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MT408532.1__QJT70090.1__SynMITS9220M01_077__00074
Bact-VirMT408532.1__QJT70090.1__SynMITS9220M01_077__00074
Identity
- Accession:
- MT408532 ↗
- Kingdom:
- phage
Quality
69.0
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Kyanoviridae›
Synechococcus_phage_SynMITS9220M01
TaxID: 2736186
Cluster
View cluster (7 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-56
Domain cluster:
rep: MK867354.2__QFG06265.1__SSCSM1_9__00009__D2-49
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ff3A00 | 3.30.1060.10 | Alpha Beta › 2-Layer Sandwich › Peptide Methionine Sulfoxide Reductase; Chain A › Peptide methionine sulphoxide reductase MsrA | 0.66 | 54.0 | 3.65e-01 | 96.1% | 62.6% |
| 4x9xA01 | 3.40.50.10170 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.62 | 46.0 | 3.29e-01 | 80.4% | 86.6% |
| 1jbjA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.61 | 43.0 | 3.84e-01 | 100.0% | 52.0% |
| 5vmzA03 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.60 | 43.0 | 4.63e-01 | 100.0% | 97.5% |
| 2wadA02 | 3.90.1310.10 | Alpha Beta › Alpha-Beta Complex › Penicillin-binding protein 2a (Domain 2) › Penicillin-binding protein 2a (Domain 2) | 0.60 | 44.0 | 3.27e-01 | 100.0% | 28.4% |
| 8ediA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 43.0 | 3.68e-01 | 100.0% | 47.3% |
| 1cs6A03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 46.0 | 3.74e-01 | 100.0% | 45.9% |
| 7ahsA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 46.0 | 3.95e-01 | 100.0% | 54.8% |
| 4gm2A00 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.57 | 42.0 | 2.94e-01 | 80.4% | 56.3% |
| 2o3iA01 | 3.40.1610.10 | Alpha Beta › 3-Layer(aba) Sandwich › CV3147-like fold › CV3147-like domain | 0.57 | 46.0 | 3.05e-01 | 92.2% | 40.7% |
| 5joeA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 45.0 | 3.76e-01 | 100.0% | 50.0% |
| 2eo1A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 44.0 | 3.63e-01 | 100.0% | 45.1% |
| 1jmtA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.56 | 46.0 | 3.84e-01 | 98.0% | 100.0% |
| 1vbkA01 | 3.30.70.1510 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › THUMP domain-like | 0.56 | 41.0 | 3.56e-01 | 80.4% | 81.9% |
| 2cpcA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 44.0 | 3.77e-01 | 100.0% | 52.9% |
| 3jr7A02 | 2.20.28.50 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › DegV, N-terminal domain, peripheral subdomain | 0.55 | 38.0 | 4.02e-01 | 100.0% | 100.0% |
| 1x44A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 44.0 | 3.61e-01 | 100.0% | 46.6% |
| 1t7vA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 43.0 | 3.63e-01 | 100.0% | 53.3% |
| 3n0aA02 | 2.60.40.1110 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 41.0 | 3.24e-01 | 100.0% | 96.3% |
| 2vvfA02 | 2.60.120.730 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 41.0 | 3.23e-01 | 100.0% | 50.0% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| None | — | 0.75 | 53.0 | 3.14e-01 | 74.5% | 50.8% | |
| 3962632 | 7504.1.1.3 ↗ | a/b three-layered sandwiches › ITPase-like › ITPase-like › ITPase-like › Maf | 0.67 | 46.0 | 3.40e-01 | 72.5% | 65.7% |
| 3847515 | 223.1.1.119 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › Intu_longin_2 | 0.67 | 49.0 | 3.28e-01 | 76.5% | 25.0% |
| 4386779 | 2004.1.1.429 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_15 | 0.66 | 54.0 | 3.25e-01 | 92.2% | 77.8% |
| 3281602 | 379.1.1.0 ↗ | few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors | 0.64 | 50.0 | 5.13e-01 | 100.0% | 93.8% |
| 1685013 | 304.1.1.3 ↗ | a+b two layers › Alpha-beta plaits › GHMP Kinase, C-terminal domain › GHMP Kinase, C-terminal domain › MDD_C | 0.63 | 45.0 | 3.20e-01 | 74.5% | 45.3% |
| 3378389 | 221.1.1.171 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Ubiquitin_TPR1 | 0.61 | 42.0 | 3.67e-01 | 100.0% | 46.3% |
| 3280061 | 2008.1.1.20 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Uma2 | 0.58 | 48.0 | 3.28e-01 | 96.1% | 26.6% |
| 3622513 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.56 | 48.0 | 4.60e-01 | 100.0% | 95.0% |
| 3997516 | 221.1.1.76 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA_2 | 0.55 | 44.0 | 3.64e-01 | 100.0% | 46.1% |
| 172281 | 304.1.1.1 ↗ | a+b two layers › Alpha-beta plaits › GHMP Kinase, C-terminal domain › GHMP Kinase, C-terminal domain › GHMP_kinases_C | 0.55 | 46.0 | 3.58e-01 | 100.0% | 92.7% |
| 5004080 | 886.1.1.2 ↗ | a+b duplicates or obligate multimers › Probable bacterial effector-binding domain › Probable bacterial effector-binding domain › Probable bacterial effector-binding domain › GyrI-like | 0.51 | 44.0 | 3.23e-01 | 100.0% | 82.9% |