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MT416612.2__QKE56478.1__X__00042
Bact-VirMT416612.2__QKE56478.1__X__00042
Identity
- Accession:
- MT416612 ↗
- Kingdom:
- phage
Quality
94.9
mean pLDDT
Taxonomy
TaxID: 2736257
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-70
Domain cluster:
representative
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1vwxS01 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.69 | 53.0 | 5.27e-01 | 100.0% | 81.7% |
| 1m0wA02 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.61 | 40.0 | 3.49e-01 | 100.0% | 43.5% |
| 3ug9A02 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.60 | 43.0 | 3.05e-01 | 76.5% | 84.9% |
| 1wscA01 | 3.30.700.20 | Alpha Beta › 2-Layer Sandwich › Glycoprotein, Type 4 Pilin › Hypothetical protein ph0010; domain 1 | 0.58 | 49.0 | 3.83e-01 | 100.0% | 43.6% |
| 3holA01 | 2.40.128.250 | Mainly Beta › Beta Barrel › Lipocalin › | 0.56 | 49.0 | 4.61e-01 | 100.0% | 96.4% |
| 2hgsA02 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.56 | 39.0 | 3.37e-01 | 100.0% | 45.9% |
| 3e1uA00 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.56 | 47.0 | 3.57e-01 | 100.0% | 51.1% |
| 2nmlA00 | 3.30.2260.10 | Alpha Beta › 2-Layer Sandwich › ERH-like fold › Enhancer of rudimentary | 0.54 | 46.0 | 4.17e-01 | 100.0% | 70.0% |
| 7dryA01 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.54 | 47.0 | 3.49e-01 | 100.0% | 77.2% |
| 4oy6A00 | 2.70.50.50 | Mainly Beta › Distorted Sandwich › Coagulation Factor XIII; Chain A, domain 1 › chitin-binding protein cbp21 | 0.54 | 42.0 | 3.13e-01 | 100.0% | 31.7% |
| 2jwyA01 | 2.60.40.1620 | Mainly Beta › Sandwich › Immunoglobulin-like › Lipoprotein YajI-like | 0.54 | 43.0 | 3.48e-01 | 100.0% | 45.2% |
| 4hsaF02 | 2.60.40.2150 | Mainly Beta › Sandwich › Immunoglobulin-like › Interleukin-17 receptor A/B, fibronectin-III-like domain 2 | 0.53 | 41.0 | 3.62e-01 | 100.0% | 55.2% |
| 1ddvA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.53 | 43.0 | 3.91e-01 | 100.0% | 84.6% |
| 1itxA02 | 3.10.50.10 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.52 | 42.0 | 4.16e-01 | 94.1% | 100.0% |
| 2cuwA00 | 3.30.1280.10 | Alpha Beta › 2-Layer Sandwich › Mth169; Chain: A , › Phosphoribosylformylglycinamidine synthase subunit PurS | 0.52 | 46.0 | 4.32e-01 | 100.0% | 97.6% |
| 1cv8A00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.52 | 43.0 | 3.37e-01 | 100.0% | 41.6% |
| 3jyyA01 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.52 | 44.0 | 3.65e-01 | 100.0% | 56.0% |
| 2dtcA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.52 | 44.0 | 3.77e-01 | 98.5% | 80.2% |
| 3alxC02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 42.0 | 3.74e-01 | 100.0% | 61.2% |
| 3n77A00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.51 | 42.0 | 3.41e-01 | 94.1% | 92.9% |
| 5jp0A03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 44.0 | 3.65e-01 | 97.1% | 56.5% |
| 5mz2I00 | 3.30.190.10 | Alpha Beta › 2-Layer Sandwich › Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase › Ribulose bisphosphate carboxylase, small subunit | 0.51 | 39.0 | 3.20e-01 | 100.0% | 42.4% |
| 2rijA01 | 3.30.70.2010 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 43.0 | 3.35e-01 | 100.0% | 64.5% |
| 7pjjA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 44.0 | 3.60e-01 | 98.5% | 55.4% |
ECOD (27)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3281248 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.66 | 51.0 | 4.81e-01 | 100.0% | 70.0% |
