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MT375042.1__QKN87927.1__Alexa_046__00046
Bact-VirMT375042.1__QKN87927.1__Alexa_046__00046
Identity
- Accession:
- MT375042 ↗
- Kingdom:
- phage
Quality
63.3
mean pLDDT
Taxonomy
TaxID: 2736223
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-56
Domain cluster:
representative
CATH (36)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2da4A01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.85 | 58.0 | 5.51e-01 | 75.0% | 60.6% |
| 1s8nA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 53.0 | 5.28e-01 | 73.2% | 81.0% |
| 1u9pA00 | 1.10.1220.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant › Met repressor-like | 0.75 | 64.0 | 5.29e-01 | 92.9% | 77.1% |
| 3g2bA00 | 1.10.10.1150 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Coenzyme PQQ synthesis protein D (PqqD) | 0.72 | 46.0 | 3.92e-01 | 75.0% | 40.0% |
| 4e4yA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.72 | 55.0 | 3.51e-01 | 80.4% | 30.6% |
| 1w36F02 | 1.10.10.160 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.70 | 63.0 | 5.15e-01 | 100.0% | 56.0% |
| 8h4pA01 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.68 | 59.0 | 3.69e-01 | 98.2% | 84.4% |
| 3kp1E02 | 1.10.8.1000 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ornithine 4,5 aminomutase S component, alpha subunit-like | 0.68 | 45.0 | 4.26e-01 | 73.2% | 55.7% |
| 1c5aA00 | 1.20.91.20 | Mainly Alpha › Up-down Bundle › Influenza Virus Matrix Protein; Chain A, domain 1 › Anaphylotoxins (complement system) | 0.68 | 41.0 | 3.92e-01 | 85.7% | 50.8% |
| 2rhcA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.67 | 49.0 | 3.14e-01 | 78.6% | 28.4% |
| 3he0B00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.66 | 51.0 | 3.57e-01 | 83.9% | 31.5% |
| 2x1dA02 | 1.10.10.2120 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.65 | 50.0 | 4.53e-01 | 80.4% | 60.8% |
| 1di1A00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.64 | 57.0 | 3.60e-01 | 100.0% | 86.6% |
| 1f5xA00 | 1.20.900.10 | Mainly Alpha › Up-down Bundle › Dbl Homology Domain; Chain A › Dbl homology (DH) domain | 0.64 | 46.0 | 3.19e-01 | 80.4% | 21.2% |
| 1lp1A00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.64 | 42.0 | 4.27e-01 | 87.5% | 69.1% |
| 5k9xA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.62 | 53.0 | 3.44e-01 | 96.4% | 94.6% |
| 6ofsA02 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.62 | 46.0 | 3.06e-01 | 78.6% | 21.5% |
| 1d3yA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 43.0 | 3.98e-01 | 89.3% | 57.7% |
| 3uo2B02 | 1.20.1280.20 | Mainly Alpha › Up-down Bundle › Monooxygenase › HscB, C-terminal domain | 0.61 | 42.0 | 3.66e-01 | 71.4% | 52.4% |
| 1fpoC02 | 1.20.1280.20 | Mainly Alpha › Up-down Bundle › Monooxygenase › HscB, C-terminal domain | 0.61 | 44.0 | 3.72e-01 | 85.7% | 47.3% |
| 1m5yA01 | 1.10.4030.10 | Mainly Alpha › Orthogonal Bundle › Triger factor/SurA peptide-binding fold › Porin chaperone SurA, peptide-binding domain | 0.60 | 53.0 | 4.11e-01 | 100.0% | 46.0% |
| 2de2A01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.60 | 41.0 | 2.75e-01 | 71.4% | 24.7% |
| 1m70A02 | 1.10.760.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain | 0.60 | 51.0 | 4.18e-01 | 92.9% | 99.0% |
| 3u61D03 | 1.20.272.10 | Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › | 0.59 | 40.0 | 3.48e-01 | 91.1% | 44.0% |
| 5svlA01 | 1.10.287.940 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › atp-gated p2x4 ion channel | 0.58 | 52.0 | 4.90e-01 | 100.0% | 94.1% |
| 2el7A02 | 1.10.240.10 | Mainly Alpha › Orthogonal Bundle › Tyrosyl-Transfer RNA Synthetase › Tyrosyl-Transfer RNA Synthetase | 0.57 | 47.0 | 4.10e-01 | 98.2% | 71.3% |
| 1dgnA00 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.57 | 45.0 | 3.94e-01 | 89.3% | 96.6% |
| 2hszA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.57 | 40.0 | 3.77e-01 | 100.0% | 58.7% |
