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MT426122.1__QLF85107.1__X__00057
Bact-VirMT426122.1__QLF85107.1__X__00057
Identity
- Accession:
- MT426122 ↗
- Kingdom:
- phage
Quality
70.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 18-74
Domain cluster:
representative
CATH (33)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1h10A00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.67 | 50.0 | 3.97e-01 | 80.7% | 42.7% |
| 1wgqA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.66 | 47.0 | 3.85e-01 | 77.2% | 43.1% |
| 3hz4A00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.65 | 48.0 | 3.83e-01 | 80.7% | 76.7% |
| 3fogA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.64 | 52.0 | 4.40e-01 | 93.0% | 90.2% |
| 4a2bA03 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.63 | 46.0 | 3.98e-01 | 78.9% | 51.6% |
| 4p6zM01 | 3.30.450.60 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.63 | 54.0 | 4.30e-01 | 100.0% | 62.0% |
| 2kpiA01 | 2.20.25.10 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.63 | 37.0 | 4.32e-01 | 100.0% | 87.2% |
| 3d5lB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 47.0 | 3.93e-01 | 100.0% | 46.1% |
| 4gdxA02 | 1.10.246.130 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › Gamma-glutamyltranspeptidase, large (L) subunit, C-terminal domain | 0.63 | 43.0 | 3.47e-01 | 71.9% | 77.5% |
| 3dmlA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.63 | 44.0 | 3.80e-01 | 75.4% | 98.9% |
| 3cynB00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.61 | 43.0 | 3.15e-01 | 75.4% | 76.9% |
| 3noyB02 | 3.30.413.10 | Alpha Beta › 2-Layer Sandwich › Sulfite Reductase Hemoprotein; domain 1 › Sulfite Reductase Hemoprotein, domain 1 | 0.60 | 40.0 | 3.51e-01 | 71.9% | 42.1% |
| 1sazA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.60 | 44.0 | 3.17e-01 | 80.7% | 30.7% |
| 2w35A00 | 3.30.2170.10 | Alpha Beta › 2-Layer Sandwich › archaeoglobus fulgidus dsm 4304 fold › archaeoglobus fulgidus dsm 4304 superfamily | 0.60 | 49.0 | 3.36e-01 | 94.7% | 27.4% |
| 1e3hA03 | 3.30.230.70 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › GHMP Kinase, N-terminal domain | 0.59 | 43.0 | 2.97e-01 | 80.7% | 36.6% |
| 1k8kD02 | 3.30.1460.20 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.57 | 43.0 | 3.43e-01 | 84.2% | 64.1% |
| 2vugA02 | 3.30.1490.70 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › | 0.57 | 43.0 | 3.98e-01 | 80.7% | 79.2% |
| 2kcwA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.57 | 41.0 | 3.08e-01 | 77.2% | 63.3% |
| 3df7A02 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.56 | 43.0 | 3.25e-01 | 82.5% | 47.4% |
| 2d0oB00 | 3.40.50.10150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › B12-dependent dehydatase associated subunit | 0.56 | 47.0 | 3.81e-01 | 91.2% | 95.4% |
| 5mmiG01 | 3.90.930.12 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 | 0.55 | 41.0 | 3.64e-01 | 80.7% | 88.1% |
| 3udfA01 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.55 | 43.0 | 2.73e-01 | 94.7% | 93.5% |
| 3bu2A02 | 3.30.1940.10 | Alpha Beta › 2-Layer Sandwich › Nucleic acid-binding protein fold › YtpR-like | 0.54 | 34.0 | 3.19e-01 | 100.0% | 52.2% |
| 5ddtA00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.53 | 46.0 | 3.11e-01 | 100.0% | 87.1% |
| 3orqA02 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.52 | 38.0 | 2.66e-01 | 80.7% | 37.9% |
