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MT362618.1__QJT70459.1__X__00098

Bact-Vir

MT362618.1__QJT70459.1__X__00098

Identity

Accession:
MT362618 ↗
Kingdom:
phage

Quality

77.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-37
PDB
Domain cluster: representative
CATH (53)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4wksC02 2.30.120.10 Mainly Beta › Roll › Penicillin G acylase, beta-roll domain › Aminohydrolase, N-terminal nucleophile (Ntn) domain, beta-sheet knob region 0.78 55.0 4.37e-01 75.7% 37.3%
6nvxB02 2.30.120.10 Mainly Beta › Roll › Penicillin G acylase, beta-roll domain › Aminohydrolase, N-terminal nucleophile (Ntn) domain, beta-sheet knob region 0.77 54.0 4.30e-01 75.7% 36.4%
4yfbC02 2.30.120.10 Mainly Beta › Roll › Penicillin G acylase, beta-roll domain › Aminohydrolase, N-terminal nucleophile (Ntn) domain, beta-sheet knob region 0.77 54.0 4.28e-01 75.7% 35.9%
2v79A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 53.0 3.72e-01 78.4% 68.7%
5c7qB00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.73 51.0 3.27e-01 75.7% 57.2%
4zg5A00 3.40.1210.10 Alpha Beta › 3-Layer(aba) Sandwich › Stationary-phase Survival Protein Sure Homolog; Chain: A, › Survival protein SurE-like phosphatase/nucleotidase 0.73 52.0 3.14e-01 75.7% 11.7%
5w8mA00 3.60.21.10 Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases 0.72 49.0 3.10e-01 75.7% 13.8%
1vhzA01 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.72 49.0 3.15e-01 78.4% 15.2%
3tcaA01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.71 54.0 4.15e-01 86.5% 87.8%
5odnC00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.70 47.0 3.45e-01 70.3% 84.3%
2ab5B01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.70 48.0 3.35e-01 73.0% 21.1%
4lduA03 2.30.30.1040 Mainly Beta › Roll › SH3 type barrels. › 0.70 55.0 4.54e-01 89.2% 91.2%
1fm2B03 2.30.120.10 Mainly Beta › Roll › Penicillin G acylase, beta-roll domain › Aminohydrolase, N-terminal nucleophile (Ntn) domain, beta-sheet knob region 0.70 49.0 4.12e-01 75.7% 42.4%
4gs5A01 3.40.50.12780 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain 0.69 53.0 3.26e-01 89.2% 37.7%
2byvE05 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.69 51.0 4.18e-01 86.5% 86.1%
2y3aA01 3.10.20.770 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.69 52.0 3.16e-01 89.2% 30.0%
3iuzA00 3.10.180.50 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 0.68 48.0 2.82e-01 75.7% 15.9%
3es1A01 2.20.70.150 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › 0.68 45.0 4.59e-01 70.3% 83.8%
1se8A02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.67 55.0 4.05e-01 100.0% 72.1%
1e5tA01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.67 54.0 3.14e-01 94.6% 31.9%
1gcbA01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.66 45.0 2.60e-01 70.3% 6.5%
2vw9B00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.66 52.0 3.91e-01 94.6% 47.6%
1tg0A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.66 47.0 4.05e-01 89.2% 45.5%
1y96A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.65 51.0 4.01e-01 91.9% 81.4%
3gqhA02 4.10.80.40 Few Secondary Structures › Irregular › Rhinovirus 14, subunit 4 › succinate dehydrogenase protein domain 0.64 43.0 4.29e-01 70.3% 87.5%
2h7fX02 3.90.15.10 Alpha Beta › Alpha-Beta Complex › Topoisomerase I; Chain A, domain 3 › Topoisomerase I; Chain A, domain 3 0.64 47.0 2.96e-01 86.5% 16.6%
1dw9A02 3.30.1160.10 Alpha Beta › 2-Layer Sandwich › Cyanate Lyase; Chain: A, domain 2 › Cyanate lyase, C-terminal domain 0.63 43.0 3.58e-01 70.3% 36.8%
5ib9A01 3.40.630.10 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases 0.63 48.0 2.94e-01 94.6% 60.4%
1s3rA04 2.60.40.1430 Mainly Beta › Sandwich › Immunoglobulin-like › Perfringolysin, domain 4 0.63 52.0 3.81e-01 97.3% 40.5%
7sxqA01 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.62 47.0 2.93e-01 86.5% 81.0%
2f1eA00 2.60.40.1470 Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain 0.62 43.0 3.09e-01 73.0% 22.4%
2jkgA00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.62 47.0 3.13e-01 86.5% 42.4%
7r5mA01 3.30.559.10 Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain 0.61 45.0 2.85e-01 86.5% 34.1%
4qqgG00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.61 45.0 3.75e-01 83.8% 65.3%
2peeB02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.61 44.0 3.18e-01 81.1% 79.4%
