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MT408532.1__QJT70156.1__SynMITS9220M01_143__00140
Bact-VirMT408532.1__QJT70156.1__SynMITS9220M01_143__00140
Identity
- Accession:
- MT408532 ↗
- Kingdom:
- phage
Quality
87.0
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Kyanoviridae›
Synechococcus_phage_SynMITS9220M01
TaxID: 2736186
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-224
Domain cluster:
rep: S16_GE16_scaffold_10741_prodigal-single.1__X__X__00210__D3-193
CATH (31)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1dz3A00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.66 | 33.0 | 4.26e-01 | 78.5% | 83.7% |
| 2jk1A00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.64 | 35.0 | 4.31e-01 | 83.0% | 83.3% |
| 2mr5A00 | 3.40.50.11230 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.62 | 36.0 | 4.45e-01 | 83.0% | 91.2% |
| 5ej8A02 | 3.40.50.1220 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › TPP-binding domain | 0.60 | 33.0 | 4.24e-01 | 81.2% | 92.1% |
| 4mcjG00 | 3.40.50.450 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.59 | 35.0 | 4.15e-01 | 81.6% | 84.4% |
| 3tbfA02 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.59 | 34.0 | 4.03e-01 | 81.6% | 82.6% |
| 3g68A02 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.57 | 32.0 | 3.82e-01 | 81.6% | 80.7% |
| 4c6sA00 | 3.40.50.10140 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Toll/interleukin-1 receptor homology (TIR) domain | 0.57 | 36.0 | 4.34e-01 | 83.0% | 96.5% |
| 1v4vA02 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.57 | 34.0 | 4.01e-01 | 81.2% | 83.4% |
| 4s1wB02 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.57 | 32.0 | 3.87e-01 | 82.1% | 82.2% |
| 2a0mA00 | 3.40.800.10 | Alpha Beta › 3-Layer(aba) Sandwich › Arginase; Chain A › Ureohydrolase domain | 0.57 | 48.0 | 4.35e-01 | 88.8% | 88.6% |
| 1vbfA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.57 | 37.0 | 3.72e-01 | 93.7% | 63.8% |
| 3knzA02 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.57 | 31.0 | 3.76e-01 | 81.6% | 80.1% |
| 5i7wA02 | 3.40.50.1100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.55 | 28.0 | 3.87e-01 | 74.4% | 95.6% |
| 4iscA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.55 | 37.0 | 4.41e-01 | 90.1% | 97.4% |
| 2l82A00 | 3.40.50.11230 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.55 | 36.0 | 4.20e-01 | 82.1% | 90.7% |
| 1p3y100 | 3.40.50.1950 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavin prenyltransferase-like | 0.55 | 39.0 | 4.37e-01 | 82.1% | 93.6% |
| 3pkiA01 | 3.40.50.1220 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › TPP-binding domain | 0.54 | 43.0 | 4.48e-01 | 98.2% | 89.7% |
| 3wstA04 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.54 | 33.0 | 4.09e-01 | 93.3% | 100.0% |
| 2x7jA02 | 3.40.50.1220 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › TPP-binding domain | 0.53 | 36.0 | 3.92e-01 | 100.0% | 83.0% |
| 3lk7A03 | 3.90.190.20 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Mur ligase, C-terminal domain | 0.53 | 33.0 | 4.00e-01 | 94.6% | 100.0% |
| 3hbmA02 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.53 | 31.0 | 3.85e-01 | 76.7% | 91.5% |
| 4c4aA03 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.53 | 34.0 | 4.12e-01 | 93.7% | 99.3% |
| 3ntvA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.53 | 41.0 | 4.25e-01 | 92.4% | 85.2% |
| 2vbfA02 | 3.40.50.1220 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › TPP-binding domain | 0.52 | 33.0 | 3.81e-01 | 99.6% | 85.9% |
| 6mprB01 | 3.40.1080.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaconate Coenzyme A-transferase › Glutaconate Coenzyme A-transferase | 0.52 | 38.0 | 3.92e-01 | 100.0% | 78.7% |