| 1lucA00 | 3.20.20.30 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Luciferase-like domain | 0.52 | 37.0 | 2.40e-01 | 78.9% | 35.0% |
| 1yfmA02 | 1.20.200.10 | Mainly Alpha › Up-down Bundle › Fumarase C; Chain A, domain 2 › Fumarase/aspartase (Central domain) | 0.52 | 46.0 | 2.94e-01 | 100.0% | 46.5% |
| 1tj7A02 | 1.20.200.10 | Mainly Alpha › Up-down Bundle › Fumarase C; Chain A, domain 2 › Fumarase/aspartase (Central domain) | 0.51 | 45.0 | 2.88e-01 | 100.0% | 42.3% |
| 5i47B03 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.51 | 38.0 | 3.26e-01 | 80.7% | 51.6% |
| 2hqvA00 | 3.40.1570.10 | Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › HemS/ChuS/ChuX like domains | 0.51 | 41.0 | 3.00e-01 | 94.7% | 82.0% |
| 4g59B00 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.50 | 44.0 | 3.19e-01 | 100.0% | 41.1% |
| 2yyzA02 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.50 | 40.0 | 4.05e-01 | 100.0% | 89.7% |
| 8gtyA02 | 3.30.420.150 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Exopolyphosphatase. Domain 2 | 0.50 | 41.0 | 2.99e-01 | 98.2% | 31.2% |
ECOD (41)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5046813 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.72 | 54.0 | 4.25e-01 | 80.7% | 40.9% |
| 4961481 | 4325.1.1.0 ↗ | mixed a+b and a/b › YegP-like › YegP-like › YegP-like | 0.71 | 56.0 | 5.26e-01 | 87.7% | 92.9% |
| 5038596 | 2485.1.1.0 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like | 0.71 | 50.0 | 3.75e-01 | 75.4% | 76.4% |
| 4341865 | 4325.1.1.1 ↗ | mixed a+b and a/b › YegP-like › YegP-like › YegP-like › DUF1508 | 0.67 | 53.0 | 5.45e-01 | 89.5% | 94.5% |
| 3710528 | 2485.1.1.0 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like | 0.66 | 47.0 | 3.64e-01 | 77.2% | 68.6% |
| 5055771 | 3407.1.1.0 ↗ | mixed a+b and a/b › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain | 0.66 | 46.0 | 3.72e-01 | 75.4% | 46.7% |
| 4940035 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.66 | 57.0 | 4.66e-01 | 100.0% | 62.7% |
| 4968411 | 3407.1.1.0 ↗ | mixed a+b and a/b › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain | 0.65 | 44.0 | 3.55e-01 | 70.2% | 47.8% |
| 4039156 | 2484.1.1.174 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH | 0.63 | 44.0 | 3.62e-01 | 75.4% | 45.5% |
| 4955569 | 873.1.1.1 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › V4R | 0.62 | 38.0 | 2.67e-01 | 80.7% | 20.0% |
| 4443103 | 296.1.1.3 ↗ | a+b three layers › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 › PF26540 | 0.62 | 45.0 | 3.69e-01 | 78.9% | 53.6% |
| 4642817 | 3326.1.1.1 ↗ | alpha arrays › DNA-binding domain in UvrA › DNA-binding domain in UvrA › DNA-binding domain in UvrA › UvrA_DNA-bind | 0.62 | 45.0 | 3.64e-01 | 80.7% | 70.0% |
| 3198727 | 220.1.1.121 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_SLA1 | 0.61 | 44.0 | 3.46e-01 | 80.7% | 36.7% |
| 3260429 | 7556.1.1.1 ↗ | a/b three-layered sandwiches › Fe-only hydrogenase › Fe-only hydrogenase › Fe-only hydrogenase › Fe_hyd_lg_C | 0.61 | 50.0 | 3.07e-01 | 91.2% | 58.4% |
| 4229028 | 2484.1.1.12 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Acetate_kinase | 0.61 | 43.0 | 2.73e-01 | 77.2% | 34.6% |
| 3480535 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.60 | 44.0 | 3.59e-01 | 80.7% | 41.9% |
