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MT375529.1__QLF88478.1__Kolga_gp32__00032

Bact-Vir

MT375529.1__QLF88478.1__Kolga_gp32__00032

Identity

Accession:
MT375529 ↗
Kingdom:
phage

Quality

85.9 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pelagibacter_phage_Kolga_EXVC016S

TaxID: 2736233

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 11-107
PDB
Domain cluster: rep: IMGVR_UViG_3300002219_000010-3300002219-SCADCLC_1000083292__D4-110
CATH (37)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2dp9A01 2.30.130.30 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › Hypothetical protein. 0.80 72.0 7.16e-01 100.0% 94.0%
3iuwA00 2.30.130.30 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › Hypothetical protein. 0.78 58.0 6.43e-01 99.0% 96.2%
3s9xA00 3.10.400.10 Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase 0.76 69.0 5.82e-01 100.0% 98.7%
2kkuA00 2.30.130.30 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › Hypothetical protein. 0.76 70.0 6.13e-01 100.0% 83.5%
1r3fA02 2.30.130.10 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain 0.75 45.0 5.34e-01 100.0% 90.8%
1i2dA02 3.10.400.10 Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase 0.72 66.0 5.26e-01 100.0% 71.3%
1v47A01 3.10.400.10 Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase 0.72 66.0 5.89e-01 100.0% 96.2%
5dnoA00 3.10.590.10 Alpha Beta › Roll › ph1033 like fold › ph1033 like domains 0.71 59.0 4.96e-01 100.0% 53.7%
8a8gA01 3.10.400.10 Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase 0.70 65.0 5.68e-01 100.0% 91.4%
4rcmB00 3.10.590.10 Alpha Beta › Roll › ph1033 like fold › ph1033 like domains 0.70 62.0 5.23e-01 100.0% 58.5%
1xneA00 2.30.130.30 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › Hypothetical protein. 0.70 63.0 6.05e-01 100.0% 96.5%
3m6wA03 2.30.130.60 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › 0.70 44.0 5.06e-01 99.0% 91.0%
2gksB01 3.10.400.10 Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase 0.70 63.0 5.57e-01 100.0% 92.9%
1te7A00 2.30.130.30 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › Hypothetical protein. 0.70 62.0 6.09e-01 96.9% 99.0%
1jhdA02 3.10.400.10 Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase 0.69 63.0 5.00e-01 100.0% 69.9%
1s04A00 2.30.130.30 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › Hypothetical protein. 0.69 62.0 5.96e-01 100.0% 100.0%
1x6vA02 3.10.400.10 Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase 0.68 62.0 5.27e-01 100.0% 83.5%
5z8lA01 2.30.30.490 Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain 0.66 34.0 3.18e-01 96.9% 40.3%
1wruA01 2.30.300.10 Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold 0.61 48.0 3.98e-01 99.0% 46.9%
2cx0A02 2.30.130.10 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain 0.61 48.0 5.13e-01 100.0% 98.8%
3kyfA02 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.61 46.0 4.39e-01 100.0% 67.5%
3in6A02 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.60 53.0 4.99e-01 100.0% 88.9%
7pzoA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.59 44.0 4.51e-01 100.0% 80.2%
1vl7A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.59 51.0 4.67e-01 100.0% 85.2%
2re7A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.58 51.0 4.65e-01 100.0% 80.3%
3dnhA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.58 50.0 4.42e-01 100.0% 72.2%
3m9qA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.58 32.0 3.67e-01 73.2% 73.6%
1whlA00 2.30.30.190 Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain 0.57 32.0 3.31e-01 97.9% 55.8%
3f7eA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.56 49.0 4.52e-01 100.0% 82.0%
3r90A00 3.10.400.20 Alpha Beta › Roll › Sulfate adenylyltransferase › 0.55 49.0 3.99e-01 100.0% 74.1%
3cp3A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.55 48.0 4.42e-01 100.0% 78.7%
3db0B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.54 47.0 4.37e-01 100.0% 82.3%
2htiA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.54 48.0 4.41e-01 100.0% 80.2%
3q0bX00 2.30.280.10 Mainly Beta › Roll › PUA domain-like › SRA-YDG 0.52 46.0 4.07e-01 100.0% 97.3%
7k98B04 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.52 44.0 3.46e-01 95.9% 89.7%
5o60I00 3.30.70.1730 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein L10, N-terminal RNA-binding domain 0.51 38.0 3.53e-01 80.4% 84.9%
4pwyA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.50 39.0 3.01e-01 86.6% 63.6%