| 3721982 | 304.14.1.0 ↗ | a+b two layers › Alpha-beta plaits › Sporulation related repeat (SPOR) › Sporulation related repeat (SPOR) | 0.65 | 56.0 | 5.07e-01 | 100.0% | 94.7% |
| 3598544 | 73.1.1.0 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain | 0.62 | 53.0 | 4.03e-01 | 100.0% | 94.9% |
| 3991647 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.61 | 49.0 | 4.07e-01 | 91.2% | 70.4% |
| 3508212 | 3115.1.1.6 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › DUF4494 | 0.60 | 47.0 | 4.69e-01 | 100.0% | 82.9% |
| 3397468 | 11.1.1.822 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF229 | 0.60 | 37.0 | 3.28e-01 | 100.0% | 40.0% |
| 3517068 | 3115.1.1.6 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › DUF4494 | 0.60 | 47.0 | 4.88e-01 | 100.0% | 89.2% |
| 3252771 | 821.1.1.0 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease | 0.60 | 44.0 | 4.15e-01 | 100.0% | 64.7% |
| 3274364 | 560.1.1.0 ↗ | few secondary structure elements › H-NS histone-like proteins, C-terminal domain › H-NS histone-like proteins, C-terminal domain › H-NS histone-like proteins, C-terminal domain | 0.59 | 38.0 | 4.27e-01 | 100.0% | 89.8% |
| 3219365 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.59 | 42.0 | 3.64e-01 | 100.0% | 48.6% |
| 3852865 | 2492.1.1.23 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › NAD2 | 0.59 | 46.0 | 3.39e-01 | 100.0% | 31.9% |
| 4032409 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 47.0 | 4.58e-01 | 100.0% | 82.7% |
| 4671238 | 821.1.1.1 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG | 0.56 | 41.0 | 2.94e-01 | 100.0% | 25.2% |
| 3592726 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 48.0 | 4.09e-01 | 100.0% | 57.4% |
| 3473329 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.56 | 43.0 | 4.30e-01 | 100.0% | 81.4% |
| 4029036 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.53 | 46.0 | 4.25e-01 | 100.0% | 73.3% |
| 4109626 | 1119.1.1.1 ↗ | a+b complex topology › 6-carboxyhexanoate-CoA ligase › 6-carboxyhexanoate-CoA ligase › 6-carboxyhexanoate-CoA ligase › BioW | 0.53 | 42.0 | 2.94e-01 | 89.7% | 86.3% |
| 3642558 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.53 | 41.0 | 3.95e-01 | 95.6% | 72.6% |
| 3484264 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.53 | 40.0 | 3.84e-01 | 100.0% | 71.2% |
| 3487745 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.52 | 46.0 | 3.31e-01 | 100.0% | 39.5% |
| 3880028 | 10.2.1.5 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › TGFb_propeptide | 0.52 | 44.0 | 3.03e-01 | 100.0% | 27.2% |
| 3746356 | 10.2.1.5 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › TGFb_propeptide | 0.52 | 44.0 | 3.06e-01 | 100.0% | 28.3% |
| 3738542 | 2004.1.1.250 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin,Microtub_bd | 0.52 | 45.0 | 2.78e-01 | 100.0% | 59.8% |
| 3399011 | 11.1.1.536 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF1091 | 0.51 | 45.0 | 3.56e-01 | 100.0% | 61.4% |
| 3788778 | 11.1.1.41 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_C | 0.51 | 44.0 | 3.26e-01 | 100.0% | 61.1% |
| 3396597 | 11.1.1.536 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF1091 | 0.50 | 44.0 | 3.33e-01 | 100.0% | 52.9% |
| 4018427 | 10.9.1.0 ↗ | beta sandwiches › jelly-roll › C-terminal domain of mullusc hemocyanin › C-terminal domain of mullusc hemocyanin | 0.50 | 45.0 | 4.02e-01 | 100.0% | 71.6% |