| 3ofkA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.52 | 42.0 | 4.43e-01 | 96.0% | 92.6% |
| 1ws6A00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.51 | 34.0 | 3.90e-01 | 93.7% | 87.7% |
| 1j6uA03 | 3.90.190.20 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Mur ligase, C-terminal domain | 0.51 | 31.0 | 3.81e-01 | 93.7% | 97.0% |
| 2rirA02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.51 | 32.0 | 3.88e-01 | 91.0% | 94.6% |
| 1c3pA00 | 3.40.800.20 | Alpha Beta › 3-Layer(aba) Sandwich › Arginase; Chain A › Histone deacetylase domain | 0.50 | 42.0 | 3.50e-01 | 87.0% | 80.1% |
ECOD (21)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5015818 | 2006.1.5.3 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Arginase/deacetylase › UPF0489 | 0.74 | 69.0 | 6.82e-01 | 98.2% | 99.6% |
| 4939011 | 2007.1.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg | 0.67 | 36.0 | 4.62e-01 | 81.6% | 90.4% |
| 3283157 | 2003.1.5.46 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › MTS | 0.63 | 30.0 | 3.98e-01 | 83.0% | 83.1% |
| 5053391 | 2496.1.1.0 ↗ | a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like | 0.62 | 34.0 | 4.39e-01 | 92.8% | 92.8% |
| 4177544 | 2007.1.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg | 0.60 | 35.0 | 4.30e-01 | 82.5% | 88.3% |
| 4553009 | 2003.1.4.10 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › DHS-like NAD/FAD-binding domain › TPP_enzyme_M_2 | 0.57 | 36.0 | 4.09e-01 | 100.0% | 82.4% |
| 3387124 | 7522.1.1.4 ↗ | a/b three-layered sandwiches › TK C-terminal domain-like › TK C-terminal domain-like › TK C-terminal domain-like › PFOR_II | 0.56 | 28.0 | 3.69e-01 | 82.1% | 87.7% |
| 4450120 | 2003.1.5.155 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › RrnaAD, Methyltransf_25 | 0.55 | 38.0 | 4.02e-01 | 95.5% | 77.0% |
| 4208334 | 2003.1.5.155 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › RrnaAD, Methyltransf_25 | 0.55 | 38.0 | 4.19e-01 | 94.6% | 85.4% |
| 5016839 | 2007.1.1.15 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like › DUF2124 | 0.55 | 32.0 | 3.71e-01 | 78.5% | 80.0% |
| None | — | 0.52 | 42.0 | 4.49e-01 | 96.0% | 94.5% | |
| 5024523 | 2004.1.1.29 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD | 0.52 | 37.0 | 3.62e-01 | 72.6% | 84.0% |
| 4519350 | 2003.1.5.2 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › RrnaAD | 0.52 | 38.0 | 3.86e-01 | 93.7% | 76.7% |
| 5023171 | 2003.1.5.2 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › RrnaAD | 0.51 | 39.0 | 4.10e-01 | 96.0% | 86.5% |
| 5004543 | 2003.1.5.22 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_Mtase | 0.51 | 37.0 | 3.31e-01 | 71.7% | 98.1% |
| 4946278 | 7522.1.1.0 ↗ | a/b three-layered sandwiches › TK C-terminal domain-like › TK C-terminal domain-like › TK C-terminal domain-like | 0.51 | 25.0 | 3.36e-01 | 81.2% | 87.0% |
| 3625379 | 2006.1.6.7 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › Sec23_trunk | 0.51 | 41.0 | 3.90e-01 | 82.5% | 99.2% |
| 4943190 | 2003.1.5.2 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › RrnaAD | 0.51 | 38.0 | 3.98e-01 | 94.6% | 82.4% |
| 3932771 | 2006.1.6.7 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › Sec23_trunk | 0.50 | 40.0 | 3.91e-01 | 82.5% | 97.6% |
| 5050277 | 2003.1.5.2 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › RrnaAD | 0.50 | 38.0 | 3.97e-01 | 96.0% | 84.4% |
| 3638307 | 2003.4.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Tryptophan synthase beta subunit-like PLP-dependent enzymes › Tryptophan synthase beta subunit-like PLP-dependent enzymes › PALP | 0.50 | 29.0 | 3.42e-01 | 89.7% | 82.0% |