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MT422786.1__QKN88192.1__Novomoskovsk_4__00004
Bact-VirMT422786.1__QKN88192.1__Novomoskovsk_4__00004
Identity
- Accession:
- MT422786 ↗
- Kingdom:
- phage
Quality
87.7
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Ehrlichviridae›
Andromedavirus›
Bacillus_phage_Novomoskovsk
TaxID: 2736258
Cluster
View cluster (3 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-83
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1wc1C00 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.59 | 48.0 | 3.68e-01 | 89.0% | 96.4% |
| 2w01B00 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.59 | 50.0 | 3.83e-01 | 93.9% | 93.4% |
| 5oyhD00 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.56 | 47.0 | 3.63e-01 | 93.9% | 95.7% |
| 6wy9B02 | 2.40.110.10 | Mainly Beta › Beta Barrel › Butyryl-CoA Dehydrogenase, subunit A; domain 2 › Butyryl-CoA Dehydrogenase, subunit A, domain 2 | 0.55 | 46.0 | 4.47e-01 | 96.3% | 95.8% |
| 4ojdH01 | 2.60.98.60 | Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › Cell-cell fusogen EFF/AFF, domain 1 | 0.52 | 39.0 | 3.24e-01 | 82.9% | 86.0% |
| 3g88A00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.52 | 44.0 | 3.19e-01 | 92.7% | 73.6% |
| 4mi0A00 | 2.170.270.10 | Mainly Beta › Beta Complex › Beta-clip-like › SET domain | 0.52 | 42.0 | 3.19e-01 | 91.5% | 55.8% |
| 3dcxA00 | 2.30.29.50 | Mainly Beta › Roll › PH-domain like › Bacterial Pleckstrin homology domain | 0.52 | 31.0 | 2.77e-01 | 93.9% | 41.9% |
| 6kf9G01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 35.0 | 3.56e-01 | 72.0% | 80.5% |
| 2bkyX00 | 3.30.110.20 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain | 0.51 | 40.0 | 3.99e-01 | 89.0% | 93.0% |
| 3lb9A00 | 2.60.120.180 | Mainly Beta › Sandwich › Jelly Rolls › Glycoside hydrolase family 11/12, catalytic domain | 0.50 | 40.0 | 3.21e-01 | 90.2% | 89.6% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4117538 | 237.1.1.5 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › RolB_RolC | 0.60 | 52.0 | 4.50e-01 | 100.0% | 87.4% |
| 3289349 | 304.48.1.4 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Guanylate_cyc | 0.59 | 48.0 | 3.58e-01 | 90.2% | 76.7% |
| 4963846 | 2485.1.1.167 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › HTH_63 | 0.57 | 41.0 | 3.59e-01 | 79.3% | 77.9% |
| 4379611 | 304.102.1.6 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N,TruB_C_2 | 0.55 | 47.0 | 3.39e-01 | 92.7% | 61.7% |
| 135359 | 220.1.1.17 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_1 | 0.55 | 33.0 | 2.93e-01 | 93.9% | 39.2% |
| 4934883 | 2003.1.5.209 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › PF29244 | 0.54 | 44.0 | 3.51e-01 | 90.2% | 76.2% |
| 3823787 | 220.1.1.74 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PIG-H | 0.53 | 30.0 | 2.54e-01 | 93.9% | 32.9% |
| 5001552 | 220.1.1.76 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_2 | 0.53 | 32.0 | 3.05e-01 | 93.9% | 51.6% |
| 4997715 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.53 | 42.0 | 3.36e-01 | 86.6% | 52.4% |
| 4393127 | 12.1.1.44 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Glyco_hydro_5_C | 0.53 | 45.0 | 4.09e-01 | 96.3% | 80.0% |
| 3269042 | 220.1.1.74 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PIG-H | 0.53 | 31.0 | 2.75e-01 | 93.9% | 40.9% |
| 3479172 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.52 | 40.0 | 3.98e-01 | 90.2% | 78.8% |
| 4935578 | 4052.1.1.1 ↗ | beta complex topology › Acyl-CoA dehydrogenase middle domain-like › Acyl-CoA dehydrogenase middle domain-like › Acyl-CoA dehydrogenase middle domain-like › Acyl-CoA_dh_M | 0.52 | 45.0 | 4.10e-01 | 100.0% | 92.2% |
| 3412680 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.52 | 41.0 | 3.70e-01 | 87.8% | 65.2% |
| 4012616 | 220.1.1.74 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PIG-H | 0.50 | 31.0 | 2.76e-01 | 93.9% | 43.5% |
| 4214302 | 1.1.9.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg | 0.50 | 44.0 | 3.27e-01 | 100.0% | 43.6% |