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MT366943.1__QKN87378.1__vBYenM646_34__00034
Bact-VirMT366943.1__QKN87378.1__vBYenM646_34__00034
Identity
- Accession:
- MT366943 ↗
- Kingdom:
- phage
Quality
90.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-51
Domain cluster:
rep: MH155870.1__AWN05243.1__SEA_IBANTIK_19__00019__D3-51
CATH (31)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1a1aB00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.70 | 44.0 | 3.49e-01 | 82.0% | 31.4% |
| 4e6zA02 | 3.40.1350.100 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.67 | 59.0 | 4.89e-01 | 100.0% | 60.7% |
| 4gxbA01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.67 | 53.0 | 4.45e-01 | 100.0% | 49.5% |
| 2ip4A02 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.64 | 50.0 | 4.70e-01 | 92.0% | 71.2% |
| 4dzgA00 | 2.60.120.380 | Mainly Beta › Sandwich › Jelly Rolls › | 0.63 | 53.0 | 4.16e-01 | 100.0% | 43.4% |
| 1x67A01 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.62 | 50.0 | 3.72e-01 | 94.0% | 34.6% |
| 4ekuA01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.62 | 52.0 | 4.07e-01 | 100.0% | 42.7% |
| 1zpwX00 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.61 | 50.0 | 4.40e-01 | 98.0% | 85.4% |
| 3e1uA00 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.61 | 51.0 | 3.57e-01 | 100.0% | 77.2% |
| 2h6uA00 | 2.60.40.180 | Mainly Beta › Sandwich › Immunoglobulin-like › Transthyretin/hydroxyisourate hydrolase domain | 0.61 | 51.0 | 4.04e-01 | 100.0% | 50.0% |
| 3delB02 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.61 | 50.0 | 4.21e-01 | 98.0% | 95.7% |
| 3egrA00 | 3.10.20.520 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phenylacetic acid degradation B | 0.60 | 48.0 | 4.54e-01 | 94.0% | 85.7% |
| 4iihB04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 51.0 | 4.03e-01 | 98.0% | 63.6% |
| 1hx6A02 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.59 | 50.0 | 3.71e-01 | 100.0% | 46.8% |
| 5mmjj00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.59 | 39.0 | 3.25e-01 | 70.0% | 42.4% |
| 2qz8A02 | 3.30.70.920 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain | 0.58 | 44.0 | 3.97e-01 | 92.0% | 96.3% |
| 1qysA00 | 3.30.1710.10 | Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein | 0.58 | 48.0 | 4.00e-01 | 96.0% | 57.6% |
| 3mgjA00 | 3.30.70.2690 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › LOR/SDH bifunctional enzyme, conserved domain | 0.58 | 45.0 | 3.79e-01 | 92.0% | 97.9% |
| 4d7pA00 | 2.60.40.730 | Mainly Beta › Sandwich › Immunoglobulin-like › SOR catalytic domain | 0.56 | 45.0 | 3.83e-01 | 100.0% | 56.2% |
| 3qp1A00 | 3.30.450.80 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain | 0.56 | 48.0 | 3.32e-01 | 100.0% | 59.0% |
| 2pttB00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 46.0 | 3.74e-01 | 100.0% | 63.9% |
| 3bguA01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 42.0 | 3.61e-01 | 94.0% | 100.0% |
| 3h20A01 | 3.30.1490.240 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › RepB DNA-primase, N-terminal domain | 0.54 | 43.0 | 4.08e-01 | 100.0% | 78.8% |
| 8b38A01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.54 | 45.0 | 3.01e-01 | 98.0% | 73.9% |
| 2atfA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.53 | 43.0 | 3.03e-01 | 96.0% | 26.3% |
| 2jvfA00 | 3.30.1710.10 | Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein | 0.52 | 39.0 | 3.43e-01 | 94.0% | 57.4% |
| 2e7yB00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.52 | 42.0 | 2.75e-01 | 98.0% | 49.4% |
| 3n0vA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.51 | 40.0 | 3.55e-01 | 94.0% | 97.6% |
| 4q0yA00 | 2.60.40.4400 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 43.0 | 3.29e-01 | 100.0% | 61.1% |
| 1t4aA00 | 3.30.1280.10 | Alpha Beta › 2-Layer Sandwich › Mth169; Chain: A , › Phosphoribosylformylglycinamidine synthase subunit PurS | 0.51 | 41.0 | 3.69e-01 | 100.0% | 100.0% |
| 6bq9A02 | 3.30.1360.40 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.50 | 34.0 | 2.88e-01 | 72.0% | 48.9% |
ECOD (35)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3250014 | 264.1.1.9 ↗ | beta barrels › LigT-like › LigT-related › LigT-related › 2_5_RNA_ligase2 | 0.73 | 53.0 | 3.80e-01 | 78.0% | 51.4% |
| 3194942 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.71 | 62.0 | 4.40e-01 | 100.0% | 37.0% |
