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MT366580.1__QJT70755.1__X__00017

Bact-Vir

MT366580.1__QJT70755.1__X__00017

Identity

Accession:
MT366580 ↗
Kingdom:
phage

Quality

76.9 mean pLDDT

Taxonomy

TaxID: 2736205

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 6-56
PDB
Domain cluster: representative
CATH (21)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2f2gA00 1.20.910.10 Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like 0.83 45.0 2.89e-01 82.4% 12.6%
3fxqB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 40.0 3.31e-01 84.3% 31.1%
2fsjA02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.69 38.0 2.70e-01 78.4% 18.8%
4n06A02 1.20.120.920 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CRISPR-associated endonuclease Cas1, C-terminal domain 0.69 46.0 2.91e-01 96.1% 13.3%
3nv0B00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.64 48.0 3.54e-01 82.4% 41.9%
6tqfA01 1.20.1560.10 Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain 0.62 45.0 2.73e-01 100.0% 10.5%
5i0hA02 1.20.5.4820 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.62 41.0 3.74e-01 70.6% 98.6%
1lnwF01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 42.0 3.17e-01 72.5% 74.2%
4akgA01 1.20.1050.130 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.62 43.0 2.91e-01 76.5% 54.8%
1aorA03 1.10.599.10 Mainly Alpha › Orthogonal Bundle › Aldehyde Ferredoxin Oxidoreductase Protein, subunit A; domain 3 › Aldehyde Ferredoxin Oxidoreductase Protein, subunit A, domain 3 0.61 41.0 2.78e-01 70.6% 33.8%
2qubA01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.58 44.0 2.73e-01 82.4% 36.8%
2bgcA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 39.0 3.10e-01 70.6% 94.1%
4yk8B00 3.30.900.10 Alpha Beta › 2-Layer Sandwich › Cell Cycle, Spindle Assembly Checkpoint Protein; Chain A › HORMA domain 0.57 51.0 3.41e-01 100.0% 80.9%
4l80D00 3.20.20.60 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains 0.55 37.0 2.28e-01 98.0% 10.5%
5hmpB02 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.55 37.0 3.49e-01 70.6% 100.0%
3k8pC01 1.20.58.1440 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.55 46.0 3.70e-01 94.1% 87.6%
1akoA00 3.60.10.10 Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase 0.53 43.0 2.84e-01 100.0% 56.3%
3cvvA02 1.25.40.80 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.53 39.0 2.96e-01 80.4% 51.9%
1pp0B00 3.40.198.10 Alpha Beta › 3-Layer(aba) Sandwich › Delta-endotoxin CytB › Delta-endotoxin CytB-like 0.53 39.0 2.64e-01 78.4% 40.2%
8dgfB01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.50 44.0 2.99e-01 100.0% 97.9%
3ic4A00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.50 36.0 2.89e-01 80.4% 41.3%
ECOD (22)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5042137 244.3.1.6 a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › TSCPD 0.82 44.0 3.30e-01 86.3% 22.5%
3740653 5001.1.1.87 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › EXS 0.76 50.0 3.15e-01 98.0% 13.0%
3670166 5051.1.1.6 alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Aa_trans 0.73 49.0 2.87e-01 100.0% 8.6%
4003733 5054.1.1.8 alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 0.70 47.0 2.89e-01 100.0% 10.9%
3596821 4268.2.1.0 alpha duplicates or obligate multimers › EspA/CesA-like › EspA chaperone CesA › EspA chaperone CesA 0.66 44.0 3.45e-01 100.0% 30.4%
3915807 5054.1.1.8 alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 0.64 57.0 3.45e-01 100.0% 54.4%
3261667 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.63 42.0 2.49e-01 70.6% 20.4%
3628456 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.63 43.0 3.31e-01 100.0% 28.9%
4028685 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.62 44.0 3.47e-01 74.5% 38.2%
3955641 101.1.2.734 alpha arrays › HTH › HTH › winged helix domain › AbiEi_2 0.58 32.0 2.70e-01 78.4% 28.2%
3949649 3646.1.1.1 alpha complex topology › T-component of energy-coupling factor (ECF) transporters › T-component of energy-coupling factor (ECF) transporters › T-component of energy-coupling factor (ECF) transporters › CbiQ 0.58 38.0 2.50e-01 100.0% 13.3%
4014236 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.58 41.0 3.03e-01 74.5% 62.4%
