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MT416612.2__QKE56540.1__X__00151

Bact-Vir

MT416612.2__QKE56540.1__X__00151

Identity

Accession:
MT416612 ↗
Kingdom:
phage

Quality

70.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 26-76
PDB
Domain cluster: representative
CATH (41)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2w7nA00 1.10.10.2690 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.90 73.0 5.78e-01 100.0% 46.8%
2rn7A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.85 75.0 6.92e-01 100.0% 77.3%
4izzB02 1.10.10.1680 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › HetR, N-terminal DNA-binding domain 0.84 66.0 6.03e-01 100.0% 64.7%
1rr7A02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.83 61.0 6.31e-01 98.0% 85.4%
2f2cA02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.82 73.0 5.74e-01 100.0% 50.9%
3t0yA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 64.0 6.04e-01 100.0% 71.7%
3c57B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 63.0 6.49e-01 100.0% 87.8%
2e19A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.80 63.0 6.53e-01 96.1% 91.5%
2w9zA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.80 72.0 5.25e-01 100.0% 46.6%
4go1A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 65.0 6.42e-01 100.0% 85.2%
4fcyA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.79 67.0 5.94e-01 100.0% 65.4%
5z4zC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 62.0 5.14e-01 100.0% 50.0%
2lvsA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.78 62.0 6.04e-01 100.0% 80.4%
2cobA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.74 55.0 5.80e-01 96.1% 95.5%
4d7rA01 1.10.220.20 Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › 0.74 62.0 5.41e-01 100.0% 61.0%
3d5lA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 57.0 6.00e-01 90.2% 97.8%
4eqqA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 59.0 6.09e-01 92.2% 95.8%
1wi9A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 59.0 5.67e-01 100.0% 75.9%
4dllB02 1.10.1040.10 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.73 64.0 4.79e-01 100.0% 83.8%
3dteA02 1.10.10.1030 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › IrrE, HTH domain 0.73 54.0 5.74e-01 88.2% 100.0%
2mgqA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.73 62.0 5.70e-01 100.0% 88.2%
2uyyA02 1.10.1040.10 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.72 62.0 4.75e-01 100.0% 86.2%
1cxzB00 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.71 44.0 3.66e-01 82.4% 37.2%
1d2zA00 1.10.533.10 Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas 0.70 50.0 3.96e-01 76.5% 44.1%
2kt0A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.68 58.0 5.98e-01 96.1% 100.0%
1lvaA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 55.0 5.23e-01 100.0% 80.6%
1mkmB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 52.0 4.70e-01 100.0% 61.8%
4l8jA04 1.10.287.470 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.65 43.0 4.13e-01 100.0% 59.3%
1lp1A00 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.64 41.0 4.00e-01 86.3% 60.0%
2om6A02 1.10.150.400 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 0.64 55.0 4.80e-01 98.0% 87.3%
2x2vA00 1.20.20.10 Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C 0.63 44.0 4.06e-01 74.5% 75.0%
1zhcA00 6.10.280.50 Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.63 43.0 3.74e-01 88.2% 47.4%
3s63A00 1.10.225.10 Mainly Alpha › Orthogonal Bundle › NK-Lysin › Saposin-like 0.62 48.0 4.07e-01 86.3% 100.0%
1konA01 1.10.10.200 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Integrase, N-terminal zinc-binding domain 0.62 48.0 4.37e-01 94.1% 63.2%
1vfiA00 1.10.246.100 Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › Vanadium-binding protein 2 0.60 42.0 3.51e-01 74.5% 46.3%
1y9qA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.60 45.0 3.84e-01 90.2% 48.2%
3lcvB01 1.10.8.10 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain 0.59 39.0 3.79e-01 72.5% 61.4%
5xjnA00 1.10.630.10 Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 0.59 47.0 2.88e-01 100.0% 65.3%
2jvwA01 1.10.720.30 Mainly Alpha › Orthogonal Bundle › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › SAP domain 0.55 39.0 3.73e-01 98.0% 65.0%
3rq9A00 1.10.287.2500 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.53 47.0 4.09e-01 100.0% 87.2%
3ckcA02 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.53 47.0 3.21e-01 100.0% 59.3%
ECOD (63)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5052031 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.94 70.0 7.82e-01 78.4% 100.0%
5001937 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.93 81.0 7.94e-01 94.1% 87.3%
4995688 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.91 78.0 7.66e-01 94.1% 87.3%
3989416 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.90 66.0 7.29e-01 78.4% 100.0%
4949368 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.90 76.0 7.42e-01 94.1% 85.5%
4189523 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.90 73.0 7.71e-01 88.2% 100.0%
3503529 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.89 66.0 7.28e-01 78.4% 100.0%
3466087 101.1.1.253 alpha arrays › HTH › HTH › Three-helical HTH › HTH_CLF_N 0.88 71.0 7.21e-01 96.1% 90.0%
4983993 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.87 76.0 7.22e-01 100.0% 83.3%
3283752 101.1.1.13 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.86 79.0 6.28e-01 100.0% 53.7%
4240067 101.1.1.67 alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_6 0.86 76.0 6.67e-01 100.0% 69.3%
166741 101.1.1.13 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.85 75.0 5.85e-01 100.0% 47.2%