| 3171963 | 224.1.1.1 ↗ | a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like › Cofilin_ADF | 0.71 | 57.0 | 4.27e-01 | 96.0% | 35.4% |
| 4957328 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.70 | 62.0 | 4.90e-01 | 100.0% | 55.2% |
| 3275875 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.69 | 59.0 | 4.66e-01 | 100.0% | 46.7% |
| 3465504 | 4076.1.1.0 ↗ | a+b two layers › L9 N-domain-like › L9 N-domain-like › L9 N-domain-like | 0.69 | 52.0 | 5.21e-01 | 98.0% | 84.0% |
| 3713104 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.65 | 57.0 | 4.34e-01 | 100.0% | 45.0% |
| 3898135 | 10.2.1.5 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › TGFb_propeptide | 0.65 | 56.0 | 3.82e-01 | 100.0% | 32.6% |
| 3689024 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.65 | 55.0 | 4.16e-01 | 100.0% | 42.3% |
| 4338821 | 221.1.1.69 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › SNX17-27-31_F1_FERM | 0.64 | 53.0 | 4.34e-01 | 100.0% | 47.6% |
| 3338287 | 221.1.1.166 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › PF26130 | 0.62 | 48.0 | 4.57e-01 | 96.0% | 70.8% |
| 3266917 | 862.1.1.1 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › DNA_primase_S | 0.62 | 49.0 | 3.08e-01 | 94.0% | 47.0% |
| 5034749 | 10.1.2.194 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › Lectin_like | 0.61 | 52.0 | 3.68e-01 | 100.0% | 33.5% |
| 4964337 | 3115.5.1.1 ↗ | a+b two layers › GP2-like › phenylacetate-CoA oxygenase subunit PaaB › phenylacetate-CoA oxygenase subunit PaaB › PaaB | 0.61 | 47.0 | 4.68e-01 | 94.0% | 94.5% |
| 4537345 | 304.4.1.1 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg | 0.60 | 49.0 | 4.26e-01 | 98.0% | 92.9% |
| 3666791 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.60 | 46.0 | 4.60e-01 | 90.0% | 100.0% |
| 3289257 | 304.4.1.1 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg | 0.60 | 48.0 | 4.23e-01 | 98.0% | 85.9% |
| 4578112 | 304.4.1.1 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg | 0.60 | 48.0 | 4.16e-01 | 98.0% | 82.2% |
| 199962 | 3115.5.1.1 ↗ | a+b two layers › GP2-like › phenylacetate-CoA oxygenase subunit PaaB › phenylacetate-CoA oxygenase subunit PaaB › PaaB | 0.60 | 48.0 | 4.54e-01 | 94.0% | 85.7% |
| 4970162 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.60 | 51.0 | 3.61e-01 | 100.0% | 34.5% |
| 4974982 | 304.120.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI | 0.60 | 46.0 | 4.39e-01 | 88.0% | 100.0% |
| 4414821 | 304.56.1.2 ↗ | a+b two layers › Alpha-beta plaits › CRISPR associated protein Cas2-like › CRISPR associated protein Cas2-like › CRISPR_Cas2 | 0.59 | 47.0 | 4.00e-01 | 96.0% | 80.9% |
| 5030635 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.59 | 46.0 | 3.43e-01 | 96.0% | 99.4% |
| 5062623 | 206.1.3.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp | 0.59 | 48.0 | 3.38e-01 | 98.0% | 26.5% |
| 3664975 | 207.1.1.323 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRRNT_2, LRR_6, LRR_8, Island | 0.59 | 48.0 | 2.70e-01 | 100.0% | 6.7% |
| 3589327 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.58 | 46.0 | 4.10e-01 | 96.0% | 97.5% |
| 4321822 | 304.56.1.2 ↗ | a+b two layers › Alpha-beta plaits › CRISPR associated protein Cas2-like › CRISPR associated protein Cas2-like › CRISPR_Cas2 | 0.58 | 46.0 | 4.12e-01 | 96.0% | 85.0% |
| 3460588 | 207.1.1.35 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1,LRR_8,Island | 0.58 | 47.0 | 3.02e-01 | 100.0% | 17.9% |
| 3748734 | 11.1.1.99 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set | 0.58 | 47.0 | 3.65e-01 | 100.0% | 51.5% |
| 3620456 | 221.1.1.64 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Formin_GBD_N | 0.57 | 48.0 | 3.85e-01 | 100.0% | 49.1% |
| 3618720 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.57 | 43.0 | 3.70e-01 | 100.0% | 48.4% |
| 3175440 | 3519.1.1.1 ↗ | beta complex topology › Myoferlin inner DysF domain › Myoferlin inner DysF domain › Myoferlin inner DysF domain › Pex24p | 0.57 | 45.0 | 3.72e-01 | 100.0% | 90.0% |
| 3520108 | 10.12.1.1 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › cNMP_binding | 0.55 | 45.0 | 3.33e-01 | 96.0% | 33.8% |
| 3623624 | 382.1.1.2 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › Toxin_TOLIP | 0.54 | 43.0 | 3.96e-01 | 98.0% | 89.2% |
| 4289847 | 272.1.1.1 ↗ | a+b two layers › TolA/TonB C-terminal domain › TolA/TonB C-terminal domain › TolA/TonB C-terminal domain › TonB_C | 0.50 | 43.0 | 3.55e-01 | 100.0% | 69.5% |