4243795 244.4.1.1 a+b two layers › FAD-linked reductases, C-terminal domain-like › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › Complex1_49kDa 0.57 41.0 2.91e-01 74.5% 69.3%
3424794 301.2.1.4 a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › FGAR-AT_linker 0.56 45.0 2.81e-01 86.3% 44.7%
4454324 101.1.2.55 alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB 0.56 49.0 3.99e-01 100.0% 87.0%
5080196 5081.1.1.1 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid 0.54 44.0 3.03e-01 100.0% 79.5%
5012802 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.54 40.0 3.29e-01 88.2% 42.1%
4939717 3758.2.1.1 alpha bundles › Bacterial hemolysins-like › Biopolymer transport protein ExbB › Biopolymer transport protein ExbB › MotA_ExbB 0.54 47.0 3.19e-01 100.0% 40.4%
3284679 243.1.1.80 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › PF26580 0.53 38.0 3.00e-01 76.5% 37.4%
3241792 5001.1.1.66 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Srg 0.51 45.0 2.94e-01 96.1% 57.1%
5011076 2006.1.1.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like 0.51 34.0 2.72e-01 70.6% 73.0%
3384625 148.1.3.207 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › DUF7751 0.50 33.0 3.18e-01 70.6% 93.8%
D2 medium residues 289-367
PDB
Domain cluster: representative
CATH (27)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1uypA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.67 55.0 3.69e-01 91.1% 24.7%
7k7jA02 2.60.40.1770 Mainly Beta › Sandwich › Immunoglobulin-like › ephrin a2 ectodomain 0.60 39.0 4.20e-01 81.0% 83.9%
6qp9B01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.59 50.0 3.15e-01 97.5% 27.1%
4h5iB00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.58 43.0 2.88e-01 91.1% 18.6%
3f6gA02 3.30.160.340 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.58 41.0 4.52e-01 78.5% 95.2%
5dvyA01 3.10.450.100 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › NTF2-like; domain 1 0.57 43.0 3.72e-01 89.9% 50.8%
3mswA00 2.40.128.720 Mainly Beta › Beta Barrel › Lipocalin › 0.57 41.0 3.48e-01 87.3% 43.9%
2lexA00 2.20.25.80 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › WRKY domain 0.57 40.0 4.34e-01 89.9% 92.1%
2fkcA01 3.40.1350.40 Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › 0.57 39.0 3.48e-01 70.9% 63.6%
1t17A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.57 43.0 3.49e-01 81.0% 58.1%
1sr9A02 3.30.160.270 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Alpha-isopropylmalate synthase LeuA, regulatory domain 0.55 45.0 3.53e-01 87.3% 68.9%
4lgqA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.54 45.0 3.84e-01 93.7% 60.9%
3hduA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.54 37.0 3.01e-01 70.9% 65.1%
4dduA07 2.60.510.20 Mainly Beta › Sandwich › EV matrix protein fold › 0.54 38.0 3.53e-01 75.9% 79.4%
3kyaA02 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.54 40.0 2.71e-01 84.8% 31.9%
1xdnA02 3.30.470.30 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme 0.54 40.0 3.22e-01 78.5% 97.4%
2lqvA00 3.10.450.300 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › YebF/Colicin-M immunity protein 0.53 38.0 3.56e-01 75.9% 68.7%
2hdlA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.53 34.0 3.49e-01 70.9% 67.5%
3q39B02 2.40.30.120 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Positive stranded ssRNA viruses 0.51 40.0 3.67e-01 87.3% 76.4%
2epbA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.51 32.0 3.37e-01 75.9% 72.1%
1twfB04 3.90.1110.10 Alpha Beta › Alpha-Beta Complex › Dna-directed Rna Polymerase Ii 140kd Polypeptide; Chain: B; domain 3 › RNA polymerase Rpb2, domain 2 0.51 39.0 3.07e-01 84.8% 52.5%
2i99A01 3.30.1780.10 Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 0.51 42.0 3.48e-01 93.7% 58.7%
3lq6A02 2.40.30.120 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Positive stranded ssRNA viruses 0.51 39.0 3.49e-01 83.5% 75.4%
2yh9B00 3.30.1450.10 Alpha Beta › 2-Layer Sandwich › Beta-lactamase Inhibitory Protein; Chain:B, domain 1 › 0.50 29.0 3.12e-01 72.2% 64.7%
3rbyA02 2.40.128.310 Mainly Beta › Beta Barrel › Lipocalin › Protein HRI1, C-terminal domain 0.50 32.0 3.05e-01 86.1% 51.6%
3fruA01 3.30.500.10 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like 0.50 40.0 3.11e-01 87.3% 86.4%
