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MT416612.2__QKE56443.1__X__00012
Bact-VirMT416612.2__QKE56443.1__X__00012
Identity
- Accession:
- MT416612 ↗
- Kingdom:
- phage
Quality
83.7
mean pLDDT
Taxonomy
TaxID: 2736257
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-87
Domain cluster:
representative
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4hehA01 | 1.10.1240.10 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain | 0.73 | 49.0 | 4.96e-01 | 100.0% | 68.7% |
| 3m7gA02 | 1.10.8.1010 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.69 | 48.0 | 4.60e-01 | 72.0% | 86.3% |
| 4adnA01 | 1.20.1280.250 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.69 | 44.0 | 4.44e-01 | 91.5% | 63.5% |
| 1q6aA00 | 1.10.1240.30 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › KaiA/RbsU domain | 0.68 | 47.0 | 4.35e-01 | 72.0% | 76.6% |
| 5lb3B02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.63 | 50.0 | 3.61e-01 | 85.4% | 58.3% |
| 3mzoB00 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.61 | 49.0 | 3.66e-01 | 87.8% | 72.4% |
| 2rd3D00 | 1.20.910.10 | Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like | 0.60 | 53.0 | 3.89e-01 | 97.6% | 77.1% |
| 6dv2G02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.59 | 47.0 | 3.59e-01 | 100.0% | 38.0% |
| 3lmfA00 | 1.20.1270.360 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.58 | 53.0 | 4.81e-01 | 100.0% | 100.0% |
| 2ahmG01 | 6.10.250.2820 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.58 | 41.0 | 3.83e-01 | 73.2% | 65.7% |
| 5ejrA01 | 1.25.40.530 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › MyTH4 domain | 0.57 | 41.0 | 3.13e-01 | 75.6% | 72.6% |
| 2oh3A01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.56 | 46.0 | 3.80e-01 | 87.8% | 86.8% |
| 2ip6A00 | 1.20.1440.140 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.56 | 50.0 | 4.91e-01 | 96.3% | 100.0% |
| 1xg2B00 | 1.20.140.40 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Invertase/pectin methylesterase inhibitor family protein | 0.56 | 51.0 | 4.14e-01 | 100.0% | 61.6% |
| 4nq0A00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.55 | 49.0 | 3.50e-01 | 100.0% | 36.6% |
| 2qwoB00 | 1.10.287.110 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain | 0.55 | 46.0 | 4.47e-01 | 100.0% | 83.7% |
| 3kavA00 | 1.20.1270.360 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.54 | 46.0 | 4.39e-01 | 100.0% | 96.1% |
| 2oduA02 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.54 | 45.0 | 4.15e-01 | 90.2% | 77.1% |
| 1bbhA00 | 1.20.120.10 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c/b562 | 0.52 | 41.0 | 3.61e-01 | 87.8% | 63.4% |
| 3bt5A00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.52 | 44.0 | 3.74e-01 | 100.0% | 70.2% |
| 5cy5B00 | 1.20.1200.10 | Mainly Alpha › Up-down Bundle › Hypothetical Protein Ta1238; Chain: A; › Cobalamin adenosyltransferase-like | 0.52 | 45.0 | 3.75e-01 | 100.0% | 79.9% |
| 4hfkB00 | 1.20.120.1620 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.50 | 43.0 | 4.02e-01 | 90.2% | 80.6% |
ECOD (34)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3302080 | 109.4.1.436 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Nipped-B_C | 0.68 | 53.0 | 3.20e-01 | 82.9% | 23.2% |
| 3886320 | 130.1.2.1 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › ribosome-binding domain of Mdm38 › LETM1_RBD | 0.68 | 60.0 | 4.65e-01 | 100.0% | 88.6% |
| 3525197 | 130.1.2.1 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › ribosome-binding domain of Mdm38 › LETM1_RBD | 0.67 | 59.0 | 4.58e-01 | 100.0% | 88.6% |
| 4956253 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.64 | 56.0 | 5.22e-01 | 100.0% | 95.2% |
| 3713784 | 632.7.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain | 0.63 | 53.0 | 5.29e-01 | 92.7% | 97.6% |
