up-down Bundle › Receptor-associated Protein › RAP domain | 0.70 | 56.0 | 4.73e-01 | 95.5% | 63.4% |
| 1b48A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.69 | 56.0 | 4.35e-01 | 100.0% | 43.1% |
| 2hh7A00 | 1.20.58.1000 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Metal-sensitive repressor, helix protomer | 0.68 | 54.0 | 4.63e-01 | 100.0% | 57.6% |
| 3ehfD01 | 1.20.5.1930 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.68 | 56.0 | 5.13e-01 | 100.0% | 81.0% |
| 2nn4A00 | 1.10.287.760 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YqgQ-like | 0.68 | 53.0 | 4.80e-01 | 88.6% | 64.5% |
| 4gouA01 | 1.10.167.10 | Mainly Alpha › Orthogonal Bundle › Regulator of G-protein Signalling 4; domain 2 › Regulator of G-protein Signalling 4, domain 2 | 0.68 | 55.0 | 3.89e-01 | 95.5% | 36.5% |
| 2om6A02 | 1.10.150.400 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.67 | 59.0 | 4.89e-01 | 100.0% | 69.6% |
| 2rp4A00 | 6.10.280.60 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Transcription factor p53, C-terminal domain | 0.67 | 55.0 | 4.83e-01 | 97.7% | 62.0% |
| 2qkdA02 | 2.60.120.1040 | Mainly Beta › Sandwich › Jelly Rolls › ZPR1, A/B domain | 0.67 | 53.0 | 3.86e-01 | 97.7% | 30.7% |
| 2rd0B00 | 1.10.287.1490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.67 | 55.0 | 3.96e-01 | 97.7% | 32.4% |
| 2y4tA02 | 1.10.287.110 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain | 0.66 | 52.0 | 5.03e-01 | 93.2% | 92.3% |
| 1w53A00 | 1.10.1240.30 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › KaiA/RbsU domain | 0.65 | 51.0 | 4.38e-01 | 100.0% | 96.4% |
| 2zxeA02 | 1.20.1110.10 | Mainly Alpha › Up-down Bundle › Calcium-transporting ATPase, transmembrane domain › Calcium-transporting ATPase, transmembrane domain | 0.65 | 51.0 | 3.03e-01 | 100.0% | 10.8% |
| 3u62A01 | 3.40.50.10860 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 | 0.64 | 45.0 | 3.28e-01 | 77.3% | 26.4% |
| 2e9fB01 | 1.10.275.10 | Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) | 0.63 | 55.0 | 4.32e-01 | 100.0% | 57.3% |
| 6mh4A03 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.62 | 50.0 | 4.12e-01 | 88.6% | 50.6% |
| 3bulA01 | 1.10.1240.10 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain | 0.61 | 50.0 | 4.18e-01 | 100.0% | 50.6% |
| 1whuA00 | 1.10.10.400 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Polyribonucleotide nucleotidyltransferase, RNA-binding domain | 0.61 | 45.0 | 3.58e-01 | 86.4% | 59.6% |
| 5jazA03 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.61 | 49.0 | 3.87e-01 | 88.6% | 44.0% |
| 3l8kA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.60 | 52.0 | 3.31e-01 | 100.0% | 87.6% |
| 3qxzA02 | 1.10.12.10 | Mainly Alpha › Orthogonal Bundle › Lyase 2-enoyl-coa Hydratase; Chain A, domain 2 › Lyase 2-enoyl-coa Hydratase, Chain A, domain 2 | 0.59 | 48.0 | 4.38e-01 | 100.0% | 66.7% |
| 3d5lA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 47.0 | 4.56e-01 | 93.2% | 90.4% |
| 2mpnA00 | 6.10.140.1340 | Special › Helix non-globular › Helix Hairpins › | 0.57 | 48.0 | 4.30e-01 | 100.0% | 73.5% |
| 1tfeA02 | 1.10.286.20 | Mainly Alpha › Orthogonal Bundle › GTP Cyclohydrolase I; Chain A, domain 1 › | 0.51 | 43.0 | 4.28e-01 | 88.6% | 97.8% |
ECOD (30)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4137277 | 4336.1.1.1 ↗ | alpha duplicates or obligate multimers › YheA/YmcA-like › YheA/YmcA-like › YheA/YmcA-like › Com_YlbF | 0.95 | 88.0 | 6.28e-01 | 100.0% | 38.3% |
| 3587855 | 192.8.1.0 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain | 0.88 | 77.0 | 7.45e-01 | 100.0% | 88.0% |
| 4980797 | 5059.1.1.1 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA | 0.83 | 74.0 | 5.03e-01 | 100.0% | 30.0% |
| 3287986 | 605.8.1.7 ↗ | alpha duplicates or obligate multimers › ROP-like › BAS1536-like › BAS1536-like › DUF6374 | 0.81 | 71.0 | 6.89e-01 | 100.0% | 90.0% |