1x47A01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.50 37.0 3.66e-01 79.7% 74.7%
ECOD (21)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4955261 5.1.2.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed 0.91 77.0 4.94e-01 96.2% 22.3%
5057420 5.1.2.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed 0.79 72.0 4.68e-01 96.2% 30.7%
5080416 5.1.2.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed 0.76 55.0 3.68e-01 88.6% 20.7%
4608520 5.1.7.2 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 10-bladed › Sortilin-Vps10 0.67 50.0 2.81e-01 79.7% 11.6%
3189324 375.1.1.319 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Saf4_Yju2 0.62 42.0 4.47e-01 91.1% 81.4%
3996555 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.60 39.0 3.75e-01 77.2% 55.8%
4000402 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.60 37.0 3.42e-01 70.9% 46.7%
5041112 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.58 38.0 4.03e-01 72.2% 77.1%
3488139 2003.1.5.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.57 45.0 3.39e-01 88.6% 66.0%
4393617 330.6.1.1 a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.57 42.0 3.62e-01 79.7% 90.8%
4030981 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.56 37.0 3.75e-01 72.2% 67.5%
4837843 12.3.1.0 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.56 38.0 4.13e-01 78.5% 87.3%
3615185 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.56 48.0 3.03e-01 93.7% 31.3%
4984268 220.1.1.76 beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_2 0.56 38.0 3.55e-01 72.2% 56.0%
3484954 2003.1.5.73 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_16 0.56 43.0 3.06e-01 87.3% 51.6%
3489888 881.1.1.2 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1 0.55 44.0 3.54e-01 88.6% 65.6%
5078629 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.54 37.0 3.38e-01 70.9% 54.1%
4017305 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.53 44.0 3.01e-01 92.4% 28.7%
5044311 304.136.1.0 a+b two layers › Alpha-beta plaits › Oligo-peptide binding protein (OPPA) insertion domain › Oligo-peptide binding protein (OPPA) insertion domain 0.51 38.0 3.25e-01 81.0% 81.5%
4065005 881.1.1.34 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PF27181 0.51 42.0 3.23e-01 93.7% 73.8%
4979002 220.1.1.76 beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_2 0.51 35.0 3.23e-01 72.2% 56.2%
D3 medium residues 424-492
PDB
Domain cluster: representative
CATH (65)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4i3gA04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.70 50.0 4.19e-01 75.4% 86.0%
1uebA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.67 47.0 4.88e-01 92.8% 79.4%
3nqzA01 3.10.450.490 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.65 47.0 4.30e-01 97.1% 58.2%
5c0pA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.65 59.0 3.86e-01 100.0% 49.3%
3gzrB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.63 55.0 4.36e-01 97.1% 77.3%
5bkaE01 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.63 56.0 4.47e-01 97.1% 84.1%
8gn6A01 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.63 57.0 3.58e-01 100.0% 35.2%
4gioA00 2.60.40.3230 Mainly Beta › Sandwich › Immunoglobulin-like › 0.62 51.0 4.61e-01 91.3% 91.7%
3p2nB02 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.62 57.0 3.59e-01 100.0% 40.7%
5dvyA01 3.10.450.100 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › NTF2-like; domain 1 0.62 55.0 4.49e-01 98.6% 79.4%
2owpA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.62 48.0 3.92e-01 97.1% 45.0%
1vqqA01 3.10.450.100 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › NTF2-like; domain 1 0.61 55.0 4.75e-01 100.0% 89.9%
2qkdA01 2.20.25.420 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ZPR1, zinc finger domain 0.61 40.0 4.65e-01 71.0% 95.8%
3esiA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.61 54.0 4.48e-01 100.0% 92.7%
6nobA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.61 55.0 3.40e-01 100.0% 24.3%
3rbyA01 2.40.128.320 Mainly Beta › Beta Barrel › Lipocalin › Protein HRI1, N-terminal domain 0.61 48.0 3.65e-01 85.5% 38.7%
4en2A02 2.60.40.1170 Mainly Beta › Sandwich › Immunoglobulin-like › Mu homology domain, subdomain B 0.60 44.0 3.92e-01 79.7% 89.4%
