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MT366948.1__QNN96976.1__X__00006

Bact-Vir

MT366948.1__QNN96976.1__X__00006

Identity

Accession:
MT366948 ↗
Kingdom:
phage

Quality

88.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Spbetavirus› Bacillus_phage_Hyb3phi3Ts-SPbeta

TaxID: 2735534

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-164
PDB
Domain cluster: rep: MN270270.1__QGJ86094.1__X__00001__D5-147
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF09346.16 best SMI1_KNR4 72.1 9.50e-20 85.2% 97.6%
PF14568.12 SUKH_6 59.0 8.50e-16 82.1% 99.2%
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3d5pA00 3.40.1580.10 Alpha Beta › 3-Layer(aba) Sandwich › SMI1/KNR4-like › SMI1/KNR4-like 0.83 62.0 6.79e-01 94.4% 92.5%
2pagA00 3.40.1580.10 Alpha Beta › 3-Layer(aba) Sandwich › SMI1/KNR4-like › SMI1/KNR4-like 0.79 62.0 6.79e-01 100.0% 100.0%
2icgA00 3.40.1580.10 Alpha Beta › 3-Layer(aba) Sandwich › SMI1/KNR4-like › SMI1/KNR4-like 0.77 68.0 6.95e-01 100.0% 95.6%
3ffvA00 3.40.1580.20 Alpha Beta › 3-Layer(aba) Sandwich › SMI1/KNR4-like › Syd protein 0.68 64.0 6.14e-01 100.0% 97.2%
1njgB01 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.61 28.0 3.87e-01 88.3% 90.4%
5bmnA04 3.30.310.50 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain 0.51 23.0 3.03e-01 95.7% 78.3%
ECOD (10)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
168394 4205.1.1.3 ↗ a+b two layers › SMI1/KNR4-like › SMI1/KNR4-like › SMI1/KNR4-like › SMI1_KNR4 0.83 62.0 6.79e-01 94.4% 92.5%
3838634 4205.1.1.3 ↗ a+b two layers › SMI1/KNR4-like › SMI1/KNR4-like › SMI1/KNR4-like › SMI1_KNR4 0.83 64.0 7.16e-01 92.6% 100.0%
3959688 4205.1.1.0 ↗ a+b two layers › SMI1/KNR4-like › SMI1/KNR4-like › SMI1/KNR4-like 0.77 60.0 6.68e-01 90.7% 100.0%
6664 4205.1.1.5 ↗ a+b two layers › SMI1/KNR4-like › SMI1/KNR4-like › SMI1/KNR4-like › SUKH_6 0.77 68.0 6.97e-01 100.0% 96.2%
4162535 4205.1.1.5 ↗ a+b two layers › SMI1/KNR4-like › SMI1/KNR4-like › SMI1/KNR4-like › SUKH_6 0.73 59.0 6.22e-01 100.0% 93.1%
3254119 4205.1.1.3 ↗ a+b two layers › SMI1/KNR4-like › SMI1/KNR4-like › SMI1/KNR4-like › SMI1_KNR4 0.70 67.0 6.15e-01 100.0% 95.0%
3841980 4205.1.1.0 ↗ a+b two layers › SMI1/KNR4-like › SMI1/KNR4-like › SMI1/KNR4-like 0.64 59.0 5.35e-01 97.5% 87.6%
4458447 148.1.3.21 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_4 0.61 29.0 4.05e-01 88.3% 97.1%
4993192 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.54 24.0 3.58e-01 84.0% 100.0%
5051212 506.2.1.2 ↗ beta meanders › Colicin E3 ribonuclease domain-like › UvrB interaction domain › UvrB interaction domain › UvrB_inter 0.52 29.0 3.71e-01 96.3% 96.7%