ECOD (87)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5023730 1.1.9.9 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH 0.85 76.0 6.53e-01 94.8% 68.3%
4659422 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.85 51.0 6.39e-01 100.0% 98.3%
5079450 1.1.9.9 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH 0.84 79.0 6.84e-01 100.0% 70.7%
5016521 1.1.9.7 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF365 0.83 78.0 6.89e-01 100.0% 75.6%
4995643 1.1.9.9 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH 0.83 78.0 6.67e-01 100.0% 69.7%
4229723 1.1.9.7 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF365 0.83 78.0 6.60e-01 100.0% 77.3%
4940231 1.1.9.9 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH 0.83 78.0 6.88e-01 100.0% 73.7%
4122172 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.82 77.0 7.03e-01 100.0% 80.6%
5070577 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.82 76.0 7.24e-01 99.0% 98.2%
4498250 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.82 65.0 6.22e-01 100.0% 73.6%
5014837 1.1.9.9 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH 0.82 76.0 6.16e-01 100.0% 71.8%
4972120 1.1.9.35 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 0.80 75.0 7.15e-01 100.0% 96.4%
4954540 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.80 74.0 7.11e-01 99.0% 94.5%
5077279 1.1.9.35 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 0.80 75.0 6.93e-01 100.0% 85.8%
5035541 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.79 72.0 7.27e-01 99.0% 98.9%
4330983 1.1.9.11 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › TruB-C_2 0.79 49.0 5.85e-01 100.0% 93.8%
4564336 1.1.9.11 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › TruB-C_2 0.78 47.0 5.72e-01 96.9% 96.7%
4960614 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.78 58.0 5.54e-01 77.3% 78.2%
3165125 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.78 72.0 6.98e-01 99.0% 99.0%
4384734 1.1.9.10 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › TruB_C 0.78 48.0 5.67e-01 100.0% 92.3%
4165251 1.1.9.11 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › TruB-C_2 0.78 49.0 5.80e-01 100.0% 95.4%
4932847 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.77 65.0 5.91e-01 100.0% 68.8%
3208149 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.77 68.0 6.05e-01 100.0% 69.2%
4155252 1.1.9.35 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 0.77 70.0 6.86e-01 99.0% 99.0%
4557607 1.1.9.11 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › TruB-C_2 0.77 47.0 5.56e-01 100.0% 92.3%
4957730 1.1.9.3 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › EVE 0.77 69.0 6.09e-01 100.0% 67.9%
5022429 1.1.9.35 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 0.77 69.0 6.30e-01 97.9% 84.0%
3944719 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.76 70.0 6.18e-01 100.0% 83.5%
4558844 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.76 49.0 5.77e-01 100.0% 96.9%
4990496 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.76 70.0 6.61e-01 100.0% 90.4%
5042221 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.76 70.0 6.81e-01 100.0% 100.0%
4087191 1.1.9.11 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › TruB-C_2 0.76 47.0 5.49e-01 96.9% 92.3%
3817355 1.1.9.9 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH 0.75 70.0 6.28e-01 100.0% 86.9%
5006048 1.1.9.9 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH 0.75 70.0 6.66e-01 100.0% 90.0%
4940359 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.75 69.0 5.56e-01 100.0% 67.8%
4316169 1.1.9.11 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › TruB-C_2 0.74 46.0 5.40e-01 100.0% 92.3%
4013185 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.74 67.0 5.70e-01 100.0% 62.7%
4959440 1.1.9.16 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA_2 0.73 68.0 5.54e-01 100.0% 84.1%
4178357 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.73 48.0 5.62e-01 100.0% 100.0%
4346458 1.1.9.16 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA_2 0.73 66.0 5.37e-01 100.0% 82.8%
4132740 1.1.9.16 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA_2 0.73 67.0 5.54e-01 100.0% 80.0%
3199787 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.73 67.0 5.95e-01 100.0% 71.9%
4589682 1.1.9.16 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA_2 0.72 66.0 5.56e-01 100.0% 85.6%