2vzsA05 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 49.0 4.39e-01 91.3% 86.1%
4bg7A00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.60 42.0 3.75e-01 97.1% 52.0%
1ar0A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.60 53.0 4.30e-01 97.1% 78.4%
3en2A00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.59 53.0 4.78e-01 97.1% 83.5%
3wasA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.59 52.0 3.26e-01 98.6% 36.0%
3a76A01 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.59 52.0 4.11e-01 97.1% 77.7%
1jb7A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.59 53.0 3.94e-01 100.0% 47.7%
3bm4A00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.59 48.0 3.44e-01 88.4% 64.5%
2vw9B00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.59 54.0 4.64e-01 100.0% 86.7%
4kwyA00 3.30.160.150 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain 0.59 51.0 4.11e-01 98.6% 80.3%
1se8A02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.59 52.0 4.42e-01 97.1% 75.7%
1uapA00 2.40.50.120 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.59 51.0 4.15e-01 97.1% 55.0%
3f9sB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.59 50.0 4.09e-01 100.0% 51.1%
5c7qB00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.58 48.0 3.54e-01 89.9% 65.0%
3ef8A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.58 52.0 4.03e-01 98.6% 81.1%
3fsdA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.58 53.0 4.35e-01 100.0% 84.3%
2ckfB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.58 52.0 3.90e-01 100.0% 86.5%
5tgnA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.58 42.0 3.69e-01 97.1% 49.5%
2cdqA03 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.58 41.0 3.91e-01 75.4% 83.3%
4kcaA02 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.58 52.0 3.21e-01 100.0% 20.9%
2w38A01 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.58 49.0 3.23e-01 97.1% 25.7%
4l8oA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.58 52.0 3.95e-01 100.0% 64.6%
2d5wA02 3.90.76.10 Alpha Beta › Alpha-Beta Complex › Dipeptide-binding Protein; domain 1 › Dipeptide-binding Protein; Domain 1 0.58 48.0 4.14e-01 95.7% 95.7%
4khbC00 2.30.29.210 Mainly Beta › Roll › PH-domain like › FACT complex subunit Spt16p/Cdc68p 0.58 41.0 3.60e-01 78.3% 49.1%
3daaA01 3.30.470.10 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › Aminotransferase class 4, branched-chain amino acid transferase, N-terminal domain 0.58 41.0 3.46e-01 73.9% 80.5%
3q90B00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.58 50.0 4.08e-01 97.1% 76.2%
1ms9A01 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.58 52.0 3.26e-01 100.0% 35.0%
3b8lA01 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.58 52.0 4.08e-01 100.0% 75.9%
3ebyA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.57 50.0 3.87e-01 97.1% 79.1%
4boeA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.57 46.0 3.62e-01 97.1% 40.9%
2j0wA03 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.57 40.0 3.83e-01 73.9% 84.0%
5jpnC02 2.40.50.120 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.57 47.0 3.73e-01 97.1% 47.1%
6fexA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.56 47.0 4.32e-01 100.0% 96.0%
5azpA02 2.20.200.10 Mainly Beta › Single Sheet › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) 0.56 39.0 3.75e-01 73.9% 81.5%
4fekB00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.56 44.0 3.16e-01 92.8% 89.9%
3e99A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.55 49.0 3.84e-01 100.0% 87.2%
1wuoA00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.55 46.0 3.28e-01 94.2% 88.6%
5ds1A00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.55 39.0 3.56e-01 73.9% 78.3%
2iqiB00 3.40.50.10610 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ABC-type transport auxiliary lipoprotein component 0.54 45.0 3.46e-01 95.7% 77.8%
6c98A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 42.0 3.91e-01 89.9% 83.5%
3m9qA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.53 40.0 3.97e-01 92.8% 77.8%
2f86B00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 48.0 3.89e-01 100.0% 81.4%
4mt4A00 1.20.1600.10 Mainly Alpha › Up-down Bundle › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) 0.52 36.0 2.25e-01 73.9% 51.7%
