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MT408532.1__QJT70067.1__SynMITS9220M01_054__00051

Bact-Vir

MT408532.1__QJT70067.1__SynMITS9220M01_054__00051

Identity

Accession:
MT408532 ↗
Kingdom:
phage

Quality

92.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pantevenvirales› Kyanoviridae› Synechococcus_phage_SynMITS9220M01

TaxID: 2736186

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 13-136
PDB
Domain cluster: rep: MW960030.1__QWY82978.1__X__00024__D5-103
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1xw3A01 3.90.1530.10 Alpha Beta › Alpha-Beta Complex › Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, ParB domain › Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, ParB domain 0.73 53.0 5.93e-01 83.9% 95.8%
2hwjA01 3.90.1530.10 Alpha Beta › Alpha-Beta Complex › Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, ParB domain › Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, ParB domain 0.68 53.0 5.30e-01 87.1% 79.4%
1tcvA00 3.40.50.1580 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain 0.52 40.0 3.15e-01 83.1% 79.0%
ECOD (22)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4970064 876.1.1.1 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc 0.77 50.0 6.02e-01 74.2% 100.0%
4344404 876.1.1.1 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc 0.77 59.0 6.54e-01 96.0% 100.0%
4862436 876.1.1.1 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc 0.77 56.0 6.39e-01 86.3% 98.9%
3587492 876.1.1.1 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc 0.76 59.0 6.45e-01 91.9% 100.0%
5082449 876.1.1.1 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc 0.75 53.0 6.07e-01 87.9% 100.0%
7603 876.1.1.2 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc_2 0.74 49.0 5.71e-01 75.8% 95.3%
3966817 876.1.1.2 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc_2 0.73 49.0 5.77e-01 71.8% 98.8%
4393138 876.1.1.0 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin 0.73 60.0 6.14e-01 99.2% 90.0%
3772471 876.1.1.1 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc 0.73 51.0 5.94e-01 79.8% 100.0%
2387795 876.1.1.1 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc 0.73 48.0 5.62e-01 87.1% 96.6%
4370861 876.1.1.0 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin 0.73 58.0 6.07e-01 98.4% 94.5%
5083282 876.1.1.0 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin 0.72 56.0 6.12e-01 88.7% 100.0%
5053137 876.1.1.0 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin 0.71 53.0 5.15e-01 77.4% 84.4%
85732 876.1.1.1 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc 0.70 50.0 5.14e-01 82.3% 76.0%
5081788 876.1.1.4 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › DUF262 0.69 57.0 6.07e-01 95.2% 100.0%
5075504 876.1.1.4 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › DUF262 0.68 48.0 5.44e-01 78.2% 100.0%
3701649 876.1.1.0 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin 0.67 52.0 5.67e-01 87.9% 100.0%
5018770 876.1.1.4 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › DUF262 0.67 55.0 5.54e-01 86.3% 96.0%
5049804 876.1.1.0 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin 0.67 56.0 5.36e-01 88.7% 93.6%
4931669 876.1.1.0 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin 0.65 47.0 4.81e-01 74.2% 92.5%
5080912 876.1.1.9 ↗ a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › DndB 0.61 53.0 5.29e-01 94.4% 94.5%
3520294 2011.2.1.1 ↗ a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › PNP_UDP_1 0.51 41.0 3.26e-01 89.5% 79.3%
D2 high residues 149-209
PDB
Domain cluster: representative
CATH (20)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3e3vA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 58.0 6.02e-01 80.3% 91.1%
2ffjA01 1.10.8.380 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Uncharacterised protein PF01937, DUF89, domain 1 0.73 43.0 4.49e-01 72.1% 64.3%