3894869 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.72 66.0 5.59e-01 100.0% 82.6%
4104106 1.1.9.16 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA_2 0.72 65.0 5.33e-01 100.0% 80.6%
172 1.1.9.16 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA_2 0.72 66.0 5.90e-01 100.0% 97.0%
3619452 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.71 66.0 5.55e-01 100.0% 79.4%
5079294 1.1.9.16 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA_2 0.70 65.0 5.42e-01 100.0% 82.5%
5016524 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.70 64.0 5.57e-01 100.0% 66.9%
4946513 1.1.9.55 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › ATP-sulfurylase 0.70 65.0 5.41e-01 100.0% 82.5%
4121844 1.1.9.16 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA_2 0.70 64.0 5.24e-01 100.0% 75.4%
179 1.1.9.9 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH 0.70 63.0 6.05e-01 100.0% 96.5%
3934702 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.70 65.0 5.65e-01 100.0% 75.0%
4125079 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.70 45.0 5.32e-01 99.0% 98.5%
171 1.1.9.16 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA_2 0.69 63.0 5.17e-01 100.0% 78.0%
4934245 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.69 63.0 5.23e-01 100.0% 59.4%
3635966 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.69 56.0 5.27e-01 100.0% 73.0%
4967879 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.69 62.0 6.29e-01 100.0% 98.9%
4089484 1.1.9.16 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA_2 0.68 62.0 5.25e-01 100.0% 81.2%
3603513 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.68 62.0 5.40e-01 100.0% 71.0%
4014658 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.65 55.0 5.06e-01 100.0% 71.7%
5079425 1.1.9.1 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA 0.65 49.0 5.06e-01 100.0% 85.6%
4946184 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.65 47.0 5.11e-01 96.9% 92.5%
5048970 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.64 44.0 5.06e-01 97.9% 100.0%
4042216 1.1.7.70 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Beta-barrel_GLAA-B_II 0.64 43.0 4.76e-01 92.8% 89.3%
5063642 1.1.9.1 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA 0.63 49.0 4.94e-01 100.0% 81.0%
3059161 1.1.13.30 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › E217_GP41 0.63 46.0 4.93e-01 99.0% 90.2%
3965594 1.1.13.53 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage-tail_3 0.62 48.0 4.89e-01 100.0% 84.2%
3943170 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.61 47.0 4.93e-01 100.0% 87.8%
5002753 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.61 48.0 5.15e-01 99.0% 96.5%
4040604 1.1.9.1 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA 0.60 49.0 4.82e-01 100.0% 81.0%
136189 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.60 53.0 4.64e-01 100.0% 70.7%
3974369 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.60 46.0 4.88e-01 100.0% 94.1%
5021621 1.1.5.8 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx 0.59 53.0 4.75e-01 100.0% 78.5%
4331393 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.59 52.0 4.63e-01 100.0% 77.1%
4961770 1.1.5.8 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx 0.57 50.0 4.67e-01 100.0% 84.0%
3389654 1.1.5.34 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Pyrid_oxidase_2 0.57 49.0 4.09e-01 100.0% 69.7%
4408562 1.1.9.1 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA 0.57 51.0 4.81e-01 100.0% 83.5%
4625547 1.1.9.1 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA 0.57 50.0 4.91e-01 100.0% 90.5%
4956935 1.1.7.28 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › HAS-barrel 0.56 46.0 4.44e-01 96.9% 78.2%
4946578 1.1.7.140 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › DUF87 0.55 48.0 4.47e-01 99.0% 76.7%
3280029 1.1.5.8 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx 0.55 48.0 4.33e-01 100.0% 76.3%
5047697 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.54 47.0 4.34e-01 99.0% 75.2%
4929759 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.53 48.0 4.07e-01 100.0% 98.8%
5023511 1.1.7.28 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › HAS-barrel 0.53 45.0 4.27e-01 99.0% 79.1%
5044755 1.1.7.28 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › HAS-barrel 0.53 47.0 4.34e-01 99.0% 79.2%
5014364 1.1.7.28 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › HAS-barrel 0.52 47.0 4.20e-01 100.0% 80.7%