3277968 101.1.1.217 alpha arrays › HTH › HTH › Three-helical HTH › RsmI_C 0.85 75.0 7.31e-01 98.0% 90.9%
5002775 101.1.6.0 alpha arrays › HTH › HTH › TrpR 0.82 60.0 6.63e-01 100.0% 100.0%
5052346 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.82 70.0 6.68e-01 100.0% 83.3%
3707222 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.80 71.0 6.91e-01 100.0% 90.9%
3485420 101.1.1.1 alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.79 67.0 6.30e-01 100.0% 78.3%
3662725 101.1.1.217 alpha arrays › HTH › HTH › Three-helical HTH › RsmI_C 0.78 65.0 6.35e-01 94.1% 85.5%
3760172 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.78 65.0 5.57e-01 100.0% 58.7%
3560402 101.1.1.36 alpha arrays › HTH › HTH › Three-helical HTH › Homeobox_KN 0.78 65.0 6.01e-01 100.0% 72.3%
5000156 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.77 65.0 6.59e-01 98.0% 98.0%
3215991 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.77 70.0 6.39e-01 100.0% 78.5%
3293154 101.1.2.472 alpha arrays › HTH › HTH › winged helix domain › A_thal_3526 0.77 62.0 5.97e-01 100.0% 80.0%
3574083 101.1.1.1 alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.76 60.0 6.34e-01 90.2% 97.8%
4404513 101.1.1.1 alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.76 65.0 5.67e-01 100.0% 64.0%
3954237 532.2.1.16 alpha arrays › Type III secretion system domain-like › Type III secretion system domains › Type III secretion system domains › DUF732 0.76 66.0 5.76e-01 100.0% 65.0%
3454275 101.1.1.1 alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.75 61.0 6.24e-01 96.1% 92.0%
4996152 101.35.1.0 alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX 0.75 65.0 5.40e-01 100.0% 55.6%
5042980 101.35.1.41 alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › PF26555 0.75 62.0 6.26e-01 100.0% 98.0%
3341091 101.35.1.6 alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › A_thal_3526 0.75 60.0 5.62e-01 100.0% 73.8%
5013347 101.1.2.946 alpha arrays › HTH › HTH › winged helix domain › PF26555 0.75 58.0 6.03e-01 92.2% 100.0%
3955500 101.1.2.655 alpha arrays › HTH › HTH › winged helix domain › DUF732 0.74 65.0 5.68e-01 100.0% 83.3%
3829115 101.1.1.270 alpha arrays › HTH › HTH › Three-helical HTH › A_thal_3526 0.74 61.0 5.74e-01 100.0% 75.4%
4939640 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.74 64.0 6.06e-01 100.0% 81.7%
3740448 101.1.10.33 alpha arrays › HTH › HTH › Cyclin-like › Rrn7_cyclin_C 0.74 64.0 5.45e-01 100.0% 61.2%
3222400 101.1.10.0 alpha arrays › HTH › HTH › Cyclin-like 0.74 62.0 5.29e-01 100.0% 61.1%
4928805 101.1.2.233 alpha arrays › HTH › HTH › winged helix domain › NirdL-like_HTH 0.73 62.0 5.55e-01 100.0% 66.7%
3243454 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.73 58.0 5.54e-01 96.1% 76.7%
4970991 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 64.0 4.84e-01 100.0% 40.8%
5075678 2006.1.4.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like 0.73 63.0 4.13e-01 98.0% 99.5%
5042174 101.1.2.652 alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repr_C 0.73 59.0 4.47e-01 100.0% 36.3%
3284363 129.1.1.16 alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › NAD_binding_11 0.72 63.0 4.82e-01 100.0% 90.0%
4941656 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 61.0 5.33e-01 100.0% 65.0%
5004578 101.1.1.545 alpha arrays › HTH › HTH › Three-helical HTH › DUF1699 0.72 58.0 5.56e-01 98.0% 78.3%
4957080 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 62.0 6.09e-01 100.0% 90.9%
5069812 2004.1.1.22 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Sigma54_activat 0.70 56.0 3.61e-01 88.2% 20.6%
4169888 101.1.1.539 alpha arrays › HTH › HTH › Three-helical HTH › DUF434 0.70 55.0 3.71e-01 88.2% 44.5%
5021144 101.1.1.545 alpha arrays › HTH › HTH › Three-helical HTH › DUF1699 0.70 52.0 5.11e-01 86.3% 78.2%
3777242 3919.1.1.2 alpha duplicates or obligate multimers › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 › COMM_HN 0.68 59.0 4.54e-01 100.0% 45.8%
4983508 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.67 56.0 5.15e-01 98.0% 91.4%
5022243 195.1.1.1 alpha complex topology › NusB-like › NusB-like › NusB-like › NusB 0.67 53.0 3.99e-01 94.1% 60.7%
5052426 101.1.2.21 alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repress 0.67 56.0 4.26e-01 100.0% 48.9%
5001590 101.35.1.0 alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX 0.66 56.0 5.55e-01 100.0% 94.5%
4375034 7000.1.1.0 alpha arrays › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS 0.66 56.0 5.47e-01 96.1% 98.2%
3931388 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.66 52.0 5.17e-01 100.0% 87.3%
3965372 195.1.1.0 alpha complex topology › NusB-like › NusB-like › NusB-like 0.65 54.0 4.27e-01 100.0% 65.8%
4952257 3567.1.1.0 a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer 0.62 56.0 4.41e-01 100.0% 76.9%
3493041 3796.1.1.2 alpha arrays › Iron-regulated surface determinant protein H linker domain › Iron-regulated surface determinant protein H linker domain › Iron-regulated surface determinant protein H linker domain › GRIP 0.58 44.0 4.22e-01 84.3% 70.7%
3522864 604.1.1.1 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin 0.58 39.0 3.12e-01 74.5% 32.7%
3487676 548.1.1.0 alpha duplicates or obligate multimers › GRIP domain › GRIP domain › GRIP domain 0.55 41.0 3.89e-01 98.0% 67.8%
3577242 604.1.1.1 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin 0.55 44.0 3.45e-01 88.2% 75.5%
3245973 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.55 45.0 2.72e-01 98.0% 41.6%
3173846 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.53 38.0 2.74e-01 84.3% 24.3%