2bhkA00 2.10.90.10 Mainly Beta › Ribbon › Cystine Knot Cytokines, subunit B › Cystine-knot cytokines 0.60 41.0 3.15e-01 75.7% 50.5%
2k5qA00 2.40.50.480 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Protein of unknown function DUF1093 0.59 45.0 3.53e-01 100.0% 34.3%
6z9cA01 2.60.40.1470 Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain 0.59 45.0 3.32e-01 94.6% 77.9%
2py5A05 4.10.80.20 Few Secondary Structures › Irregular › Rhinovirus 14, subunit 4 › DNA polymerase; domain 5 0.58 39.0 4.05e-01 70.3% 83.3%
1ilvA00 3.40.1210.10 Alpha Beta › 3-Layer(aba) Sandwich › Stationary-phase Survival Protein Sure Homolog; Chain: A, › Survival protein SurE-like phosphatase/nucleotidase 0.58 42.0 2.61e-01 75.7% 11.8%
4v19W00 3.90.470.10 Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › Ribosomal protein L22/L17 0.58 40.0 2.75e-01 75.7% 73.5%
4gs5A02 3.30.300.30 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain 0.58 43.0 3.36e-01 94.6% 73.3%
3u83A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 40.0 3.02e-01 73.0% 51.5%
5lp7E01 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.58 41.0 2.61e-01 73.0% 30.5%
3n77A00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.57 44.0 3.08e-01 89.2% 43.3%
5xc5A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.56 41.0 2.82e-01 83.8% 71.9%
5mz2I00 3.30.190.10 Alpha Beta › 2-Layer Sandwich › Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase › Ribulose bisphosphate carboxylase, small subunit 0.56 41.0 2.89e-01 81.1% 40.3%
1uzxA00 3.10.110.10 Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme 0.55 41.0 3.01e-01 91.9% 64.3%
4jdeA01 2.60.40.3820 Mainly Beta › Sandwich › Immunoglobulin-like › 0.55 38.0 2.77e-01 78.4% 95.6%
1dfaA01 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.54 39.0 2.47e-01 78.4% 12.9%
1vwxP00 3.90.470.10 Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › Ribosomal protein L22/L17 0.53 37.0 2.58e-01 73.0% 91.5%
1p1hB01 3.30.2360.10 Alpha Beta › 2-Layer Sandwich › Glyceraldehyde-3-phosphate dehydrogenase-like fold › Glyceraldehyde-3-phosphate dehydrogenase-like domain 0.52 41.0 2.78e-01 100.0% 74.4%
1pu1A00 3.30.300.100 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › MTH677-like 0.50 34.0 2.71e-01 73.0% 27.5%
ECOD (48)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3523606 5001.1.1.1 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 0.78 55.0 3.13e-01 75.7% 7.4%
3700547 109.4.1.22 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Adaptin_N 0.78 54.0 2.95e-01 75.7% 4.3%
4159776 3294.1.1.1 alpha complex topology › FAS type I helical domain › FAS type I helical domain › FAS type I helical domain › FAS_I_H 0.77 53.0 3.20e-01 73.0% 11.5%
4449325 387.1.1.24 few secondary structure elements › omega toxin-like › omega toxin-related › omega toxin-related › Toxin_35 0.76 53.0 4.98e-01 75.7% 60.0%
5045478 7527.1.1.1 a/b three-layered sandwiches › SurE-like/CoA-transferase family III (CaiB/BaiF) › SurE-like/CoA-transferase family III (CaiB/BaiF) › SurE-like/CoA-transferase family III (CaiB/BaiF) › SurE 0.75 53.0 3.19e-01 75.7% 11.8%
4160831 109.4.1.1255 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Adaptin_N, Cnd1 0.74 52.0 2.82e-01 75.7% 4.0%
4245831 1.1.2.6 beta barrels › cradle loop barrel › RIFT-related › double psi › Asp_decarbox 0.74 52.0 3.50e-01 73.0% 22.1%
3476644 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.74 51.0 5.06e-01 73.0% 67.5%
3697137 5050.1.1.1 alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Sugar_tr 0.73 51.0 3.10e-01 73.0% 12.5%
3516513 109.2.1.0 alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid 0.72 50.0 2.70e-01 73.0% 3.5%
4012111 812.2.1.0 a+b duplicates or obligate multimers › MinE-like › Cyanase C-terminal domain › Cyanase C-terminal domain 0.72 48.0 4.05e-01 70.3% 39.7%
3709549 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.71 56.0 3.73e-01 94.6% 53.3%
3938317 389.1.1.0 few secondary structure elements › EGF-like › EGF-related › EGF/Laminin 0.71 47.0 4.60e-01 70.3% 60.0%
4616697 7527.1.1.1 a/b three-layered sandwiches › SurE-like/CoA-transferase family III (CaiB/BaiF) › SurE-like/CoA-transferase family III (CaiB/BaiF) › SurE-like/CoA-transferase family III (CaiB/BaiF) › SurE 0.71 51.0 3.05e-01 75.7% 11.5%
