←Back to structures

MT366760.1__QJT70807.1__GR7B_00009__00009

Bact-Vir

MT366760.1__QJT70807.1__GR7B_00009__00009

Identity

Accession:
MT366760 ↗
Kingdom:
phage

Quality

77.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Vibrio_phage_vB_VcorM_GR7B

TaxID: 2711165

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 17-119
PDB
Domain cluster: rep: OQ992557.1__WNV49121.1__X__00019__D65-144
D2 medium residues 120-187
PDB
Domain cluster: representative
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4gu4A01 2.10.25.20 Mainly Beta › Ribbon › Laminin › reovirus attachment protein sigma1; domain 1 0.66 33.0 3.97e-01 73.5% 74.4%
3u1nB01 1.10.3210.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 0.55 39.0 2.60e-01 76.5% 55.5%
3c0iA02 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.55 48.0 3.47e-01 100.0% 99.0%
2gmqA00 2.40.450.10 Mainly Beta › Beta Barrel › PUA domain-like fold › PUA domain-like domain 0.55 37.0 3.39e-01 72.1% 57.6%
4g84A01 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.53 36.0 2.38e-01 72.1% 36.9%
4i62A01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.51 38.0 3.07e-01 80.9% 63.2%
2jhjA02 1.10.340.30 Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Hypothetical protein; domain 2 0.50 35.0 3.07e-01 77.9% 94.2%
ECOD (23)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3269732 206.1.1.49 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › DUF5898 0.69 61.0 4.31e-01 100.0% 56.7%
3276415 206.1.1.49 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › DUF5898 0.63 54.0 4.07e-01 98.5% 47.2%
3972767 206.1.1.17 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Kdo 0.59 50.0 3.05e-01 98.5% 20.0%
5035978 206.1.1.9 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › RIO1 0.58 50.0 3.68e-01 100.0% 44.0%
4558880 131.1.1.3 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD 0.58 41.0 2.57e-01 75.0% 78.6%
3926768 206.1.1.70 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, ABC1 0.57 49.0 3.20e-01 100.0% 42.2%
3694611 206.1.1.1 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.56 48.0 3.09e-01 100.0% 38.8%
4012647 206.1.1.0 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.56 48.0 3.10e-01 100.0% 44.1%
3221091 206.1.1.1 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.56 48.0 3.51e-01 100.0% 62.0%
None — 0.56 48.0 3.08e-01 100.0% 37.3%
3971381 206.1.1.17 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Kdo 0.56 47.0 3.35e-01 98.5% 41.0%
3493263 5001.1.1.1 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 0.55 41.0 2.69e-01 80.9% 62.5%
5050503 206.1.1.0 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.54 47.0 2.90e-01 100.0% 45.7%
4295958 5001.1.1.1 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 0.54 38.0 2.79e-01 75.0% 73.5%
3939027 206.1.1.1 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.53 46.0 2.88e-01 100.0% 31.0%
3264532 206.1.1.1 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.53 46.0 2.75e-01 100.0% 23.7%
3830246 206.1.1.7 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PI3_PI4_kinase 0.52 43.0 3.07e-01 92.6% 35.7%
4053319 101.1.2.55 ↗ alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB 0.52 35.0 3.30e-01 70.6% 92.9%
4029005 206.1.1.1 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.52 45.0 3.19e-01 100.0% 59.6%
3275633 206.1.1.20 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr 0.51 43.0 2.88e-01 100.0% 41.9%
3282707 323.1.1.5 ↗ a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Condensation 0.51 35.0 2.75e-01 75.0% 62.8%
3396193 319.1.1.1 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.50 35.0 2.99e-01 76.5% 70.8%
4989844 205.1.1.0 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin 0.50 32.0 3.16e-01 88.2% 58.7%