4ad9A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 56.0 5.09e-01 88.5% 69.0%
2bnkA00 1.10.8.600 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Phage phi29 replication organiser protein p16.7-like 0.70 44.0 4.34e-01 78.7% 60.9%
2lw1A00 1.10.287.380 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Valyl-tRNA synthetase, C-terminal domain 0.68 47.0 4.22e-01 93.4% 51.8%
3vm9A02 6.10.140.2110 Special › Helix non-globular › Helix Hairpins › 0.67 50.0 5.15e-01 78.7% 84.2%
2zxqA06 1.20.1270.70 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Designed single chain three-helix bundle 0.65 42.0 4.15e-01 78.7% 62.1%
2ig3A00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.64 45.0 3.55e-01 73.8% 38.6%
3whjA00 6.10.140.1710 Special › Helix non-globular › Helix Hairpins › 0.63 52.0 4.23e-01 90.2% 76.6%
4abmD00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.61 47.0 4.34e-01 88.5% 64.9%
3t38A01 1.10.8.1060 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Corynebacterium glutamicum thioredoxin-dependent arsenate reductase, N-terminal domain 0.61 40.0 3.85e-01 75.4% 57.7%
3e22A03 1.10.287.600 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.61 47.0 4.95e-01 85.2% 94.4%
2btoA03 1.10.287.600 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.60 45.0 4.79e-01 83.6% 92.6%
3t6gB00 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.59 48.0 3.68e-01 86.9% 59.0%
6pw7A02 1.10.150.50 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 0.58 51.0 4.84e-01 96.7% 94.4%
1ithA00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.55 44.0 3.57e-01 96.7% 56.7%
3bbzA00 1.10.8.10 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain 0.55 36.0 3.98e-01 73.8% 85.4%
4heoA00 1.10.8.10 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain 0.55 38.0 4.06e-01 78.7% 81.8%
1lp1A00 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.54 38.0 4.05e-01 83.6% 83.6%
4kjmA02 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.51 35.0 3.74e-01 75.4% 80.0%
ECOD (28)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3355429 150.1.1.0 ↗ alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin 0.77 49.0 4.83e-01 93.4% 61.5%
3960278 3447.1.1.0 ↗ alpha bundles › Isoprenylcysteine carboxyl methyltransferase (ICMT) › Isoprenylcysteine carboxyl methyltransferase (ICMT) › Isoprenylcysteine carboxyl methyltransferase (ICMT) 0.73 53.0 3.50e-01 82.0% 20.0%
5057920 101.1.2.54 ↗ alpha arrays › HTH › HTH › winged helix domain › Penicillinase_R 0.72 58.0 5.27e-01 91.8% 84.7%
3243495 101.1.1.289 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HOCHOB 0.70 53.0 5.51e-01 88.5% 92.7%
4991386 2488.1.1.0 ↗ a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot 0.69 49.0 3.15e-01 82.0% 15.9%
3486504 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.69 51.0 5.30e-01 83.6% 90.9%
3243227 198.1.1.0 ↗ alpha arrays › Saposin-like › Saposin-like › Saposin-like 0.69 48.0 4.63e-01 73.8% 64.3%
3260418 5043.1.1.0 ↗ extended segments › Sensor proteins transmembrane domains › Htr2 transmembrane domain-like › Htr2 transmembrane domain-like 0.68 49.0 4.86e-01 77.0% 75.4%
3931083 101.1.1.75 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_48 0.66 48.0 5.12e-01 90.2% 98.0%
3657667 632.2.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Bacterial immunoglobulin/albumin-binding domains › Bacterial immunoglobulin/albumin-binding domains 0.66 43.0 4.54e-01 73.8% 74.5%
3506989 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.66 48.0 5.17e-01 88.5% 98.0%
3798329 3919.1.1.0 ↗ alpha duplicates or obligate multimers › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 0.66 52.0 4.46e-01 93.4% 59.1%