3743393 59.1.4.2 beta complex topology › triple barrel › triple barrel › TFIID subunits TAF1-TAF7 › DUF3591 0.70 56.0 3.17e-01 86.5% 9.9%
3456292 2.1.1.134 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › GIDE 0.70 49.0 3.32e-01 75.7% 19.3%
4315154 3294.1.1.1 alpha complex topology › FAS type I helical domain › FAS type I helical domain › FAS type I helical domain › FAS_I_H 0.70 51.0 3.20e-01 81.1% 14.6%
3890428 109.3.1.96 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank+Ank_2+Ank_4 0.69 52.0 3.36e-01 86.5% 17.2%
3303587 207.1.1.55 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1,LRR_8 0.69 47.0 2.80e-01 70.3% 9.8%
3534588 2004.1.1.30 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C 0.68 47.0 2.88e-01 73.0% 10.8%
3591474 4106.1.1.1 few secondary structure elements › Zinc hairpin stack › Zinc hairpin stack › Zinc hairpin stack › DHHC 0.68 55.0 3.47e-01 97.3% 30.9%
3614862 4015.1.1.1 alpha complex topology › alpha-helical domain in sec1/munc18-like (SM) proteins › alpha-helical domain in sec1/munc18-like (SM) proteins › alpha-helical domain in sec1/munc18-like (SM) proteins › Sec1 0.67 52.0 3.21e-01 86.5% 42.2%
4968420 7512.1.1.0 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase 0.67 45.0 2.80e-01 70.3% 11.7%
4045000 7527.1.1.1 a/b three-layered sandwiches › SurE-like/CoA-transferase family III (CaiB/BaiF) › SurE-like/CoA-transferase family III (CaiB/BaiF) › SurE-like/CoA-transferase family III (CaiB/BaiF) › SurE 0.67 47.0 2.89e-01 75.7% 11.5%
4028937 109.4.1.1255 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Adaptin_N, Cnd1 0.66 45.0 2.42e-01 70.3% 3.5%
3798928 59.1.4.2 beta complex topology › triple barrel › triple barrel › TFIID subunits TAF1-TAF7 › DUF3591 0.66 45.0 2.53e-01 70.3% 7.1%
3993371 2485.1.1.45 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin_8 0.66 54.0 3.52e-01 91.9% 58.2%
3685962 219.1.1.41 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C78 0.66 52.0 3.14e-01 91.9% 85.0%
3589882 4325.1.1.7 mixed a+b and a/b › YegP-like › YegP-like › YegP-like › Arm-DNA-bind_4 0.65 50.0 4.64e-01 89.2% 84.0%
4262649 812.2.1.1 a+b duplicates or obligate multimers › MinE-like › Cyanase C-terminal domain › Cyanase C-terminal domain › Cyanate_lyase 0.64 42.0 3.40e-01 70.3% 31.2%
3810414 812.2.1.1 a+b duplicates or obligate multimers › MinE-like › Cyanase C-terminal domain › Cyanase C-terminal domain › Cyanate_lyase 0.64 42.0 3.40e-01 70.3% 31.2%
3593808 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.64 47.0 3.68e-01 91.9% 44.0%
3734205 145.1.1.0 alpha arrays › F-box domain › F-box domain › F-box domain 0.64 45.0 2.93e-01 75.7% 98.9%
3288067 3326.1.1.1 alpha arrays › DNA-binding domain in UvrA › DNA-binding domain in UvrA › DNA-binding domain in UvrA › UvrA_DNA-bind 0.64 43.0 3.13e-01 70.3% 22.7%
3270195 221.1.1.76 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA_2 0.63 50.0 3.68e-01 94.6% 79.1%
7696 812.2.1.1 a+b duplicates or obligate multimers › MinE-like › Cyanase C-terminal domain › Cyanase C-terminal domain › Cyanate_lyase 0.63 43.0 3.55e-01 70.3% 35.7%
4089268 325.1.7.0 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.62 43.0 3.38e-01 78.4% 43.3%
3450430 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.62 46.0 3.06e-01 86.5% 70.3%
3972588 2498.1.1.31 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M90 0.61 53.0 3.23e-01 97.3% 42.9%
3463023 4987.1.1.0 few secondary structure elements › Ribosomal protein L31p › Ribosomal protein L31p › Ribosomal protein L31p 0.61 49.0 4.88e-01 94.6% 85.0%
4315296 5054.1.1.7 alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › KdpA 0.60 41.0 2.91e-01 70.3% 20.0%
3351840 284.1.3.2 a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › OSR1_C 0.60 45.0 3.88e-01 89.2% 84.1%
3964735 2.9.1.1 beta barrels › OB-fold › RNB domain-like › RNB domain-like › RNB 0.59 48.0 2.80e-01 97.3% 34.3%
3231765 64.1.1.19 beta meanders › WW domain-like › WW domain › WW domain › FBA_2 0.59 44.0 3.25e-01 86.5% 40.0%
4034091 4325.1.1.7 mixed a+b and a/b › YegP-like › YegP-like › YegP-like › Arm-DNA-bind_4 0.59 44.0 4.15e-01 91.9% 78.0%
5011151 319.1.1.1 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.58 43.0 2.94e-01 83.8% 36.9%
4134015 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.58 42.0 2.91e-01 86.5% 25.2%
4890002 2003.1.5.81 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 0.53 38.0 2.49e-01 70.3% 13.1%