| 6n2nA01 | 3.40.920.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate-ferredoxin Oxidoreductase; domain 3 › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III | 0.57 | 40.0 | 2.83e-01 | 75.0% | 23.6% |
| 1wp7A00 | 1.10.287.770 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YojJ-like | 0.56 | 45.0 | 4.28e-01 | 98.2% | 73.4% |
| 2gomA00 | 1.10.10.1270 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Sbi, C3 binding domain IV | 0.55 | 36.0 | 3.57e-01 | 83.9% | 63.9% |
| 5z4zC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 44.0 | 3.84e-01 | 91.1% | 87.5% |
| 3v53E00 | 1.20.1390.10 | Mainly Alpha › Up-down Bundle › PWI domain › PWI domain | 0.54 | 48.0 | 3.92e-01 | 100.0% | 96.1% |
| 7lwzB01 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.54 | 45.0 | 3.19e-01 | 98.2% | 60.1% |
| 2g38B00 | 1.20.1260.20 | Mainly Alpha › Up-down Bundle › Ferritin › PPE superfamily | 0.54 | 49.0 | 3.39e-01 | 100.0% | 85.5% |
| 1vfiA00 | 1.10.246.100 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › Vanadium-binding protein 2 | 0.52 | 43.0 | 3.60e-01 | 91.1% | 71.6% |
ECOD (20)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3010699 | 3276.1.1.0 ↗ | alpha arrays › N-terminal domain in MogR repressor › N-terminal domain in MogR repressor › N-terminal domain in MogR repressor | 0.83 | 54.0 | 5.29e-01 | 71.4% | 62.3% |
| 3180755 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.80 | 60.0 | 5.89e-01 | 96.4% | 75.0% |
| 3235389 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.79 | 70.0 | 5.01e-01 | 98.2% | 39.4% |
| 2723200 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.77 | 67.0 | 5.46e-01 | 100.0% | 55.6% |
| 3224423 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.77 | 65.0 | 6.63e-01 | 94.6% | 100.0% |
| 4373529 | 101.1.11.43 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › TraY | 0.76 | 65.0 | 5.35e-01 | 94.6% | 87.0% |
| 4995419 | 592.2.1.0 ↗ | alpha arrays › PWI domain-like › YugE-like › YugE-like | 0.68 | 47.0 | 4.10e-01 | 82.1% | 48.2% |
| 4363314 | 101.1.2.485 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF2513 | 0.66 | 46.0 | 3.66e-01 | 75.0% | 35.7% |
| 3475426 | 103.12.1.0 ↗ | alpha arrays › RuvA-C › ANTAR domain › ANTAR domain | 0.66 | 46.0 | 4.29e-01 | 73.2% | 95.7% |
| 3993676 | 3919.1.1.0 ↗ | alpha duplicates or obligate multimers › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 | 0.66 | 61.0 | 4.84e-01 | 100.0% | 70.5% |
| 4031085 | 3826.1.1.79 ↗ | alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › DUF1024 | 0.65 | 51.0 | 4.60e-01 | 94.6% | 61.5% |
| 3296414 | 192.29.1.168 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › DUF641 | 0.64 | 44.0 | 4.03e-01 | 83.9% | 57.1% |
| 3168024 | 103.1.1.3 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › CRAL_TRIO_N | 0.61 | 49.0 | 4.21e-01 | 91.1% | 73.7% |
| 3791287 | 6155.1.1.1 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › MtN3_slv | 0.57 | 43.0 | 3.61e-01 | 100.0% | 50.0% |
| 4990623 | 6155.1.1.0 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter | 0.56 | 43.0 | 3.94e-01 | 100.0% | 64.3% |
| 3834982 | 3444.1.1.6 ↗ | alpha arrays › DP domain › DP domain › DP domain › VDE | 0.54 | 44.0 | 3.98e-01 | 89.3% | 82.7% |
| 4017010 | 633.21.1.0 ↗ | alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 | 0.53 | 46.0 | 3.47e-01 | 98.2% | 78.6% |
| 5060249 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.53 | 42.0 | 4.05e-01 | 87.5% | 80.0% |
| 4986068 | 5082.1.1.1 ↗ | alpha bundles › Cation efflux protein transmembrane domain-like › Cation efflux protein transmembrane domain-like › Cation efflux protein transmembrane domain-like › Cation_efflux | 0.53 | 45.0 | 3.13e-01 | 98.2% | 67.5% |
| 4057414 | 4959.1.1.1 ↗ | a+b complex topology › first helical domain in RNA-polymerase beta-prime subunit › first helical domain in RNA-polymerase beta-prime subunit › first helical domain in RNA-polymerase beta-prime subunit › RNA_pol_Rpb1_3 | 0.51 | 38.0 | 2.85e-01 | 83.9% | 93.1% |