1jsgA00 2.40.15.10 Mainly Beta › Beta Barrel › Proto-oncogene - Oncogene Product P14tcl1 › TCL1/MTCP1 0.52 41.0 3.48e-01 85.5% 78.4%
4nzrM02 2.160.20.180 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.51 44.0 3.31e-01 100.0% 51.1%
8jx6A02 2.30.30.780 Mainly Beta › Roll › SH3 type barrels. › 0.51 42.0 3.69e-01 91.3% 99.0%
1azwA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.50 43.0 2.83e-01 98.6% 35.5%
6secA03 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.50 42.0 2.90e-01 100.0% 87.0%
ECOD (71)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4929284 4081.1.1.0 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related 0.74 55.0 4.22e-01 78.3% 68.7%
3716676 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.73 55.0 4.24e-01 79.7% 51.0%
3933099 330.2.1.0 a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) 0.70 60.0 5.57e-01 97.1% 75.3%
1837346 11.1.1.182 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Fn3-like 0.69 52.0 4.38e-01 81.2% 87.2%
4940712 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.67 57.0 4.38e-01 95.7% 62.5%
4609098 330.6.1.1 a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.66 50.0 3.99e-01 98.6% 40.7%
4927140 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.66 56.0 5.01e-01 92.8% 95.8%
3192331 7579.1.1.6 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_1 0.66 59.0 3.52e-01 100.0% 22.5%
3262642 11.1.1.793 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7743 0.65 48.0 4.32e-01 78.3% 71.6%
4012249 2007.1.4.2 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Phosphofructokinase N-terminal domain › DAGK_cat 0.65 45.0 3.08e-01 72.5% 22.0%
3272568 11.1.1.793 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7743 0.65 55.0 4.69e-01 92.8% 67.3%
3277271 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.64 54.0 4.62e-01 92.8% 70.0%
3390126 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.64 46.0 4.11e-01 75.4% 88.4%
3257734 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.63 54.0 4.72e-01 92.8% 84.0%
3258219 11.1.1.793 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7743 0.63 53.0 4.65e-01 91.3% 73.0%
134562 243.1.1.28 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF4440 0.63 55.0 4.32e-01 97.1% 76.2%
3653604 330.6.1.1 a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.62 55.0 4.21e-01 97.1% 63.2%
3247863 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.62 53.0 4.73e-01 92.8% 74.7%
3260841 11.1.3.9 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Cu,Zn superoxide dismutase-like › DUF7743 0.62 52.0 4.66e-01 91.3% 82.1%
5039064 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.62 48.0 2.98e-01 97.1% 14.8%
3818453 11.1.1.872 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_ENGASE1_C 0.62 53.0 4.33e-01 95.7% 73.8%
3631248 220.1.1.20 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_TFIIH 0.62 47.0 3.86e-01 81.2% 50.4%
5019765 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.62 55.0 4.89e-01 100.0% 72.0%
3257022 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.62 52.0 4.45e-01 92.8% 73.6%
3276840 11.1.1.793 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7743 0.61 51.0 4.36e-01 91.3% 69.1%
3264433 11.1.1.843 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7034 0.61 49.0 4.20e-01 89.9% 76.5%
4532022 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.60 52.0 4.12e-01 97.1% 80.0%
3773744 883.1.1.1 a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › LBP_BPI_CETP 0.60 53.0 4.06e-01 100.0% 65.5%
4942841 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.60 49.0 4.09e-01 88.4% 55.7%
4809346 1.1.13.57 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › PF30637 0.60 41.0 3.83e-01 71.0% 100.0%
4029641 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.60 50.0 3.16e-01 89.9% 32.7%
3856363 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.59 51.0 3.85e-01 97.1% 54.3%
3295485 2003.1.5.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.59 53.0 3.40e-01 100.0% 32.9%
2029617 5.1.2.8 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › Glyco_hydro_43 0.59 53.0 3.26e-01 100.0% 16.7%
411 2.3.1.2 beta barrels › OB-fold › TIMP-like › TIMP-like › NTR 0.59 51.0 4.15e-01 97.1% 55.0%