3626320 3919.1.1.2 ↗ alpha duplicates or obligate multimers › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 › COMM_HN 0.64 52.0 4.43e-01 95.1% 60.0%
3590408 5086.1.1.191 ↗ alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › CC_PcsB 0.64 50.0 4.23e-01 83.6% 52.0%
3240028 101.1.1.1 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.63 49.0 5.10e-01 93.4% 98.2%
3976126 1079.1.1.1 ↗ alpha complex topology › Transmembrane reductase CcdA › Transmembrane reductase CcdA › Transmembrane reductase CcdA › DsbD 0.62 47.0 3.21e-01 80.3% 67.0%
4279546 3636.1.1.0 ↗ a+b two layers › XPD arch domain › XPD arch domain › XPD arch domain 0.61 55.0 4.24e-01 100.0% 89.6%
3973765 564.1.1.3 ↗ alpha arrays › N-terminal, cytoplasmic domain of anti-sigma factors › N-terminal, cytoplasmic domain of anti-sigma factors › N-terminal, cytoplasmic domain of anti-sigma factors › DUF4880 0.61 48.0 4.84e-01 93.4% 90.0%
4331702 106.1.1.1 ↗ alpha arrays › Globin-like › Globin-like › Globin-like › Globin 0.60 45.0 3.51e-01 85.2% 52.3%
3496552 190.1.1.3 ↗ alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box_2 0.59 45.0 3.91e-01 80.3% 78.9%
4113086 7531.1.1.1 ↗ a/b three-layered sandwiches › Carbamate kinase-like › Carbamate kinase-like › Carbamate kinase-like › AA_kinase 0.59 45.0 3.05e-01 86.9% 32.3%
3505989 198.1.1.0 ↗ alpha arrays › Saposin-like › Saposin-like › Saposin-like 0.58 43.0 3.69e-01 83.6% 47.6%
5043828 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.58 50.0 3.04e-01 98.4% 25.9%
3172243 101.1.6.33 ↗ alpha arrays › HTH › HTH › TrpR › UBQLN1 0.56 38.0 4.00e-01 72.1% 92.7%
3237237 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.55 44.0 3.15e-01 88.5% 55.3%
3651135 3788.1.1.20 ↗ alpha bundles › Viral accessory protein x (Vpx) / viral protein r (Vpr) › Viral accessory protein x (Vpx) / viral protein r (Vpr) › Viral accessory protein x (Vpx) / viral protein r (Vpr) › VIN3_C 0.55 34.0 3.25e-01 70.5% 50.7%
3175234 605.1.1.0 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.54 43.0 3.73e-01 91.8% 55.8%
3431353 1128.1.1.10 ↗ alpha bundles › LYR protein › LYR protein › LYR protein › VIN3_C 0.53 34.0 3.29e-01 70.5% 55.7%
D3 high residues 218-329
PDB
Domain cluster: rep: MZ577098.1__QZI94961.1__Melnitz3EXVC039M_7__00006__D308-416
CATH (53)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1vjtA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.72 47.0 4.65e-01 85.7% 62.9%
2ymbA00 3.30.870.30 Alpha Beta › 2-Layer Sandwich › Endonuclease; Chain A › MITD, C-terminal phospholipase D-like domain 0.70 46.0 4.13e-01 85.7% 49.0%
1wy5A01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.69 43.0 3.48e-01 86.6% 32.3%
4a91A01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.67 45.0 4.06e-01 86.6% 50.7%
4fixA01 3.90.550.60 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › 0.66 42.0 2.85e-01 86.6% 17.4%
6tmvB01 3.50.7.10 Alpha Beta › 3-Layer(bba) Sandwich › GroEL › GroEL 0.66 46.0 4.09e-01 86.6% 50.0%
7uuim01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.66 44.0 3.92e-01 90.2% 48.1%
2efjA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.64 48.0 3.88e-01 90.2% 41.1%
7aooB01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.63 39.0 3.46e-01 88.4% 42.0%
2pidA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.63 51.0 4.00e-01 86.6% 46.5%
2a1iA01 3.40.50.10130 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.63 49.0 4.87e-01 100.0% 79.5%
3tnjA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.62 41.0 4.02e-01 86.6% 62.0%
2yhaA02 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.61 52.0 4.10e-01 92.9% 62.0%
4bj1A02 3.40.50.12060 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.60 47.0 4.34e-01 100.0% 64.2%
2x0kA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.60 45.0 3.84e-01 92.0% 47.8%
4r27B00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.60 53.0 3.63e-01 99.1% 87.0%
