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MT375519.1__QLF87966.1__Aegir_gp17__00017

Bact-Vir

MT375519.1__QLF87966.1__Aegir_gp17__00017

Identity

Accession:
MT375519 ↗
Kingdom:
phage

Quality

80.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pelagibacter_phage_Aegir_EXVC013S

TaxID: 2736224

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 23-73
PDB
Domain cluster: representative
D2 medium residues 74-166
PDB
Domain cluster: rep: OX241570.1__CAH9015419.1__VP230E391_P0004__00004__D90-197
CATH (16)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2e58A01 1.20.120.1180 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.68 48.0 5.47e-01 76.3% 100.0%
5xs2B02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.63 45.0 4.09e-01 82.8% 53.0%
1or7B01 1.10.1740.10 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif 0.61 45.0 4.51e-01 78.5% 77.7%
4q6rA02 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.60 45.0 4.05e-01 79.6% 76.3%
1u8vB03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.59 41.0 3.18e-01 71.0% 80.3%
2yyiA03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.59 42.0 3.24e-01 74.2% 73.0%
2iy9A00 3.40.50.200 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Peptidase S8/S53 domain 0.58 42.0 2.94e-01 76.3% 47.9%
1gq2A02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.57 47.0 3.37e-01 92.5% 47.0%
4oo2A02 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.57 42.0 3.31e-01 78.5% 55.8%
5g0xA00 3.40.800.20 Alpha Beta › 3-Layer(aba) Sandwich › Arginase; Chain A › Histone deacetylase domain 0.56 43.0 2.88e-01 81.7% 85.1%
4xcgA02 3.30.260.10 Alpha Beta › 2-Layer Sandwich › GROEL; domain 2 › TCP-1-like chaperonin intermediate domain 0.55 42.0 3.95e-01 81.7% 82.3%
2gjxA01 3.30.379.10 Alpha Beta › 2-Layer Sandwich › Chitobiase; domain 2 › Chitobiase/beta-hexosaminidase domain 2-like 0.53 38.0 3.46e-01 75.3% 71.1%
4fzsA00 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.52 41.0 3.27e-01 87.1% 99.0%
1oqwA00 3.30.700.10 Alpha Beta › 2-Layer Sandwich › Glycoprotein, Type 4 Pilin › Glycoprotein, Type 4 Pilin 0.52 48.0 4.07e-01 98.9% 98.6%
3aq1B02 3.30.260.10 Alpha Beta › 2-Layer Sandwich › GROEL; domain 2 › TCP-1-like chaperonin intermediate domain 0.52 37.0 3.57e-01 76.3% 82.7%
4f0uA00 1.10.490.20 Mainly Alpha › Orthogonal Bundle › Globin-like › Phycocyanins 0.51 37.0 3.11e-01 76.3% 50.6%
ECOD (14)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3389399 142.1.1.22 ↗ alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › SCAF11-like_C 0.76 64.0 6.10e-01 90.3% 79.0%
3563012 142.1.1.22 ↗ alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › SCAF11-like_C 0.74 56.0 5.98e-01 78.5% 91.3%
4548652 5086.1.1.0 ↗ alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.68 56.0 4.23e-01 87.1% 73.8%
4020945 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.65 45.0 4.88e-01 78.5% 89.3%
3912562 4072.1.1.1 ↗ a+b complex topology › BTG domain-like › BTG domain-like › BTG domain-like › BTG 0.63 45.0 4.07e-01 74.2% 73.2%
3788426 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.61 46.0 2.78e-01 78.5% 57.1%
3526060 1075.1.1.4 ↗ alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain › ABC2_membrane_3 0.60 43.0 3.02e-01 74.2% 41.7%
2324080 883.1.1.0 ↗ a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like 0.60 43.0 2.98e-01 80.6% 21.2%
3210018 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.60 44.0 4.23e-01 77.4% 90.5%
5008705 2498.5.1.1 ↗ mixed a+b and a/b › Zincin-like › GroEL-intermediate domain like › GroEL-intermediate domain like › Cpn60_TCP1 0.58 40.0 3.77e-01 72.0% 87.0%
4992064 2004.1.1.223 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › bpMoxR 0.58 42.0 3.00e-01 77.4% 25.4%
4375035 2498.5.1.1 ↗ mixed a+b and a/b › Zincin-like › GroEL-intermediate domain like › GroEL-intermediate domain like › Cpn60_TCP1 0.55 41.0 3.94e-01 79.6% 84.5%
3254340 3621.1.1.1 ↗ alpha arrays › Dipeptidyl-peptidase 2 helical domain › Dipeptidyl-peptidase 2 helical domain › Dipeptidyl-peptidase 2 helical domain › Peptidase_S28 0.54 41.0 3.76e-01 82.8% 90.4%
139433 5001.1.1.6 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Bac_rhodopsin 0.53 42.0 3.11e-01 83.9% 38.1%