4976837 4272.1.1.1 a+b two layers › Nqo5-like › Nqo5-like › Nqo5-like › Complex1_30kDa 0.59 44.0 3.46e-01 81.2% 51.3%
3502307 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.59 48.0 3.77e-01 91.3% 66.7%
4030473 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.59 52.0 3.23e-01 100.0% 26.2%
3279484 243.1.1.28 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF4440 0.59 51.0 4.11e-01 97.1% 81.5%
3838810 5085.1.1.1 a+b duplicates or obligate multimers › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › OEP 0.59 41.0 2.58e-01 73.9% 57.1%
3278592 7579.1.1.0 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases 0.59 50.0 2.99e-01 98.6% 81.3%
4965619 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 48.0 4.53e-01 91.3% 100.0%
4478491 2.1.1.6 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.58 53.0 4.55e-01 100.0% 84.8%
4393593 1.1.13.5 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_GPD 0.58 46.0 4.17e-01 87.0% 87.4%
3711366 11.1.5.7 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Adap_comp_sub 0.58 46.0 4.01e-01 91.3% 94.8%
3289104 7579.1.1.0 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases 0.58 48.0 2.93e-01 97.1% 80.0%
3724449 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.58 50.0 4.64e-01 98.6% 81.1%
3461988 5.1.3.54 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF1668 0.57 50.0 3.18e-01 97.1% 19.4%
3613043 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.57 46.0 3.23e-01 89.9% 65.5%
3387833 7503.1.1.7 a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › LpoB 0.57 42.0 3.17e-01 78.3% 98.8%
3189800 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.57 49.0 3.88e-01 97.1% 86.2%
3488069 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.57 45.0 2.80e-01 87.0% 27.2%
5003898 2.1.1.80 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB 0.56 49.0 4.17e-01 97.1% 73.9%
1871017 2.3.1.2 beta barrels › OB-fold › TIMP-like › TIMP-like › NTR 0.56 48.0 3.68e-01 100.0% 44.6%
4042289 2008.6.1.1 a/b three-layered sandwiches › Restriction endonuclease-like › Acetyl-CoA carboxylase AC4 and AC5 domains › Acetyl-CoA carboxylase AC4 and AC5 domains › ACC_central 0.56 49.0 3.35e-01 100.0% 62.7%
3829265 2.1.1.229 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF30940 0.56 49.0 4.06e-01 97.1% 85.0%
3416893 2008.6.1.1 a/b three-layered sandwiches › Restriction endonuclease-like › Acetyl-CoA carboxylase AC4 and AC5 domains › Acetyl-CoA carboxylase AC4 and AC5 domains › ACC_central 0.56 49.0 3.44e-01 100.0% 56.5%
3459363 243.3.1.74 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF1668 0.55 48.0 4.57e-01 100.0% 97.6%
3690324 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.55 49.0 3.89e-01 100.0% 78.6%
3267804 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.55 46.0 4.07e-01 92.8% 82.0%
3548841 2008.6.1.1 a/b three-layered sandwiches › Restriction endonuclease-like › Acetyl-CoA carboxylase AC4 and AC5 domains › Acetyl-CoA carboxylase AC4 and AC5 domains › ACC_central 0.54 48.0 3.20e-01 100.0% 60.0%
3920627 192.18.1.0 alpha bundles › Long alpha-hairpin › MxiH-like › MxiH-like 0.54 47.0 2.86e-01 100.0% 87.4%
3640334 241.2.1.0 a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like 0.54 42.0 3.55e-01 91.3% 49.2%
3729993 243.1.1.28 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF4440 0.54 48.0 3.89e-01 100.0% 84.6%
4066295 5085.1.1.1 a+b duplicates or obligate multimers › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › OEP 0.53 37.0 2.30e-01 73.9% 54.7%
3172477 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.53 46.0 3.73e-01 98.6% 99.3%
3967141 327.16.1.1 a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › Secretin 0.53 45.0 3.01e-01 95.7% 64.0%
3925311 206.1.1.20 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr 0.52 46.0 2.83e-01 100.0% 24.6%
4682338 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.52 42.0 2.69e-01 97.1% 22.3%
3934533 922.1.1.0 few secondary structure elements › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP-1 type 1 repeat 0.52 34.0 3.89e-01 72.5% 96.0%
4675864 207.12.1.2 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Protein M antibody-binding region › Protein M antibody-binding region › M_large_dom 0.51 44.0 2.82e-01 100.0% 25.8%