1h3fA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.59 40.0 3.37e-01 86.6% 39.5%
2fb6A00 3.40.1260.10 Alpha Beta › 3-Layer(aba) Sandwich › Hypothetical Protein Ychn; Chain: A, › DsrEFH-like 0.58 39.0 3.93e-01 87.5% 65.5%
4n9wA02 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.58 42.0 3.65e-01 100.0% 47.5%
2mzbA00 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.58 40.0 3.34e-01 84.8% 40.8%
4gicA01 3.40.50.1980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain 0.57 42.0 3.93e-01 92.0% 60.4%
2iw1A02 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.57 44.0 3.78e-01 100.0% 50.0%
2bd0A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.57 50.0 3.95e-01 97.3% 79.9%
2ex2A02 3.50.80.20 Alpha Beta › 3-Layer(bba) Sandwich › D-tyrosyl-trna(Tyr) Deacylase; Chain: A; › D-Ala-D-Ala carboxypeptidase C, peptidase S13 0.57 41.0 4.30e-01 92.0% 83.5%
3razA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.57 37.0 3.53e-01 92.0% 54.8%
5xc5A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.56 50.0 4.42e-01 98.2% 82.0%
1jilA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.56 45.0 3.61e-01 85.7% 60.6%
1u8xX01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.56 45.0 3.93e-01 85.7% 79.5%
3oy2A02 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.56 44.0 3.55e-01 100.0% 41.8%
3regA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.56 49.0 4.32e-01 98.2% 80.1%
6mv2A03 3.40.50.80 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module 0.56 39.0 3.68e-01 85.7% 60.0%
4uulA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.56 45.0 4.06e-01 86.6% 69.7%
3gl3D00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.55 40.0 3.82e-01 94.6% 62.8%
4grfA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.55 41.0 3.83e-01 94.6% 62.1%
2bgiA02 3.40.50.80 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module 0.55 44.0 3.96e-01 86.6% 76.6%
3i9v102 3.40.50.11540 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NADH-ubiquinone oxidoreductase 51kDa subunit 0.54 48.0 4.10e-01 97.3% 63.1%
2x9qB00 3.40.50.11710 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cyclodipeptide synthase 0.54 44.0 3.60e-01 90.2% 64.0%
2ap9B00 3.40.1160.10 Alpha Beta › 3-Layer(aba) Sandwich › Carbamate kinase › Acetylglutamate kinase-like 0.54 42.0 3.20e-01 85.7% 76.4%
1up7A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.54 43.0 4.05e-01 85.7% 70.1%
1j24A00 3.40.50.10130 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.54 46.0 4.43e-01 100.0% 80.5%
3erwF00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.53 40.0 3.80e-01 95.5% 67.2%
2j0wA01 3.40.1160.10 Alpha Beta › 3-Layer(aba) Sandwich › Carbamate kinase › Acetylglutamate kinase-like 0.53 48.0 3.99e-01 100.0% 86.9%
2hhcA02 3.40.50.11350 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.53 39.0 3.67e-01 92.0% 62.0%
4fo5A00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.53 42.0 4.00e-01 99.1% 72.1%
2f9sB00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.52 39.0 3.67e-01 93.8% 64.0%
5f2kB02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.52 46.0 3.76e-01 100.0% 94.9%
3hzrA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.51 45.0 3.50e-01 100.0% 71.1%
5hvmA02 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.51 44.0 3.71e-01 99.1% 54.3%
5jioA02 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.51 45.0 3.72e-01 100.0% 55.0%
5dxfA02 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.50 44.0 3.66e-01 99.1% 53.6%
2hyxA01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.50 45.0 3.75e-01 100.0% 61.7%
4mj7B00 3.40.50.1010 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 5'-nuclease 0.50 33.0 3.03e-01 90.2% 48.4%
3hczA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.50 40.0 3.71e-01 100.0% 66.7%
