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MT408532.1__QJT70043.1__SynMITS9220M01_030__00027
Bact-VirMT408532.1__QJT70043.1__SynMITS9220M01_030__00027
Identity
- Accession:
- MT408532 ↗
- Kingdom:
- phage
Quality
82.2
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Kyanoviridae›
Synechococcus_phage_SynMITS9220M01
TaxID: 2736186
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 58-111
D2
medium
residues 112-230_301-334_384-413
Domain cluster:
rep: MF351863.1__ASR76073.1__PBI_BELLAMY_28__00026__D204-351_425-465
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2xskA00 | 2.60.40.2420 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.64 | 32.0 | 4.27e-01 | 100.0% | 89.5% |
| 4gioA00 | 2.60.40.3230 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.61 | 30.0 | 4.05e-01 | 99.5% | 89.6% |
| 3rj2X00 | 2.60.120.1150 | Mainly Beta › Sandwich › Jelly Rolls › | 0.61 | 35.0 | 3.94e-01 | 100.0% | 74.4% |
| 2lgnA00 | 2.60.40.2850 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.59 | 25.0 | 3.77e-01 | 99.5% | 100.0% |
| 4kkpA02 | 2.60.40.3880 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.55 | 32.0 | 3.86e-01 | 90.7% | 88.5% |
| 4a42A00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.55 | 31.0 | 3.60e-01 | 98.4% | 75.6% |
| 2okxA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.55 | 32.0 | 3.39e-01 | 98.9% | 60.0% |
| 4hsaF02 | 2.60.40.2150 | Mainly Beta › Sandwich › Immunoglobulin-like › Interleukin-17 receptor A/B, fibronectin-III-like domain 2 | 0.55 | 29.0 | 3.66e-01 | 88.5% | 86.7% |
| 7uzsX03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 30.0 | 3.71e-01 | 100.0% | 86.1% |
| 1kv3A03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 30.0 | 3.74e-01 | 100.0% | 86.3% |
| 1g0dA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 29.0 | 3.66e-01 | 99.5% | 88.2% |
| 4cu7A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 24.0 | 2.94e-01 | 94.0% | 65.3% |
| 3o0lA00 | 2.60.40.3230 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 30.0 | 3.70e-01 | 92.3% | 92.7% |
| 1ex0A03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 29.0 | 3.55e-01 | 100.0% | 86.0% |
| 1l9nA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 29.0 | 3.54e-01 | 100.0% | 86.8% |
| 4obiA00 | 2.60.320.10 | Mainly Beta › Sandwich › mini-chromosome maintenance (MCM) complex, domain 2 › N-utilization substance G protein NusG, insert domain | 0.51 | 24.0 | 3.23e-01 | 83.6% | 87.4% |
| 5z1aA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 29.0 | 3.57e-01 | 100.0% | 88.1% |
| 1xf1A03 | 2.60.40.1710 | Mainly Beta › Sandwich › Immunoglobulin-like › Subtilisin-like superfamily | 0.50 | 31.0 | 3.65e-01 | 98.9% | 86.3% |
ECOD (20)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 185509 | 10.26.1.2 ↗ | beta sandwiches › jelly-roll › Histone H3 binding protein ORF158L › Histone H3 binding protein ORF158L › ORF158L-like | 0.61 | 35.0 | 3.94e-01 | 100.0% | 74.4% |
| 5015034 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.60 | 29.0 | 3.92e-01 | 100.0% | 85.0% |
| 4931876 | 11.1.1.1432 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF26259 | 0.60 | 28.0 | 3.69e-01 | 98.9% | 80.0% |
| 5032599 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 28.0 | 3.54e-01 | 100.0% | 80.9% |
| 3895339 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 30.0 | 3.73e-01 | 100.0% | 85.2% |
| 3584645 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 30.0 | 3.71e-01 | 100.0% | 86.1% |
| 5000210 | 11.1.1.14 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Glyco_hydro_2 | 0.53 | 29.0 | 3.72e-01 | 100.0% | 89.1% |
| 3860875 | 11.1.1.209 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › IL17R_fnIII_D2 | 0.53 | 28.0 | 3.14e-01 | 88.0% | 61.4% |
| 5083245 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 30.0 | 3.74e-01 | 100.0% | 90.0% |
| 5075136 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 26.0 | 3.45e-01 | 100.0% | 85.0% |
| 2396496 | 11.1.1.14 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Glyco_hydro_2 | 0.53 | 29.0 | 3.72e-01 | 100.0% | 90.0% |
| 1070874 | 11.1.1.300 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF4785_3rd | 0.52 | 26.0 | 3.36e-01 | 89.6% | 84.2% |
| 3905727 | 11.1.1.17 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Transglut_C | 0.52 | 29.0 | 3.44e-01 | 100.0% | 76.9% |
| 4991389 | 10.1.1.117 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Thermopsin | 0.51 | 38.0 | 3.38e-01 | 76.5% | 92.3% |
| 3897413 | 11.1.1.17 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Transglut_C | 0.51 | 28.0 | 3.52e-01 | 100.0% | 85.2% |
| 5061278 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 27.0 | 3.36e-01 | 100.0% | 81.7% |
| 2754126 | 11.1.1.85 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3_5 | 0.51 | 32.0 | 3.75e-01 | 100.0% | 89.1% |
| 3927701 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.50 | 30.0 | 3.33e-01 | 99.5% | 70.7% |
| 3904967 | 11.1.1.17 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Transglut_C | 0.50 | 28.0 | 3.52e-01 | 100.0% | 87.0% |
| 3252287 | 11.1.1.37 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › E1_DerP2_DerF2 | 0.50 | 28.0 | 3.34e-01 | 100.0% | 79.2% |
D3
medium
residues 231-300_335-383
Domain cluster:
rep: MF351863.1__ASR76073.1__PBI_BELLAMY_28__00026__D636-729_750-796