| 3888160 | 192.4.1.0 ↗ | alpha bundles › Long alpha-hairpin › Ribosomal protein L29 (L29p) › Ribosomal protein L29 (L29p) | 0.79 | 64.0 | 6.41e-01 | 100.0% | 91.1% |
| 4216245 | 4082.1.1.1 ↗ | alpha duplicates or obligate multimers › Hairy Orange domain › Hairy Orange domain › Hairy Orange domain › Hairy_orange | 0.79 | 61.0 | 6.07e-01 | 84.1% | 91.1% |
| 3734641 | 3924.1.1.0 ↗ | alpha complex topology › Sterol uptake control protein 2 › Sterol uptake control protein 2 › Sterol uptake control protein 2 | 0.78 | 67.0 | 3.97e-01 | 100.0% | 13.1% |
| 3940115 | 604.29.1.1 ↗ | alpha bundles › Spectrin repeat-like › Trehalose-6-phosphate phosphatase N-terminal helical bundle › Trehalose-6-phosphate phosphatase N-terminal helical bundle › T6PP_N | 0.76 | 62.0 | 4.76e-01 | 100.0% | 38.3% |
| 3946910 | 3755.1.1.0 ↗ | alpha bundles › YscO-like › Putative type III secretion protein YscO-related › Putative type III secretion protein YscO-related | 0.76 | 63.0 | 4.21e-01 | 100.0% | 56.8% |
| 3381592 | 2486.1.1.6 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › ACCA | 0.76 | 67.0 | 3.96e-01 | 100.0% | 78.2% |
| 3945531 | 605.1.1.4 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA_3 | 0.75 | 66.0 | 5.66e-01 | 100.0% | 62.9% |
| 3331657 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.74 | 62.0 | 3.51e-01 | 100.0% | 8.8% |
| 4961031 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.74 | 64.0 | 5.53e-01 | 100.0% | 64.3% |
| 3570117 | 375.6.1.2 ↗ | few secondary structure elements › Rubredoxin-like › FlhC-like › FlhC-like › PF31275 | 0.73 | 60.0 | 5.36e-01 | 88.6% | 78.3% |
| 3493322 | 2006.1.1.8 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › 5_nucleotid | 0.73 | 62.0 | 3.89e-01 | 100.0% | 22.1% |
| 3384920 | 4146.1.1.0 ↗ | alpha bundles › YqgQ-like › YqgQ-like › YqgQ-like | 0.72 | 57.0 | 5.89e-01 | 90.9% | 100.0% |
| 5065059 | 604.5.1.0 ↗ | alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) | 0.72 | 62.0 | 5.53e-01 | 100.0% | 67.7% |
| 1296342 | 101.1.2.456 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_MmpR5 | 0.71 | 58.0 | 4.16e-01 | 100.0% | 32.0% |
| 3372432 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.71 | 59.0 | 5.00e-01 | 100.0% | 55.0% |
| 3873779 | 2004.1.1.463 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin, Kinesin_assoc, Microtub_bd | 0.70 | 56.0 | 3.32e-01 | 100.0% | 11.0% |
| 4005270 | 3718.1.1.15 ↗ | alpha bundles › Flagellar protein fliT › Flagellar protein fliT › Flagellar protein fliT › COX4_pro | 0.70 | 56.0 | 4.35e-01 | 88.6% | 60.0% |
| 4406905 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.69 | 59.0 | 5.15e-01 | 100.0% | 64.3% |
| 3718909 | 4009.1.1.0 ↗ | alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins | 0.68 | 56.0 | 4.23e-01 | 88.6% | 40.0% |
| 4107135 | 547.1.1.1 ↗ | alpha duplicates or obligate multimers › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › GlutR_dimer | 0.67 | 54.0 | 4.15e-01 | 88.6% | 41.0% |
| 3334749 | 544.1.1.0 ↗ | alpha bundles › Functional domain of the splicing factor Prp18 › Functional domain of the splicing factor Prp18 › Functional domain of the splicing factor Prp18 | 0.67 | 54.0 | 4.00e-01 | 100.0% | 77.9% |
| 3735607 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.63 | 54.0 | 4.53e-01 | 100.0% | 60.0% |
| 3700089 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.63 | 54.0 | 4.81e-01 | 100.0% | 70.8% |
| 4275352 | 166.1.1.1 ↗ | alpha superhelices › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › DXPR_C | 0.61 | 49.0 | 3.83e-01 | 88.6% | 43.2% |
| 3841941 | 7512.1.1.4 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_10 | 0.60 | 44.0 | 2.87e-01 | 97.7% | 15.5% |
| 3494616 | 4106.1.1.1 ↗ | few secondary structure elements › Zinc hairpin stack › Zinc hairpin stack › Zinc hairpin stack › DHHC | 0.59 | 47.0 | 4.01e-01 | 100.0% | 52.9% |