ECOD (64)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5036944 2005.1.1.11 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.68 44.0 3.25e-01 86.6% 26.2%
3885829 7516.1.1.37 ↗ a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › CHGN 0.67 48.0 3.57e-01 86.6% 29.6%
4064490 2484.1.1.26 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Piwi 0.66 55.0 4.10e-01 89.3% 50.9%
3322623 129.1.1.95 ↗ alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › Castor_Poll_mid 0.66 43.0 3.68e-01 92.0% 40.5%
3174284 2005.1.1.0 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.66 42.0 3.04e-01 87.5% 22.5%
4928434 7512.1.1.3 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 0.66 44.0 3.80e-01 87.5% 43.7%
4178958 2005.1.1.11 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.65 41.0 3.27e-01 86.6% 30.9%
3315370 2003.1.1.135 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Castor_Poll_mid 0.65 43.0 3.64e-01 92.0% 40.5%
3464663 2003.1.1.82 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Slo-like_RCK 0.65 43.0 3.82e-01 92.0% 46.9%
3923276 2484.1.1.26 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Piwi 0.64 53.0 3.95e-01 89.3% 67.0%
4928124 300.1.1.0 ↗ a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease 0.64 41.0 3.64e-01 86.6% 43.6%
3199315 7514.1.1.3 ↗ a/b three-layered sandwiches › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › NAD_binding_6 0.64 43.0 3.91e-01 85.7% 50.7%
4830163 2484.1.1.26 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Piwi 0.63 53.0 4.60e-01 90.2% 72.8%
3234687 2484.1.1.26 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Piwi 0.63 52.0 4.04e-01 90.2% 74.0%
3510301 7516.1.1.37 ↗ a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › CHGN 0.63 45.0 3.48e-01 86.6% 32.3%
1188317 2484.1.1.26 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Piwi 0.62 51.0 4.09e-01 89.3% 60.7%
3611845 2484.1.1.26 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Piwi 0.61 51.0 3.77e-01 89.3% 55.8%
3600530 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.61 54.0 4.42e-01 97.3% 75.6%
4001806 2005.1.1.36 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › SLC12 0.61 45.0 3.89e-01 86.6% 49.7%
3235952 2484.1.1.26 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Piwi 0.60 49.0 3.67e-01 89.3% 65.0%
3199938 7514.1.1.1 ↗ a/b three-layered sandwiches › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › NAD_binding_1 0.59 43.0 3.63e-01 85.7% 45.4%
3258324 2008.1.1.156 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PF29906 0.59 53.0 4.75e-01 100.0% 73.1%
4947552 7512.1.1.3 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 0.59 40.0 3.54e-01 99.1% 46.5%
4251513 2008.1.1.156 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PF29906 0.58 52.0 4.55e-01 100.0% 77.1%
5071973 2008.1.1.7 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › ERCC4 0.58 52.0 4.69e-01 100.0% 74.8%
4946826 7512.1.1.3 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 0.58 42.0 3.70e-01 98.2% 49.7%
3636585 2484.1.1.26 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Piwi 0.57 49.0 3.66e-01 96.4% 65.3%
4994861 7512.1.1.3 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 0.57 43.0 3.81e-01 100.0% 54.1%
3519632 2008.1.1.7 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › ERCC4 0.56 48.0 4.31e-01 100.0% 66.3%
5008608 2008.1.1.7 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › ERCC4 0.56 49.0 4.49e-01 97.3% 76.0%
5059471 7512.1.1.32 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_trans_1_4 0.56 44.0 3.52e-01 99.1% 42.3%
3658864 2004.1.1.56 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › NB-ARC 0.56 46.0 3.98e-01 98.2% 57.7%
5033707 2008.1.1.7 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › ERCC4 0.55 48.0 4.38e-01 100.0% 71.3%