| 5008465 | 174.1.1.95 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › DUF7144 | 0.62 | 53.0 | 4.55e-01 | 100.0% | 96.4% |
| 3277630 | 633.21.1.0 ↗ | alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 | 0.60 | 54.0 | 4.54e-01 | 100.0% | 77.7% |
| 4957270 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.59 | 52.0 | 4.48e-01 | 100.0% | 80.0% |
| 5064587 | 109.3.1.488 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Helicase_dom4_arc | 0.58 | 52.0 | 4.33e-01 | 100.0% | 77.1% |
| 3998540 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.57 | 44.0 | 2.87e-01 | 82.9% | 41.5% |
| 3840516 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.57 | 44.0 | 3.32e-01 | 82.9% | 34.6% |
| 4663621 | 603.2.1.0 ↗ | alpha bundles › STAT-like › STAT › STAT | 0.56 | 47.0 | 4.06e-01 | 92.7% | 76.2% |
| 4156333 | 109.4.1.206 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › YfiO | 0.55 | 47.0 | 3.91e-01 | 96.3% | 84.7% |
| 3269731 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.55 | 45.0 | 4.04e-01 | 90.2% | 83.5% |
| 5026526 | 150.1.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin | 0.54 | 47.0 | 4.45e-01 | 100.0% | 95.0% |
| 3232098 | 174.1.1.13 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › DUF2700 | 0.54 | 48.0 | 4.14e-01 | 100.0% | 82.3% |
| 5001078 | 633.2.1.0 ↗ | alpha bundles › Bromodomain-like › Carnobacteriocin B2 immunity protein › Carnobacteriocin B2 immunity protein | 0.54 | 46.0 | 4.48e-01 | 100.0% | 87.4% |
| 3605145 | 603.1.1.97 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin, SNARE | 0.53 | 41.0 | 2.99e-01 | 85.4% | 84.0% |
| 3276672 | 604.3.1.1 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain › BAG | 0.53 | 45.0 | 3.86e-01 | 92.7% | 60.8% |
| 3545313 | 150.1.1.79 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › Piezo_TM1-24 | 0.53 | 47.0 | 4.02e-01 | 100.0% | 91.9% |
| 4050251 | 109.4.1.1627 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8, TPR_12, RapH_N | 0.53 | 42.0 | 2.75e-01 | 86.6% | 20.0% |
| 1693420 | 604.31.1.1 ↗ | alpha bundles › Spectrin repeat-like › F-actin-bundling protein ABP34 C-terminal domain › F-actin-bundling protein ABP34 C-terminal domain › F_actin_bund_C | 0.53 | 43.0 | 4.00e-01 | 89.0% | 86.7% |
| 3768138 | 106.1.1.0 ↗ | alpha arrays › Globin-like › Globin-like › Globin-like | 0.52 | 44.0 | 3.70e-01 | 93.9% | 53.1% |
| 3500031 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.52 | 44.0 | 4.16e-01 | 92.7% | 84.0% |
| 4954426 | 1075.5.1.4 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter › Polysacc_synt | 0.52 | 45.0 | 3.39e-01 | 98.8% | 48.1% |
| 5022179 | 632.3.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Phosphoprotein XD domain › Phosphoprotein XD domain | 0.52 | 47.0 | 4.33e-01 | 100.0% | 88.6% |
| 4015415 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.52 | 43.0 | 3.42e-01 | 92.7% | 46.9% |
| 3919843 | 604.1.1.124 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin_6 | 0.52 | 45.0 | 3.82e-01 | 93.9% | 72.3% |
| 4962834 | 5060.2.1.0 ↗ | alpha bundles › V-type ATP synthase subunit C › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain | 0.52 | 46.0 | 3.85e-01 | 97.6% | 58.6% |
| 3876247 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.52 | 43.0 | 3.83e-01 | 91.5% | 78.3% |
| 5000418 | 3646.1.1.1 ↗ | alpha complex topology › T-component of energy-coupling factor (ECF) transporters › T-component of energy-coupling factor (ECF) transporters › T-component of energy-coupling factor (ECF) transporters › CbiQ | 0.51 | 41.0 | 2.95e-01 | 86.6% | 82.9% |
| 3650959 | 109.4.1.1256 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3 | 0.51 | 38.0 | 2.85e-01 | 79.3% | 39.5% |
| 3988781 | 604.6.1.63 ↗ | alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain › DUF3169 | 0.51 | 38.0 | 3.26e-01 | 80.5% | 82.2% |
| 3733461 | 2485.1.1.0 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like | 0.50 | 41.0 | 3.14e-01 | 93.9% | 51.4% |