| 4322675 | 220.1.1.121 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_SLA1 | 0.60 | 43.0 | 3.49e-01 | 80.7% | 40.0% |
| 5011985 | 2484.2.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Methylated DNA-protein cysteine methyltransferase domain › Methylated DNA-protein cysteine methyltransferase domain | 0.59 | 42.0 | 3.96e-01 | 75.4% | 61.4% |
| 4967562 | 7516.1.1.1 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › NTP_transferase | 0.59 | 41.0 | 2.76e-01 | 73.7% | 42.2% |
| 3520192 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.58 | 41.0 | 3.01e-01 | 77.2% | 65.6% |
| 3276072 | 220.1.1.7 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › IRS | 0.58 | 40.0 | 3.25e-01 | 71.9% | 82.9% |
| 3742310 | 5.1.4.38 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › ANAPC1 | 0.57 | 50.0 | 3.12e-01 | 98.2% | 22.0% |
| 4934918 | 331.2.1.0 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain | 0.57 | 41.0 | 3.80e-01 | 100.0% | 61.4% |
| 5069545 | 2484.1.1.43 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Endonuclease_5 | 0.56 | 44.0 | 3.13e-01 | 96.5% | 25.9% |
| 4980224 | 324.1.1.1 ↗ | a+b two layers › OsmC-like › OsmC-like › OsmC-like › OsmC | 0.55 | 45.0 | 3.58e-01 | 93.0% | 51.2% |
| 3498480 | 375.4.1.5 ↗ | few secondary structure elements › Rubredoxin-like › Nucleolar RNA-binding protein Nop10-like › Nucleolar RNA-binding protein Nop10-like › RPA_interact_C | 0.55 | 45.0 | 4.15e-01 | 100.0% | 98.8% |
| 4513459 | 7516.1.1.5 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › IspD | 0.55 | 46.0 | 3.17e-01 | 100.0% | 85.1% |
| 4352331 | 101.1.2.788 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF29760 | 0.54 | 38.0 | 3.38e-01 | 77.2% | 82.2% |
| 4333148 | 2003.1.3.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO | 0.53 | 45.0 | 3.08e-01 | 100.0% | 93.9% |
| 4484289 | 633.23.1.9 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › SUR7 | 0.53 | 39.0 | 2.74e-01 | 78.9% | 70.0% |
| 3578805 | 311.1.1.2 ↗ | a+b three layers › Phoshotransferase/anion transport protein › Phoshotransferase/anion transport protein › Phoshotransferase/anion transport protein › Band_3_cyto | 0.53 | 33.0 | 2.69e-01 | 80.7% | 31.8% |
| 1842546 | 1093.1.1.1 ↗ | a+b two layers › DUF4479 › DUF4479 › DUF4479 › DUF4479 | 0.53 | 33.0 | 2.95e-01 | 100.0% | 42.9% |
| 3998700 | 3998.1.1.1 ↗ | alpha arrays › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Peptidase inhibitors family I29 › Inhibitor_I29 | 0.52 | 46.0 | 4.14e-01 | 98.2% | 93.8% |
| None | — | 0.52 | 47.0 | 2.97e-01 | 100.0% | 47.5% | |
| 4338987 | 602.1.1.1 ↗ | alpha arrays › L-aspartase middle domain-like › L-aspartase middle domain-like › L-aspartase middle domain-like › Lyase_1 | 0.52 | 45.0 | 2.96e-01 | 100.0% | 46.7% |
| 3400142 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.52 | 37.0 | 2.40e-01 | 80.7% | 84.3% |
| 3528398 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.52 | 43.0 | 2.97e-01 | 93.0% | 36.2% |
| 4965842 | 2003.1.5.13 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Spermine_synth | 0.51 | 46.0 | 2.92e-01 | 100.0% | 23.7% |
| 5027341 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.51 | 43.0 | 3.13e-01 | 94.7% | 95.0% |
| 3649769 | 1.1.1.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Pol_BBD | 0.50 | 36.0 | 3.10e-01 | 80.7% | 75.0% |
| 5013210 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.50 | 34.0 | 2.99e-01 | 71.9% | 70.5% |