4288654 2008.1.1.7 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › ERCC4 0.55 49.0 4.52e-01 99.1% 77.2%
3255743 2008.1.1.7 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › ERCC4 0.55 50.0 4.47e-01 100.0% 74.8%
5079855 2008.1.1.0 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.55 48.0 4.33e-01 100.0% 69.7%
3798456 2008.1.1.0 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.55 48.0 4.19e-01 97.3% 69.4%
3258866 132.1.1.0 ↗ alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) 0.55 47.0 2.91e-01 97.3% 25.5%
4953860 2008.1.1.7 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › ERCC4 0.54 47.0 4.26e-01 100.0% 69.0%
5045112 2008.1.1.7 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › ERCC4 0.54 47.0 4.20e-01 100.0% 67.5%
3664770 207.1.1.95 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_14 0.54 48.0 3.20e-01 100.0% 48.6%
5048593 2004.1.1.19 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.53 48.0 4.29e-01 100.0% 80.5%
3229274 7512.1.1.0 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase 0.53 42.0 3.78e-01 99.1% 60.0%
3220592 2008.1.1.7 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › ERCC4 0.53 46.0 4.14e-01 97.3% 73.8%
4945737 2008.1.1.7 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › ERCC4 0.53 46.0 4.18e-01 100.0% 69.7%
3726164 7514.1.1.3 ↗ a/b three-layered sandwiches › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › NAD_binding_6 0.53 47.0 3.98e-01 99.1% 70.0%
3694302 7512.1.1.54 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Alg14 0.53 42.0 3.29e-01 87.5% 48.8%
5032065 2008.1.1.7 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › ERCC4 0.53 47.0 4.41e-01 99.1% 79.3%
3265590 2003.1.5.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.53 46.0 3.73e-01 98.2% 69.3%
2070988 7512.1.1.6 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_20 0.53 46.0 3.70e-01 99.1% 50.2%
3736401 7514.1.1.3 ↗ a/b three-layered sandwiches › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › NAD_binding_6 0.52 42.0 3.73e-01 85.7% 63.7%
4046202 2003.1.1.18 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Mannitol_dh 0.52 46.0 3.83e-01 100.0% 74.6%
5043095 2008.1.1.16 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Mrr_cat 0.52 45.0 4.51e-01 95.5% 100.0%
3489889 2005.1.1.11 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.52 42.0 3.73e-01 86.6% 61.9%
3193824 7514.1.1.3 ↗ a/b three-layered sandwiches › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › NAD_binding_6 0.52 46.0 3.95e-01 99.1% 87.8%
3175506 7514.1.1.3 ↗ a/b three-layered sandwiches › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › NAD_binding_6 0.52 46.0 4.07e-01 99.1% 89.1%
3462340 7514.1.1.3 ↗ a/b three-layered sandwiches › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › NAD_binding_6 0.52 45.0 4.00e-01 99.1% 82.4%
3190848 2003.1.1.18 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Mannitol_dh 0.51 45.0 3.71e-01 100.0% 71.2%
3694550 7514.1.1.3 ↗ a/b three-layered sandwiches › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › NAD_binding_6 0.51 41.0 3.51e-01 85.7% 55.6%
5035600 2008.1.1.7 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › ERCC4 0.51 46.0 4.11e-01 100.0% 71.9%
4021011 7514.1.1.0 ↗ a/b three-layered sandwiches › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain 0.51 41.0 3.81e-01 86.6% 80.0%
4167818 2003.1.5.49 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_30 0.50 45.0 3.40e-01 100.0% 89.3%
3463915 2003.1.1.58 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › NAD_binding_4 0.50 44.0 2.99e-01 100.0% 57.6%
4926901 2003.4.1.1 ↗ a/b three-layered sandwiches › Rossmann-like › Tryptophan synthase beta subunit-like PLP-dependent enzymes › Tryptophan synthase beta subunit-like PLP-dependent enzymes › PALP 0.50 41.0 3.38e-01 89.3% 75.6%